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path: root/gnu/packages/bioconductor.scm
AgeCommit message (Expand)Author
2022-10-06gnu: Add r-dada2....* gnu/packages/bioconductor.scm (r-dada2): New variable. Ricardo Wurmus
2022-10-03gnu: r-tximeta: Update to 1.14.1....* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.14.1. Ricardo Wurmus
2022-10-03gnu: r-bionero: Update to 1.4.2....* gnu/packages/bioconductor.scm (r-bionero): Update to 1.4.2. [propagated-inputs]: Remove r-deseq2 and r-ggpubr; add r-ggrepel and r-patchwork. Ricardo Wurmus
2022-10-03gnu: r-biodb: Update to 1.4.2....* gnu/packages/bioconductor.scm (r-biodb): Update to 1.4.2. Ricardo Wurmus
2022-10-03gnu: r-biocdockermanager: Update to 1.8.1....* gnu/packages/bioconductor.scm (r-biocdockermanager): Update to 1.8.1. Ricardo Wurmus
2022-10-03gnu: r-basilisk: Update to 1.8.1....* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.8.1. Ricardo Wurmus
2022-10-03gnu: r-bgeecall: Update to 1.12.2....* gnu/packages/bioconductor.scm (r-bgeecall): Update to 1.12.2. Ricardo Wurmus
2022-10-03gnu: r-pathview: Update to 1.36.1....* gnu/packages/bioconductor.scm (r-pathview): Update to 1.36.1. Ricardo Wurmus
2022-10-03gnu: r-delayedmatrixstats: Update to 1.18.1....* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.18.1. Ricardo Wurmus
2022-10-03gnu: r-scran: Update to 1.24.1....* gnu/packages/bioconductor.scm (r-scran): Update to 1.24.1. Ricardo Wurmus
2022-10-03gnu: r-scuttle: Update to 1.6.3....* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.6.3. Ricardo Wurmus
2022-10-03gnu: r-hdf5array: Update to 1.24.2....* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.24.2. Ricardo Wurmus
2022-10-03gnu: r-biocpkgtools: Update to 1.14.1....* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.14.1. Ricardo Wurmus
2022-10-03gnu: r-biocviews: Update to 1.64.1....* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.64.1. Ricardo Wurmus
2022-10-03gnu: r-bioccheck: Update to 1.32.1....* gnu/packages/bioconductor.scm (r-bioccheck): Update to 1.32.1. Ricardo Wurmus
2022-10-03gnu: r-cytoml: Update to 2.8.1....* gnu/packages/bioconductor.scm (r-cytoml): Update to 2.8.1. Ricardo Wurmus
2022-10-03gnu: r-opencyto: Update to 2.8.4....* gnu/packages/bioconductor.scm (r-opencyto): Update to 2.8.4. Ricardo Wurmus
2022-10-03gnu: r-flowstats: Update to 4.8.2....* gnu/packages/bioconductor.scm (r-flowstats): Update to 4.8.2. Ricardo Wurmus
2022-10-03gnu: r-flowviz: Update to 1.60.2....* gnu/packages/bioconductor.scm (r-flowviz): Update to 1.60.2. Ricardo Wurmus
2022-10-03gnu: r-ggcyto: Update to 1.24.1....* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.24.1. Ricardo Wurmus
2022-10-03gnu: r-ncdfflow: Update to 2.42.1....* gnu/packages/bioconductor.scm (r-ncdfflow): Update to 2.42.1. Ricardo Wurmus
2022-10-03gnu: r-rsubread: Update to 2.10.5....* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.10.5. Ricardo Wurmus
2022-10-03gnu: r-rgadem: Update to 2.44.1....* gnu/packages/bioconductor.scm (r-rgadem): Update to 2.44.1. Ricardo Wurmus
2022-10-03gnu: r-enrichplot: Update to 1.16.2....* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.16.2. Ricardo Wurmus
2022-10-03gnu: r-dose: Update to 3.22.1....* gnu/packages/bioconductor.scm (r-dose): Update to 3.22.1. Ricardo Wurmus
2022-10-03gnu: r-residualmatrix: Update to 1.6.1....* gnu/packages/bioconductor.scm (r-residualmatrix): Update to 1.6.1. Ricardo Wurmus
2022-10-03gnu: r-ggtree: Update to 3.4.4....* gnu/packages/bioconductor.scm (r-ggtree): Update to 3.4.4. Ricardo Wurmus
2022-10-03gnu: r-treeio: Update to 1.20.2....* gnu/packages/bioconductor.scm (r-treeio): Update to 1.20.2. Ricardo Wurmus
2022-10-03gnu: r-scaledmatrix: Update to 1.4.1....* gnu/packages/bioconductor.scm (r-scaledmatrix): Update to 1.4.1. Ricardo Wurmus
2022-10-03gnu: r-diffbind: Update to 3.6.4....* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.6.4. Ricardo Wurmus
2022-10-03gnu: r-zellkonverter: Update to 1.6.5....* gnu/packages/bioconductor.scm (r-zellkonverter): Update to 1.6.5. Ricardo Wurmus
2022-10-03gnu: r-limma: Update to 3.52.4....* gnu/packages/bioconductor.scm (r-limma): Update to 3.52.4. Ricardo Wurmus
2022-10-03gnu: r-genomicfeatures: Update to 1.48.4....* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.48.4. Ricardo Wurmus
2022-10-03gnu: r-genomeinfodb: Update to 1.32.4....* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.32.4. Ricardo Wurmus
2022-10-03gnu: r-gage: Update to 2.46.1....* gnu/packages/bioconductor.scm (r-gage): Update to 2.46.1. Ricardo Wurmus
2022-10-03gnu: r-complexheatmap: Update to 2.12.1....* gnu/packages/bioconductor.scm (r-complexheatmap): Update to 2.12.1. Ricardo Wurmus
2022-10-03gnu: r-chipseeker: Update to 1.32.1....* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.32.1. [propagated-inputs]: Add r-ggvenndiagram. Ricardo Wurmus
2022-10-03gnu: r-biostrings: Update to 2.64.1....* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.64.1. Ricardo Wurmus
2022-10-03gnu: r-annotationforge: Update to 1.38.1....* gnu/packages/bioconductor.scm (r-annotationforge): Update to 1.38.1. Ricardo Wurmus
2022-10-03gnu: r-dearseq: Update to 1.8.4....* gnu/packages/bioconductor.scm (r-dearseq): Update to 1.8.4. Ricardo Wurmus
2022-09-20gnu: r-activedriverwgs: Update to 1.2.0....* gnu/packages/bioconductor.scm (r-activedriverwgs): Update to 1.2.0. Ricardo Wurmus
2022-09-20gnu: r-htscluster: Update to 2.0.10....* gnu/packages/bioconductor.scm (r-htscluster): Update to 2.0.10. Ricardo Wurmus
2022-09-20gnu: r-perfmeas: Update to 1.2.5....* gnu/packages/bioconductor.scm (r-perfmeas): Update to 1.2.5. Ricardo Wurmus
2022-09-20gnu: r-valr: Update to 0.6.5....* gnu/packages/bioconductor.scm (r-valr): Update to 0.6.5. Ricardo Wurmus
2022-09-15gnu: Add r-omicade4....* gnu/packages/bioconductor.scm (r-omicade4): New variable. Ricardo Wurmus
2022-09-15gnu: Add r-made4....* gnu/packages/bioconductor.scm (r-made4): New variable. Ricardo Wurmus
2022-09-10gnu: Add comments to the bottom of a few package modules....This will hopefully discourage patches which add new packages to the bottom of files, as this increases the likelihood of conflicts when applying patches. If there are more specific ways that packages should be arranged in specific modules, this message can be updated accordingly. * gnu/packages/bioconductor.scm: Add comment discouraging adding packages to the bottom of the file. * gnu/packages/bioinformatics.scm: ditto. * gnu/packages/cran.scm: ditto. * gnu/packages/crates-io.scm: ditto. * gnu/packages/emacs-xyz.scm: ditto. * gnu/packages/golang.scm: ditto. * gnu/packages/guile-xyz.scm: ditto. * gnu/packages/haskell-xyz.scm: ditto. * gnu/packages/java.scm: ditto. * gnu/packages/julia-xyz.scm: ditto. * gnu/packages/lisp-xyz.scm: ditto. * gnu/packages/ocaml.scm: ditto. * gnu/packages/perl.scm: ditto. * gnu/packages/python-science.scm: ditto. * gnu/packages/python-xyz.scm: ditto. * gnu/packages/ruby.scm: ditto. * gnu/packages/tex.scm: ditto. Christopher Baines
2022-09-06gnu: r-edger: Update to 3.38.4....* gnu/packages/bioconductor.scm (r-edger): Update to 3.38.4. [propagated-inputs]: Remove r-statmod. Efraim Flashner
2022-09-05gnu: r-genomicalignments: Update to 1.32.1....* gnu/packages/bioconductor.scm (r-genomicalignments): Update to 1.32.1. Efraim Flashner
2022-08-31gnu: Add r-milor....* gnu/packages/bioconductor.scm (r-milor): New variable. Ricardo Wurmus
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