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2017-11-09gnu: roary: Update to 3.11.0....* gnu/packages/bioinformatics.scm (roary): Update to 3.11.0. [inputs]: Add perl-digest-md5-file. Ben Woodcroft
2017-11-08gnu: miso: Use pypi-uri....* gnu/packages/bioinformatics.scm (miso)[source]: Use pypi-uri. Ricardo Wurmus
2017-11-07gnu: Add r-hitc....* gnu/packages/bioinformatics.scm (r-hitc): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-fithic....* gnu/packages/bioinformatics.scm (r-fithic): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-sushi....* gnu/packages/bioinformatics.scm (r-sushi): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-gwascat....* gnu/packages/bioinformatics.scm (r-gwascat): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-gviz....* gnu/packages/bioinformatics.scm (r-gviz): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-gqtlstats....* gnu/packages/bioinformatics.scm (r-gqtlstats): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-ldblock....* gnu/packages/bioinformatics.scm (r-ldblock): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-erma....* gnu/packages/bioinformatics.scm (r-erma): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-homo-sapiens....* gnu/packages/bioinformatics.scm (r-homo-sapiens): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-org-hs-eg-db....* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-snpstats....* gnu/packages/bioinformatics.scm (r-snpstats): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-gqtlbase....* gnu/packages/bioinformatics.scm (r-gqtlbase): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-gprofiler....* gnu/packages/bioinformatics.scm (r-gprofiler): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-ggbio....* gnu/packages/bioinformatics.scm (r-ggbio): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-biovizbase....* gnu/packages/bioinformatics.scm (r-biovizbase): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-organismdbi....* gnu/packages/bioinformatics.scm (r-organismdbi): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-ensembldb....* gnu/packages/bioinformatics.scm (r-ensembldb): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-annotationfilter....* gnu/packages/bioinformatics.scm (r-annotationfilter): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-dirichletmultinomial....* gnu/packages/bioinformatics.scm (r-dirichletmultinomial): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-complexheatmap....* gnu/packages/bioinformatics.scm (r-complexheatmap): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-genomicfiles....* gnu/packages/bioinformatics.scm (r-genomicfiles): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-gage....* gnu/packages/bioinformatics.scm (r-gage): New variable. Ricardo Wurmus
2017-11-07gnu: Add r-keggrest....* gnu/packages/bioinformatics.scm (r-keggrest): New variable. Ricardo Wurmus
2017-11-07gnu: r-msnbase: Update to 2.4.0....* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.4.0. [propagated-inputs]: Add r-lattice; remove r-reshape2. Ricardo Wurmus
2017-11-07gnu: r-mutationalpatterns: Update to 1.4.0....* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 1.4.0. [propagated-inputs]: Add r-cowplot, r-ggdendro, and r-s4vectors. Ricardo Wurmus
2017-11-07gnu: r-annotationhub: Update to 2.10.0....* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.10.0. [propagated-inputs]: Add r-curl. Ricardo Wurmus
2017-11-07gnu: r-mzr: Remove bundled copy of boost....* gnu/packages/bioinformatics.scm (r-mzr)[source]: Remove boost source. [arguments]: Add build phase "use-system-boost" to link with our boost package and avoid building the bundled sources. Ricardo Wurmus
2017-11-07gnu: r-mzr: Update to 2.12.0....* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.12.0. Ricardo Wurmus
2017-11-07gnu: r-mzid: Update to 1.16.0....* gnu/packages/bioinformatics.scm (r-mzid): Update to 1.16.0. Ricardo Wurmus
2017-11-07gnu: r-chipseq: Update to 1.28.0....* gnu/packages/bioinformatics.scm (r-chipseq): Update to 1.28.0. [propagated-inputs]: Add r-lattice. Ricardo Wurmus
2017-11-07gnu: r-genomicfeatures: Update to 1.30.0....* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.30.0. [propagated-inputs]: Add r-rmysql. Ricardo Wurmus
2017-11-07gnu: r-rtracklayer: Update to 1.38.0....* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.38.0. [arguments]: Adjust patch to use system zlib. Ricardo Wurmus
2017-11-07gnu: r-biocparallel: Update to 1.12.0....* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.12.0. [propagated-inputs]: Add r-bh. Ricardo Wurmus
2017-11-07gnu: r-biomart: Update to 2.34.0....* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.34.0. [propagated-inputs]: Add r-progress and r-stringr. Ricardo Wurmus
2017-11-07gnu: r-edger: Update to 3.20.1....* gnu/packages/bioinformatics.scm (r-edger): Update to 3.20.1. [propagated-inputs]: Add r-rcpp. Ricardo Wurmus
2017-11-07gnu: r-gostats: Update to 2.44.0....* gnu/packages/bioinformatics.scm (r-gostats): Update to 2.44.0. [propagated-inputs]: Add r-rgraphviz. Ricardo Wurmus
2017-11-07gnu: r-category: Update to 2.44.0....* gnu/packages/bioinformatics.scm (r-category): Update to 2.44.0. [propagated-inputs]: Remove r-rsqlite; add r-dbi. Ricardo Wurmus
2017-11-07gnu: r-vsn: Update to 3.46.0....* gnu/packages/bioinformatics.scm (r-vsn): Update to 3.46.0. [propagated-inputs]: Remove r-hexbin. Ricardo Wurmus
2017-11-07gnu: r-motifrg: Rename input label....* gnu/packages/bioinformatics.scm (r-motifrg)[propagated-inputs]: Rename label of r-bsgenome-hsapiens-ucsc-hg19. Ricardo Wurmus
2017-11-07gnu: r-motifrg: Update to 1.22.0....* gnu/packages/bioinformatics.scm (r-motifrg): Update to 1.22.0. Ricardo Wurmus
2017-11-07gnu: r-qvalue: Update to 2.10.0....* gnu/packages/bioinformatics.scm (r-qvalue): Update to 2.10.0. Ricardo Wurmus
2017-11-07gnu: r-fastseq: Update to 1.24.0....* gnu/packages/bioinformatics.scm (r-fastseq): Update to 1.24.0. Ricardo Wurmus
2017-11-07gnu: r-interactivedisplaybase: Update to 1.16.0....* gnu/packages/bioinformatics.scm (r-interactivedisplaybase): Update to 1.16.0. Ricardo Wurmus
2017-11-07gnu: r-edaseq: Update to 2.12.0....* gnu/packages/bioinformatics.scm (r-edaseq): Update to 2.12.0. Ricardo Wurmus
2017-11-07gnu: r-msnid: Update to 1.11.0....* gnu/packages/bioinformatics.scm (r-msnid): Update to 1.11.0. Ricardo Wurmus
2017-11-07gnu: r-deseq: Update to 1.30.0....* gnu/packages/bioinformatics.scm (r-deseq): Update to 1.30.0. Ricardo Wurmus
2017-11-07gnu: r-aroma-light: Update to 3.8.0....* gnu/packages/bioinformatics.scm (r-aroma-light): Update to 3.8.0. Ricardo Wurmus
2017-11-07gnu: r-pcamethods: Update to 1.70.0....* gnu/packages/bioinformatics.scm (r-pcamethods): Update to 1.70.0. Ricardo Wurmus
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