| Age | Commit message (Expand) | Author |
|---|
| 2019-12-15 | gnu: r-fastseg: Update to 1.32.0.•••* gnu/packages/bioinformatics.scm (r-fastseg): Update to 1.32.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-keggrest: Update to 1.26.1.•••* gnu/packages/bioinformatics.scm (r-keggrest): Update to 1.26.1.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-gage: Update to 2.36.0.•••* gnu/packages/bioinformatics.scm (r-gage): Update to 2.36.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-genomicfiles: Update to 1.22.0.•••* gnu/packages/bioinformatics.scm (r-genomicfiles): Update to 1.22.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-complexheatmap: Update to 2.2.0.•••* gnu/packages/bioinformatics.scm (r-complexheatmap): Update to 2.2.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-dirichletmultinomial: Update to 1.28.0.•••* gnu/packages/bioinformatics.scm (r-dirichletmultinomial): Update to 1.28.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-ensembldb: Update to 2.10.2.•••* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.10.2.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-organismdbi: Update to 1.28.0.•••* gnu/packages/bioinformatics.scm (r-organismdbi): Update to 1.28.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-biovizbase: Update to 1.34.1.•••* gnu/packages/bioinformatics.scm (r-biovizbase): Update to 1.34.1.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-ggbio: Update to 1.34.0.•••* gnu/packages/bioinformatics.scm (r-ggbio): Update to 1.34.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-gqtlbase: Update to 1.18.0.•••* gnu/packages/bioinformatics.scm (r-gqtlbase): Update to 1.18.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-erma: Update to 1.2.0.•••* gnu/packages/bioinformatics.scm (r-erma): Update to 1.2.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-snpstats: Update to 1.36.0.•••* gnu/packages/bioinformatics.scm (r-snpstats): Update to 1.36.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-ldblock: Update to 1.16.0.•••* gnu/packages/bioinformatics.scm (r-ldblock): Update to 1.16.0.
[propagated-inputs]: Remove r-go-db and r-homo-sapiens.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-gqtlstats: Update to 1.18.0.•••* gnu/packages/bioinformatics.scm (r-gqtlstats): Update to 1.18.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-gviz: Update to 1.30.0.•••* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.30.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-sushi: Update to 1.24.0.•••* gnu/packages/bioinformatics.scm (r-sushi): Update to 1.24.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-gwascat: Update to 2.18.0.•••* gnu/packages/bioinformatics.scm (r-gwascat): Update to 2.18.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-hitc: Update to 1.30.0.•••* gnu/packages/bioinformatics.scm (r-hitc): Update to 1.30.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-fithic: Update to 1.12.0.•••* gnu/packages/bioinformatics.scm (r-fithic): Update to 1.12.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-hdf5array: Update to 1.14.1.•••* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.14.1.
[propagated-inputs]: Add r-matrix.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-rhdf5lib: Update to 1.8.0.•••* gnu/packages/bioinformatics.scm (r-rhdf5lib): Update to 1.8.0.
[arguments]: Update patches.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-beachmat: Update to 2.2.1.•••* gnu/packages/bioinformatics.scm (r-beachmat): Update to 2.2.1.
[propagated-inputs]: Add r-matrix.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-singlecellexperiment: Update to 1.8.0.•••* gnu/packages/bioinformatics.scm (r-singlecellexperiment): Update to 1.8.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-scater: Update to 1.14.5.•••* gnu/packages/bioinformatics.scm (r-scater): Update to 1.14.5.
[propagated-inputs]: Remove r-dplyr.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-scran: Update to 1.14.5.•••* gnu/packages/bioinformatics.scm (r-scran): Update to 1.14.5.
[propagated-inputs]: Remove r-dynamictreecut.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-delayedmatrixstats: Update to 1.8.0.•••* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): Update to 1.8.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-mzid: Update to 1.24.0.•••* gnu/packages/bioinformatics.scm (r-mzid): Update to 1.24.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-vsn: Update to 3.54.0.•••* gnu/packages/bioinformatics.scm (r-vsn): Update to 3.54.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-annotationfilter: Update to 1.10.0.•••* gnu/packages/bioinformatics.scm (r-annotationfilter): Update to 1.10.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-chipseq: Update to 1.36.0.•••* gnu/packages/bioinformatics.scm (r-chipseq): Update to 1.36.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-copywriter: Update to 2.18.0.•••* gnu/packages/bioinformatics.scm (r-copywriter): Update to 2.18.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-affy: Update to 1.64.0.•••* gnu/packages/bioinformatics.scm (r-affy): Update to 1.64.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-affyio: Update to 1.56.0.•••* gnu/packages/bioinformatics.scm (r-affyio): Update to 1.56.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-methylkit: Update to 1.12.0.•••* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.12.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-sva: Update to 3.34.0.•••* gnu/packages/bioinformatics.scm (r-sva): Update to 3.34.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-protgenerics: Update to 1.18.0.•••* gnu/packages/bioinformatics.scm (r-protgenerics): Update to 1.18.0.
| Ricardo Wurmus |
| 2019-12-15 | gnu: r-mzr: Update to 2.20.0.•••* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.20.0.
| Ricardo Wurmus |
| 2019-12-10 | gnu: Add r-qtl2.•••* gnu/packages/bioinformatics.scm (r-qtl2): New variable.
| Efraim Flashner |
| 2019-12-05 | gnu: Really move lisp libraries to lisp-xyz, uglify-js to javascript and stum...•••* gnu/local.mk: Include lisp-xyz.scm.
* gnu/packages/lisp-xyz.scm: New file.
* gnu/packages/lisp.scm: Move all lisp libraries to lisp-xyz.scm, uglify-js to
javascript.scm and stumpwm to wm.scm.
* gnu/packages/javascript.scm: Add uglify-js.
* gnu/packages/wm.scm: Add stumpwm.
* gnu/packages/bioinformatics.scm: Find uglify-js in javascript.scm.
* gnu/packages/machine-learning.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* gnu/packages/web.scm: Find uglify-js in javascript.scm.
* gnu/packages/web-browsers.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* guix/build-system/minify.scm (default-uglify-js): Find uglify-js in
javascript module instead of lisp.
| Pierre Neidhardt |
| 2019-12-05 | Revert "gnu: Properly move lisp libraries to lisp-xyz, uglify-js to javascrip...•••This reverts commit ac1ee30f4f7f9d0ae2a655676b0e8b9eb90a35dd, which
still breaks ‘guix pull’.
| Tobias Geerinckx-Rice |
| 2019-12-05 | gnu: Properly move lisp libraries to lisp-xyz, uglify-js to javascript and st...•••* gnu/local.mk: Include lisp-xyz.scm.
* gnu/packages/lisp-xyz.scm: New file.
* gnu/packages/lisp.scm: Move all lisp libraries to lisp-xyz.scm, uglify-js to
javascript.scm and stumpwm to wm.scm.
* gnu/packages/javascript.scm: Add uglify-js.
* gnu/packages/wm.scm: Add stumpwm.
* gnu/packages/bioinformatics.scm: Find uglify-js in javascript.scm.
* gnu/packages/machine-learning.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* gnu/packages/web.scm: Find uglify-js in javascript.scm.
* gnu/packages/web-browsers.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* guix/build-system/minify.scm (default-uglify-js): Find uglify-js in
javascript module instead of lisp.
| Pierre Neidhardt |
| 2019-12-04 | Merge branch 'staging' | Marius Bakke |
| 2019-12-02 | gnu: python-scipy: Move to (gnu packages python-science).•••* gnu/packages/python-xyz.scm (python-scipy, python2-scipy): Move these from
here...
* gnu/packages/python-science.scm (python-scipy, python2-scipy): ...to here.
* gnu/packages/bioinformatics.scm, gnu/packages/machine-learning.scm,
gnu/packages/statistics.scm: Adjust module imports.
| Ricardo Wurmus |
| 2019-11-28 | Revert "gnu: Move lisp libraries to lisp-xyz, uglify-js to javascript and stu...•••This reverts commit abf43a67d5929bf279edce3e790ef1348dda32a5 as it broke "guix pull".
| Ricardo Wurmus |
| 2019-11-28 | gnu: Move lisp libraries to lisp-xyz, uglify-js to javascript and stumpwm to wm.•••* gnu/local.mk: Include lisp-xyz.scm.
* gnu/packages/lisp-xyz.scm: New file.
* gnu/packages/lisp.scm: Move all lisp libraries to lisp-xyz.scm, uglify-js to
javascript.scm and stumpwm to wm.scm.
* gnu/packages/javascript.scm: Add uglify-js.
* gnu/packages/wm.scm: Add stumpwm.
* gnu/packages/bioinformatics.scm: Find uglify-js in javascript.scm.
* gnu/packages/machine-learning.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* gnu/packages/web.scm: Find uglify-js in javascript.scm.
* gnu/packages/web-browsers.scm: Depend on lisp-xyz.scm instead of lisp.scm.
| Pierre Neidhardt |
| 2019-11-28 | Merge branch 'master' into staging | Marius Bakke |
| 2019-11-25 | gnu: libdivsufsort: Move to datastructures.scm.•••* gnu/packages/bioinformatics.scm (libdivsufsort): Move to ...
* gnu/packages/datastructures.scm: ... here.
| Efraim Flashner |
| 2019-11-25 | gnu: bioperl-minimal: Don't use unstable tarball.•••* gnu/packages/bioinformatics.scm (bioperl-minimal)[source]: Download
using git-fetch.
| Efraim Flashner |
| 2019-11-21 | Merge branch 'master' into staging | Marius Bakke |
