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2024-01-09gnu: Add python-ripser....* gnu/packages/machine-learning.scm (python-ripser): New variable. Change-Id: I21b42e555a5017e68cf43a6eaa19d991db36723d Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Troy Figiel
2024-01-09gnu: Add python-persim....* gnu/packages/machine-learning.scm (python-persim): New variable. Change-Id: I914071a90b4555d7d1218ce83337d49298effb01 Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Troy Figiel
2024-01-09gnu: Add python-hopcroftkarp....* gnu/packages/machine-learning.scm (python-hopcroftkarp): New variable. Change-Id: I444f0371526d7a69d31363c228d5f7818bcf60dd Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Troy Figiel
2024-01-05gnu: onnx: Relax requirement on python-protobuf....* gnu/packages/machine-learning.scm (onnx)[arguments]: Add phase 'relax-requirements. (onnx-for-torch2)[arguments]: Delete 'relax-requirements phase. (onnx-optimizer)[arguments]: Same. Change-Id: If3bde363d06f16f2b82e175076041441d29e8d6e Ricardo Wurmus
2024-01-01gnu: liblantern: Update to 0.11.0-1.4d83bd0....* gnu/packages/machine-learning.scm (liblantern): Update to 0.11.0-1.4d83bd0. Change-Id: I04ac3d64df8ec3b4ba628886640020a24361f4e3 Ricardo Wurmus
2024-01-01gnu: python-pytorch-for-r-torch: Update to 2.0.1....* gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): Update to 2.0.1. * gnu/packages/patches/python-pytorch2-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Change-Id: I97551d543e50f6e511aa0529c097d156cf3f96de Ricardo Wurmus
2024-01-01gnu: Add onnx-optimizer-for-torch2....* gnu/packages/machine-learning.scm (onnx-optimizer-for-torch2): New variable. Change-Id: Icf48cba3f0a30f171b6f01cd033dd135a078ba1a Ricardo Wurmus
2024-01-01gnu: Add onnx-for-torch2....* gnu/packages/machine-learning.scm (onnx-for-torch2): New variable. * gnu/packages/patches/onnx-1.13.1-use-system-googletest.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Change-Id: I8a46b9a8096a33bcf949bc4f5d497e22902ab301 Ricardo Wurmus
2024-01-01gnu: Add xnnpack-for-torch2....* gnu/packages/machine-learning.scm (xnnpack-for-torch2): New variable. * gnu/packages/patches/xnnpack-for-torch2-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Change-Id: I1c35f5fbd064fcc6732b924d7cafaa1a7d03ce04 Ricardo Wurmus
2023-12-22gnu: tensorflow-lite: Update to 2.13.1...* gnu/packages/machine-learning.scm (tensorflow-lite): Update to 2.13.1 Change-Id: Icc7ff237660006e2320df02b353ccab5dac7b7d2 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Andy Tai
2023-12-06gnu: python-autograd: Update to 1.5....* gnu/packages/machine-learning.scm (python-autograd): Update to 1.5. [build-system]: Use pyproject-build-system. [arguments]: Remove custom 'check phase. Change-Id: Ic76510b94d268d5dba6e9b0e057fcfca125e424f Signed-off-by: Ludovic Courtès <ludo@gnu.org> Felix Gruber
2023-12-02gnu: Add python-scikit-learn-extra....* gnu/packages/machine-learning.scm (python-scikit-learn-extra): New variable. Change-Id: I50992ceaa76608f3345df6d74a5d9e4aa7c485a5 gnu/packages/machine-learning.scm | 41 +++++++++++++++++++++++++++++++ 1 file changed, 41 insertions(+) Signed-off-by: Ludovic Courtès <ludo@gnu.org> Timothee Mathieu
2023-11-20gnu: python-imbalanced-learn: Update to 0.11.0....* gnu/packages/machine-learning.scm (python-imbalanced-learn): Update to 0.11.0. [arguments]<#:test-flags>: Move broken tests from "unbreak-tests" phase to here. <#:phases>: Add back some deleted python-keras and tensorflow tests. [native-inputs]: Add python-keras, python-numpydoc and tensorflow. Change-Id: Ibc2827e27ee23e0ffb491cb791bba4d1a3f1109d Signed-off-by: Arun Isaac <arunisaac@systemreboot.net> Troy Figiel
2023-11-20gnu: python-imbalanced-learn: Reformat with guix style....* gnu/packages/machine-learning.scm (python-imbalanced-learn): Reformat with guix style. Change-Id: Ifbdcb8dc43433bd6b4777527d5f8f94d5e1aa168 Arun Isaac
2023-11-03gnu: python-deepxde: Update to 1.10.0....* gnu/packages/machine-learning.scm (python-deepxde): Update to 1.10.0. Change-Id: Ibc37f9e7df45c49f590beb1dda87236e853b88c1 Vinicius Monego
2023-11-03gnu: python-opentsne: Update to 1.0.0....* gnu/packages/machine-learning.scm (python-opentsne): Update to 1.0.0. Vinicius Monego
2023-10-30gnu: Add python-ml-collections....* gnu/packages/machine-learning.scm (python-ml-collections): New variable. Change-Id: I9299fe4221f13d979266fccc7b9cdd96a8d6e678 Ricardo Wurmus
2023-10-25gnu: Add python-funsor....* gnu/packages/machine-learning.scm (python-funsor): New variable. Change-Id: Ibd4b993e4d55a6fdda70fe2b6cf4f665730b6739 Ricardo Wurmus
2023-09-27gnu: python-tslearn: Update to 0.6.2....* gnu/packages/machine-learning.scm (python-tslearn): Update to 0.6.2. Signed-off-by: Christopher Baines <mail@cbaines.net> Sharlatan Hellseher
2023-09-18gnu: tensorflow-lite: Update to 2.13.0....* gnu/packages/machine-learning.scm: (tensorflow-lite): Update to 2.13.0 [inputs]: Add gemmlowp [native-inputs]: Remove gemmlowp-src * gnu/packages/patches/tensorflow-lite-unbundle.patch: New file * gnu/local.mk (dist_patch_DATA): Add it. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Andy Tai
2023-09-16gnu: Add python-gpytorch....* gnu/packages/machine-learning.scm (python-gpytorch): New variable. Vinicius Monego
2023-09-16gnu: Add python-linear-operator....* gnu/packages/machine-learning.scm (python-linear-operator): New variable. Vinicius Monego
2023-09-16gnu: Add python-jaxtyping....* gnu/packages/machine-learning.scm (python-jaxtyping): New variable. Vinicius Monego
2023-09-08gnu: tensorflow-lite: Update to 2.12.1....* gnu/packages/algebra.scm (eigen-for-tensorflow-lite): Remove variable. * gnu/packages/machine-learning.scm (tensorflow-lite): Update to 2.12.1 [arguments]<configure-flags>: Turn on GPU and RUY use; Use cmake to find packages already in Guix as dependencies for absl-cpp, eigen, flatbuffer, neon2ssl, cpuinfo, ruy. [arguments]<phases>: Remove operations setting up absl-cpp, eigen, ruy, and neon2ssl as native inouts as now we use Guix's packages of these as dependencies. Do default build phase. Add steps to install C shared library and benchmark_model tool. [inputs]: Add cpuinfo, eigen, fp16, mesa-header, opencl, pthreadpool, ruy, vulkan and xnnpack as explicit inputs. [native-inputs]: Remove local setup of neon2ssl and ruy as we now use Guix's packages of these as explicit dependencies. * gnu/packages/serialization.scm (flatbuffers-next-shared): New variable, flatbuffers-next built with -fPIC as needed by tensorflow-lite. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Andy Tai
2023-09-07gnu: Add python-fasttext....* gnu/packages/machine-learning.scm (python-fasttext): New variable. Ricardo Wurmus
2023-09-07gnu: Add fasttext....* gnu/packages/machine-learning.scm (fasttext): New variable. Ricardo Wurmus
2023-09-02gnu: python-deepxde: Update to 1.9.3....* gnu/packages/machine-learning.scm (python-deepxde): Update to 1.9.3. Vinicius Monego
2023-08-27gnu: gemmlowp: Update to 0.1-1.08e4bb3....* gnu/packages/machine-learning.scm (gemmlowp): Update to 0.1-1.08e4bb3. Signed-off-by: Christopher Baines <mail@cbaines.net> Andy Tai
2023-08-15gnu: llama-cpp: Update to 0.0.0-0.f31b539....* gnu/packages/machine-learning.scm (llama-cpp): Update to 0.0.0-0.f31b539. [#:phases](install-python-scripts): Adapt python scripts. (install): Remove deleted quantize script installation. Co-authored-by: Andy Tai <atai@atai.org> Signed-off-by: Ludovic Courtès <ludo@gnu.org> Nicolas Graves
2023-08-12gnu: python-pyro-ppl: Update to 1.8.6....* gnu/packages/machine-learning.scm (python-pyro-ppl): Update to 1.8.6. Vinicius Monego
2023-07-29gnu: Add python-deepxde....* gnu/packages/machine-learning.scm (python-deepxde): New variable. Vinicius Monego
2023-07-16gnu: rxcpp: Update to 4.1.1....* gnu/packages/machine-learning.scm (rxcpp): Update to 4.1.1. Tobias Geerinckx-Rice
2023-07-10gnu: Add python-captum....* gnu/packages/machine-learning.scm (python-captum): New variable. Ricardo Wurmus
2023-07-07gnu: Add python-tslearn....* gnu/packages/machine-learning.scm (python-tslearn): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>. Navid Afkhami
2023-06-29gnu: python-threadpoolctl: Update to 3.1.0....* gnu/packages/machine-learning.scm (python-threadpoolctl): Update to 3.1.0. [build-system]: Use pyproject-build-system. [arguments]: Remove custom 'check phase. [native-inputs]: Add python-flit-core. Ricardo Wurmus
2023-06-25gnu: oneapi-dnnl: Fix building on riscv64-linux....'CMake Error at src/cpu/rv64/CMakeLists.txt:36 (message): Only sequential runtime is now supported for a RISC-V CPU'. * gnu/packages/machine-learning.scm (oneapi-dnnl)[arguments]: Adjust configure-flags when building for riscv64-linux to fix build. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Z572
2023-06-20gnu: python-keras: Update to 2.3.1....* gnu/packages/patches/python-keras-integration-test.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/machine-learning.scm (python-keras): Update to 2.3.1. [source]: Remove patch; update snippet. [arguments]: Add build phase 'tf-compatibility; add phase 'hdf5-compatibility; rename phase 'remove-tests-for-unavailable-features to 'delete-unavailable-backends; update 'check phase to disable tests that cannot be repaired or are flaky. [native-inputs]: Add python-flaky, python-markdown, and python-pyux. Ricardo Wurmus
2023-06-20gnu: tensorflow: Patch one more instance of "collections"....* gnu/packages/machine-learning.scm (tensorflow)[arguments]: Add one more patch of "collections" to "collections.abc" to the 'python3.10-compatibility phase. Ricardo Wurmus
2023-06-20gnu: tensorflow: Drop trailing #T from build phase....* gnu/packages/machine-learning.scm (tensorflow)[arguments]: Remove #T from 'set-source-file-times-to-1980 phase. Ricardo Wurmus
2023-06-20gnu: tensorflow: Patch for numpy >= 1.23....* gnu/packages/machine-learning.scm (tensorflow)[arguments]: Remove np.asscalar in 'python3.10-compatibility phase. Ricardo Wurmus
2023-06-20gnu: tensorflow: Drop package labels from propagated-inputs....* gnu/packages/machine-learning.scm (tensorflow)[propagated-inputs]: Drop labels. Ricardo Wurmus
2023-06-14gnu: python-keras: Fix building with newer python....* gnu/packages/machine-learning.scm (python-keras)[source]: Add snippet to adjust for newer versions of python. Efraim Flashner
2023-06-11svn-download: Do not expand keywords....Subversion keyword expansion is potentially non-reproducible as some of them expand time strings relative to the local time zone: https://issues.guix.gnu.org/43442#18 In practice this is not a problem in Guix since Subversion checkouts happen in an isolated environment using the "default timezone" (UTC). However, Software Heritage disables keyword expansion for this very reason. By following suit, we make sure content can be retrieved from there. * guix/build/svn.scm (svn-fecth): Pass "--ignore-keywords" to Subversion. * guix/build-system/texlive.scm (%texlive-date): New variable. * gnu/packages/java.scm (java-geronimo-xbean-reflect) (java-geronimo-genesis-2.1): Update the source hash. * gnu/packages/machine-learning.scm (ghmm): Likewise. * gnu/packages/video.scm (libsmpeg, libsmpeg-with-sdl1): Likewise. * gnu/packages/tex.scm (texlive-bin): Update the hash of the "texlive-scripts" input, and a add a new phase that imitates Subversion keyword expansion for scripts that need it. (texlive-latex-base): Update the hash of the "texlive-luatexconfig" native input. (texlive-hyphen-base, texlive-dvipdfmx, texlive-dvips, texlive-cm) (texlive-tex-plain, texlive-kpathsea, texlive-latexconfig) (texlive-tetex, texlive-pdftex, texlive-xetex): Update the source hash. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Timothy Sample
2023-06-09gnu: Add python-sacrebleu....* gnu/packages/machine-learning.scm (python-sacrebleu): New variable. Ricardo Wurmus
2023-06-08gnu: Add python-spacy....* gnu/packages/machine-learning.scm (python-spacy): New variable. Ricardo Wurmus
2023-06-08gnu: Add python-thinc....* gnu/packages/machine-learning.scm (python-thinc): New variable. Ricardo Wurmus
2023-06-08gnu: Add python-spacy-loggers....* gnu/packages/machine-learning.scm (python-spacy-loggers): New variable. Ricardo Wurmus
2023-06-08gnu: Add python-spacy-legacy....* gnu/packages/machine-learning.scm (python-spacy-legacy): New variable. Ricardo Wurmus
2023-06-02gnu: Add r-rcppml/devel....* gnu/packages/machine-learning.scm (r-rcppml/devel): New variable. Ricardo Wurmus
2023-05-25gnu: Add python-tensorly....* gnu/packages/machine-learning.scm (python-tensorly): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Navid Afkhami