| Age | Commit message (Expand) | Author |
|---|
| 2021-03-02 | gnu: octave: Update to 6.2.0....* gnu/packages/maths.scm (octave): Update to 6.2.0.
[source]: Download tar.xz tarball.
[native-inputs]: Remove lzip.
| Efraim Flashner |
| 2021-02-28 | gnu: slepc: Use HTTPS home page URI....* gnu/packages/maths.scm (slepc)[home-page]: Use HTTPS URI.
| Nicolas Goaziou |
| 2021-02-28 | gnu: elpa: Use HTTPS home page URI....* gnu/packages/maths.scm (elpa)[home-page]: Use HTTPS URI.
| Nicolas Goaziou |
| 2021-02-21 | gnu: Add HDF5 1.12.0....* gnu/packages/maths.scm (hdf5-1.12): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
| Gerd Heber |
| 2021-02-09 | gnu: wxmaxima: Update to 21.01.0....* gnu/packages/maths.scm (wxmaxima): Update to 21.01.0.
[inputs]: Remove libomp.
| Kei Kebreau |
| 2021-02-08 | gnu: hdf5: Update to 1.8.22....Fixes CVE-2018-14033, CVE-2018-11206, CVE-2018-13870, CVE-2018-13869, and
CVE-2018-17435
* gnu/packages/maths.scm (hdf5-1.8): Update to 1.8.22.
* gnu/packages/patches/hdf5-1.8-mpi-deprecations.patch: Delete upstreamed
patch.
* gnu/local/mk (dist_patch_DATA): Remove it.
| Eric Bavier |
| 2021-01-17 | gnu: wxmaxima: Update to 20.12.2....* gnu/packages/maths.scm (wxmaxima): Update to 20.12.2.
[arguments]: Remove #:test-target and disable tests. Remove 'pre-check
phase.
[native-inputs]: Remove xorg-server-for-tests.
[inputs]: Add libomp.
| Kei Kebreau |
| 2021-01-17 | gnu: gnuplot: Update to 5.4.1....* gnu/packages/maths.scm (gnuplot): Update to 5.4.1.
[arguments]: Set GNUTERM in #:make-flags.
| Kei Kebreau |
| 2021-01-04 | gnu: suitesparse: Install libraries into /lib....* gnu/packages/maths.scm (suitesparse)[arguments]: Add to
configure-flags to install programs built with cmake to use 'lib', not
'lib64.'
| Efraim Flashner |
| 2020-12-31 | gnu: matio: Update to 1.5.19....* gnu/packages/maths.scm (matio): Update to 1.5.19.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| Vincent Legoll |
| 2020-12-22 | gnu: octave, octave-cli: Update to 6.1.0....* gnu/packages/maths.scm (octave, octave-cli): Update to 6.1.0.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Greg Hogan |
| 2020-12-17 | gnu: glpk: Don't build static library....* gnu/packages/maths.scm (glpk)[arguments]: Add configure-flag to skip
static library.
| Efraim Flashner |
| 2020-12-17 | gnu: glpk: Update to 5.0....* gnu/packages/maths.scm (glpk): Update to 5.0.
(glpk-4.65): New variable.
* gnu/packages/algebra.scm (giac)[inputs]: Replace glpk with glpk-4.
| Efraim Flashner |
| 2020-12-13 | gnu: veusz: Update to 3.3.1....* gnu/packages/maths.scm (veusz): Update to 3.3.1.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
| Vinicius Monego |
| 2020-12-12 | gnu: sleef: Update to 3.5.1....* gnu/packages/maths.scm (sleef): Update to 3.5.1.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
| Vinicius Monego |
| 2020-12-09 | gnu: dealii: Update to 9.2.0....* gnu/packages/maths.scm (dealii): Update to 9.2.0.
| Eric Bavier |
| 2020-12-08 | gnu: Add tiny-bignum....* gnu/packages/maths.scm (tiny-bignum): New variable.
Signed-off-by: Christopher Baines <mail@cbaines.net>
| Ryan Prior |
| 2020-12-05 | gnu: superlu-dist: Update to 6.4.0....* gnu/packages/maths.scm (superlu-dist): Update to 6.4.0
[source]: Use git-fetch, as tarballs are no longer published.
* gnu/packages/patches/superlu-dist-awpm-grid.patch: Remove all but the first
hunk; they are unnecessary.
| Eric Bavier |
| 2020-12-05 | gnu: scotch: Update to 6.1.0...* gnu/packages/maths.scm (scotch): Update to 6.1.0.
| Eric Bavier |
| 2020-12-01 | gnu: metamath: Update to 0.193....* gnu/packages/maths.scm (metamath): Update to 0.193.
| Tobias Geerinckx-Rice |
| 2020-11-17 | gnu: units: Update to 2.21....* gnu/packages/maths.scm (units): Update to 2.21.
| Tobias Geerinckx-Rice |
| 2020-11-16 | gnu: z3: Update to 4.8.9....* gnu/packages/maths.scm (z3): Update to 4.8.9.
Signed-off-by: Christopher Baines <mail@cbaines.net>
| Martin Becze |
| 2020-11-15 | gnu: superlu: Update to 5.2.2....* gnu/packages/maths.scm (superlu): Update to 5.2.2.
| Tobias Geerinckx-Rice |
| 2020-11-11 | gnu: python-petsc4py: Fix build with python 3.8....* gnu/packages/maths.scm (python-petsc4py)[source]: Add snippet.
[native-inputs]: New field.
| Paul Garlick |
| 2020-10-26 | gnu: netcdf-fortran: Update to 4.5.3....This allows the package to build with netcdf 4.7.4.
* gnu/packages/maths.scm (netcdf-fortran): Update to 4.5.3.
| Christopher Baines |
| 2020-10-26 | gnu: netcdf: Update to 4.7.4....This will fix an issue building qgis.
* gnu/packages/maths.scm (netcdf): Update to 4.7.4.
[source]: Remove the netcdf-tst_h_par.patch, also change the naming of the
source tarball, as the name seems to have changed for recent releases.
[inputs]: Update hdf5 and add curl.
* gnu/packages/patches/netcdf-tst_h_par.patch: Delete.
* gnu/local.mk (dist_patch_DATA): Remove deleted patch.
| Christopher Baines |
| 2020-10-23 | gnu: hdf5: Default to 1.10....This is a followup to 593096355501dfd76c2e92b1fbd87f940ab1d1f2.
* gnu/packages/maths.scm (hdf5): Change to HDF5-1.10.
(hdf-java, hdf-eos5, h5check, netcdf, matio)[inputs]: Use HDF5-1.8.
* gnu/packages/java.scm (java-cisd-jhdf5)[inputs]: Likewise.
| Ludovic Courtès |
| 2020-10-08 | gnu: gmsh: Update to 4.6.0....Gmsh bundles METIS 5 released with Apache License 2.0 since upstream commit
eaff7f6477fe876991615cfa4b5832bd5f12994b. Instead, Gmsh is linked with the
package 'metis'.
* gnu/packages/maths.scm (gmsh): Update to 4.6.0.
(propagated-inputs): Replace 'opencascade-oce' by 'opencascade-occt', add
'metis'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| zimoun |
| 2020-10-01 | gnu: SuiteSparse: Update to 5.8.1....From 0d8692dfebc6ac4b515c06612ab8da4c898719eb Mon Sep 17 00:00:00 2001
From: Greg Hogan <code@greghogan.com>
Date: Tue, 29 Sep 2020 11:54:38 +0000
Subject: [PATCH] gnu: SuiteSparse: Update to 5.8.1.
* gnu/packages/maths.scm (suitesparse): Update to 5.8.1.
[arguments]: Remove unnecessary flag and use default blas and lapack.
[inputs]: Add new dependencies for SLIP_LU component.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Greg Hogan |
| 2020-09-30 | gnu: Fix package references....* gnu/packages/algebra.scm (iml)[inputs]: Correctly refer to package
inputs.
* gnu/packages/astronomy.scm (xplanet),
* gnu/packages/audio.scm (redkite, libaudec, lv2lint, lv2toweb),
* gnu/packages/bioconductor.scm (r-cummerbund),
* gnu/packages/chicken.scm (chicken),
* gnu/packages/conky.scm (conky),
* gnu/packages/cran.scm (r-latex2exp),
* gnu/packages/crates-io.scm (rust-rgb),
* gnu/packages/databases.scm (mariadb),
* gnu/packages/diffoscope.scm (reprotest),
* gnu/packages/file-systems.scm (glusterfs),
* gnu/packages/finance.scm (electron-cash),
* gnu/packages/games.scm (rinutils, ksudoku, kdiamond, kigo),
* gnu/packages/geo.scm (grass),
* gnu/packages/gnome.scm (libmediaart, gnome-contacts, geoclue),
* gnu/packages/gnucash.scm (aqbanking),
* gnu/packages/image.scm (mtpaint),
* gnu/packages/kde-internet.scm (kopete, ktorrent),
* gnu/packages/kde-utils.scm (kmousetool, kmouth, kronometer),
* gnu/packages/linphone.scm (liblinphone),
* gnu/packages/maths.scm (ppl),
* gnu/packages/mercury.scm (mercury-minimal),
* gnu/packages/music.scm (bjumblr, bschaffl, lsp-plugins,
spectacle-analyzer, helm, tap-lv2, wolf-shaper, shiru-lv2),
* gnu/packages/networking.scm (restinio),
* gnu/packages/prolog.scm (swi-prolog),
* gnu/packages/python-web.scm (gunicorn),
* gnu/packages/python-xyz.scm (python-docusign-esign),
* gnu/packages/ruby.scm (ruby-cucumber, ruby_version, ruby-addressable),
* gnu/packages/sagemath.scm (python-cypari2),
* gnu/packages/skarnet.scm (s6-linux-init),
* gnu/packages/vpn.scm (sshuttle),
* gnu/packages/web.scm (libcyaml),
* gnu/packages/xdisorg.scm (kbdd),
* gnu/packages/xorg.scm (xpra): Same.
| Efraim Flashner |
| 2020-09-18 | Revert "gnu: openblas: Update to 0.3.10."...This reverts commit c59e9f0a03241ef3c7b8042054fd54e327f7539a because it
triggers too many rebuilds.
| Mathieu Othacehe |
| 2020-09-18 | gnu: openblas: Update to 0.3.10....* gnu/packages/maths.scm (openblas): Update to 0.3.10.
[source]: Fetch from github.
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
| Greg Hogan |
| 2020-09-17 | gnu: hdf5: Update to 1.10.7....Fixes CVE-2018-13870, CVE-2018-13869 and CVE-2018-17435.
* gnu/packages/maths.scm (hdf5-1.10): Update to 1.10.7.
| Eric Bavier |
| 2020-09-08 | gnu: metamath: Update to 0.192....* gnu/packages/maths.scm (metamath): Update to 0.192.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| B. Wilson |
| 2020-08-27 | gnu: Add libflame....* gnu/packages/maths.scm (libflame): New variable.
| Efraim Flashner |
| 2020-08-27 | gnu: lrslib: Update to 7.1....* gnu/packages/maths.scm (lrslib): Update to 7.1.
| Andreas Enge |
| 2020-08-26 | gnu: octave: Remove unneeded 'source' field....* gnu/packages/maths.scm (octave)[source]: Remove. It had been
unnecessary since b66741edc954f0a17f1ef567e8d612cac87c7b6a.
| Ludovic Courtès |
| 2020-08-26 | gnu: netcdf-parallel-openmpi: Allow MPI tests to pass....* gnu/packages/maths.scm (netcdf-parallel-openmpi)[arguments]: Add
'mip-setup' phase.
| Ludovic Courtès |
| 2020-08-26 | gnu: hdf5-parallel-openmpi: Update to 1.10.6....* gnu/packages/maths.scm (hdf5-parallel-openmpi): Inherit from HDF5-1.10.
| Ludovic Courtès |
| 2020-08-26 | gnu: hdf5: Use 'package/inherit' for variants....* gnu/packages/maths.scm (hdf5-1.10, hdf5-parallel-openmpi): Use
'package/inherit'.
| Ludovic Courtès |
| 2020-08-26 | gnu: hdf5: Distinguish the default hdf5 version....* gnu/packages/maths.scm (hdf5): Rename to...
(hdf-1.8): ... this.
(hdf5-1.10): Adjust accordingly.
(hdf5): New variable.
| Ludovic Courtès |
| 2020-08-16 | gnu: wxmaxima: Update to 20.06.6....* gnu/packages/maths.scm (wxmaxima): Update to 20.06.6.
[arguments]: Add 'patch-doc-path phase.
| Kei Kebreau |
| 2020-08-16 | gnu: Add veusz....* gnu/packages/maths.scm (veusz): New variable.
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
| Vinicius Monego |
| 2020-08-10 | gnu: Add clapack....* gnu/packages/maths.scm (clapack): New variable.
| Ricardo Wurmus |
| 2020-08-04 | gnu: mcrl2: Update to 202006.0....* gnu/packages/maths.scm (mcrl2): Update to 202006.0.
| Jan (janneke) Nieuwenhuizen |
| 2020-07-23 | gnu: Add sleef....* gnu/packages/maths.scm (sleef): New variable.
Signed-off-by: Brett Gilio <brettg@gnu.org>
| Vinicius Monego |
| 2020-07-17 | gnu: java-junit: Install from pom file....* gnu/packages/java.scm (java-junit)[arguments]: Replace install phase.
(java-hamcrest-core)[arguments]: Replace install phase.
(java-hamcrest-library)[arguments]: Replace install phase.
(java-cisd-jhdf5, java-commons-math3, java-commons-collections4)
(java-commons-io, java-commons-exec-1.1, java-commons-exec)
(java-commons-lang3, java-commons-codec, java-native-access)
(java-native-access-platform, java-hamcrest-all): Change junit and hamcrest
jar location accordingly.
(java-hamcrest-all): Use old install phase of java-hamcrest-core.
* gnu/packages/maths.scm (java-hdf): Change junit and hamcrest jar
location accordingly.
| Julien Lepiller |
| 2020-07-12 | gnu: Remove ".git" from "https://github/…/….git"....Until now, 'lookup-origin' and thus 'lookup-origin-revision' in (guix
swh) would sometimes return #f for these because the ".git" URLs are
redirects to the non-".git" URLs. Consequently, 'guix lint -c archival'
would keep saying "scheduled Software Heritage archival"; likewise, the
fallback download code would fail.
* gnu/packages/ada.scm,
gnu/packages/admin.scm,
gnu/packages/aidc.scm,
gnu/packages/algebra.scm,
gnu/packages/android.scm,
gnu/packages/animation.scm,
gnu/packages/arcan.scm,
gnu/packages/assembly.scm,
gnu/packages/audio.scm,
gnu/packages/authentication.scm,
gnu/packages/avr.scm,
gnu/packages/axoloti.scm,
gnu/packages/backup.scm,
gnu/packages/bash.scm,
gnu/packages/benchmark.scm,
gnu/packages/bioconductor.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/bittorrent.scm,
gnu/packages/boost.scm,
gnu/packages/build-tools.scm,
gnu/packages/c.scm,
gnu/packages/calendar.scm,
gnu/packages/cdrom.scm,
gnu/packages/check.scm,
gnu/packages/chemistry.scm,
gnu/packages/chez.scm,
gnu/packages/clojure.scm,
gnu/packages/code.scm,
gnu/packages/compression.scm,
gnu/packages/compton.scm,
gnu/packages/coq.scm,
gnu/packages/cpp.scm,
gnu/packages/cran.scm,
gnu/packages/crypto.scm,
gnu/packages/curl.scm,
gnu/packages/databases.scm,
gnu/packages/datastructures.scm,
gnu/packages/debug.scm,
gnu/packages/disk.scm,
gnu/packages/distributed.scm,
gnu/packages/django.scm,
gnu/packages/dlang.scm,
gnu/packages/dns.scm,
gnu/packages/docker.scm,
gnu/packages/education.scm,
gnu/packages/efi.scm,
gnu/packages/elixir.scm,
gnu/packages/emacs-xyz.scm,
gnu/packages/embedded.scm,
gnu/packages/emulators.scm,
gnu/packages/engineering.scm,
gnu/packages/erlang.scm,
gnu/packages/fabric-management.scm,
gnu/packages/file-systems.scm,
gnu/packages/finance.scm,
gnu/packages/firmware.scm,
gnu/packages/flashing-tools.scm,
gnu/packages/fonts.scm,
gnu/packages/fontutils.scm,
gnu/packages/fpga.scm,
gnu/packages/game-development.scm,
gnu/packages/games.scm,
gnu/packages/genealogy.scm,
gnu/packages/genimage.scm,
gnu/packages/geo.scm,
gnu/packages/gimp.scm,
gnu/packages/gl.scm,
gnu/packages/gnome-xyz.scm,
gnu/packages/gnome.scm,
gnu/packages/gnuzilla.scm,
gnu/packages/golang.scm,
gnu/packages/gpodder.scm,
gnu/packages/graph.scm,
gnu/packages/graphics.scm,
gnu/packages/graphviz.scm,
gnu/packages/groff.scm,
gnu/packages/groovy.scm,
gnu/packages/gtk.scm,
gnu/packages/guile-xyz.scm,
gnu/packages/guile.scm,
gnu/packages/hardware.scm,
gnu/packages/haskell-apps.scm,
gnu/packages/haskell-xyz.scm,
gnu/packages/hexedit.scm,
gnu/packages/i2p.scm,
gnu/packages/ibus.scm,
gnu/packages/image-processing.scm,
gnu/packages/image-viewers.scm,
gnu/packages/image.scm,
gnu/packages/ipfs.scm,
gnu/packages/java-graphics.scm,
gnu/packages/java-maths.scm,
gnu/packages/java.scm,
gnu/packages/javascript.scm,
gnu/packages/jrnl.scm,
gnu/packages/julia.scm,
gnu/packages/jupyter.scm,
gnu/packages/kodi.scm,
gnu/packages/language.scm,
gnu/packages/lego.scm,
gnu/packages/less.scm,
gnu/packages/libusb.scm,
gnu/packages/linux.scm,
gnu/packages/lirc.scm,
gnu/packages/lisp-xyz.scm,
gnu/packages/llvm.scm,
gnu/packages/logging.scm,
gnu/packages/lolcode.scm,
gnu/packages/lua.scm,
gnu/packages/lxde.scm,
gnu/packages/lxqt.scm,
gnu/packages/machine-learning.scm,
gnu/packages/mail.scm,
gnu/packages/markup.scm,
gnu/packages/maths.scm,
gnu/packages/maven.scm,
gnu/packages/mes.scm,
gnu/packages/messaging.scm,
gnu/packages/monitoring.scm,
gnu/packages/mpd.scm,
gnu/packages/music.scm,
gnu/packages/networking.scm,
gnu/packages/node-xyz.scm,
gnu/packages/ocaml.scm,
gnu/packages/ocr.scm,
gnu/packages/onc-rpc.scm,
gnu/packages/opencl.scm,
gnu/packages/opencog.scm,
gnu/packages/pantheon.scm,
gnu/packages/password-utils.scm,
gnu/packages/patchutils.scm,
gnu/packages/pdf.scm,
gnu/packages/perl6.scm,
gnu/packages/phabricator.scm,
gnu/packages/popt.scm,
gnu/packages/printers.scm,
gnu/packages/prolog.scm,
gnu/packages/protobuf.scm,
gnu/packages/pulseaudio.scm,
gnu/packages/python-crypto.scm,
gnu/packages/python-web.scm,
gnu/packages/python-xyz.scm,
gnu/packages/qt.scm,
gnu/packages/radio.scm,
gnu/packages/rails.scm,
gnu/packages/rdf.scm,
gnu/packages/rednotebook.scm,
gnu/packages/rpc.scm,
gnu/packages/rsync.scm,
gnu/packages/ruby.scm,
gnu/packages/rust.scm,
gnu/packages/scheme.scm,
gnu/packages/screen.scm,
gnu/packages/security-token.scm,
gnu/packages/selinux.scm,
gnu/packages/serialization.scm,
gnu/packages/shells.scm,
gnu/packages/shellutils.scm,
gnu/packages/simh.scm,
gnu/packages/sml.scm,
gnu/packages/ssh.scm,
gnu/packages/statistics.scm,
gnu/packages/stenography.scm,
gnu/packages/sync.scm,
gnu/packages/syncthing.scm,
gnu/packages/synergy.scm,
gnu/packages/telephony.scm,
gnu/packages/terminals.scm,
gnu/packages/tex.scm,
gnu/packages/texinfo.scm,
gnu/packages/text-editors.scm,
gnu/packages/textutils.scm,
gnu/packages/time.scm,
gnu/packages/tmux.scm,
gnu/packages/tor.scm,
gnu/packages/toys.scm,
gnu/packages/version-control.scm,
gnu/packages/video.scm,
gnu/packages/vim.scm,
gnu/packages/virtualization.scm,
gnu/packages/vlang.scm,
gnu/packages/vnc.scm,
gnu/packages/vpn.scm,
gnu/packages/web-browsers.scm,
gnu/packages/web.scm,
gnu/packages/wireservice.scm,
gnu/packages/wm.scm,
gnu/packages/wxwidgets.scm,
gnu/packages/xdisorg.scm,
gnu/packages/xml.scm,
gnu/packages/xorg.scm,
tests/lint.scm: Remove trailing ".git" from 'git-reference' URL.
| Ludovic Courtès |
| 2020-07-11 | gnu: ruby-asciimath: Update to 2.0.1....* gnu/packages/maths.scm (ruby-asciimath): Update to 2.0.1.
[arguments]: Remove.
[native-inputs]: Remove bundler, add ruby-nokogiri.
| Maxim Cournoyer |
| 2020-07-09 | gnu: qalculate-gtk: Fix typo in description....* gnu/packages/maths.scm (qalculate-gtk)[description]: Fix typo.
| Tobias Geerinckx-Rice |
