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2024-03-04gnu: units: Update to 2.23....* gnu/packages/maths.scm (units): Update to 2.23. Change-Id: Ia1b3df68c125631255cb3d28d2bf55d3148ee462 Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Andy Tai
2024-02-27gnu: giza: Update to 1.4.1....* gnu/packages/maths.scm (giza): Update to 1.4.1. Change-Id: I7e6087e22cc6dea4a680fa45db155e42a724b50d Sharlatan Hellseher
2024-02-27gnu: petsc: Reduce closure size....Reduces closure size from 828 MiB to 463 MiB (44%) by removing references to build dependencies such as GCC. * gnu/packages/maths.scm (petsc)[arguments]: Add ‘clear-reference-to-compiler’ phase. In ‘clean-install’ phase, also remove “configure-hash”. Change-Id: I2e6900747b2118546f0a39ceb109b3f2f90e6949 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Lars Bilke
2024-02-14gnu: arpack-ng: Update to 3.9.1....* gnu/packages/maths.scm (arpack-ng): Update to 3.9.1. Drop patch. * gnu/packages/patches/arpack-ng-propagate-rng-state.patch: Remove file. * gnu/packages/maths.scm (dist_patch_DATA): Unregister patch. Change-Id: I33a666c3a88fb2f6791c8d698eeb054a831103fc Andreas Enge
2024-02-14gnu: arpack-ng: Add preprocessor flag....* gnu/packages/maths.scm (arpack-ng): Add configure flag for building ISO C binding headers. Change-Id: Iddfd67094ffafc3cabd88353e3839e5e903b804a Signed-off-by: Andreas Enge <andreas@enge.fr> Romain GARBAGE
2024-02-08gnu: frama-c: Update to 27.1....* gnu/packages/maths.scm (frama-c): Update to 27.1. (why3): Update to 1.6.0. Change-Id: I74191e4274d58a88a772413875fbf7de4d243fec Julien Lepiller
2024-01-16gnu: python-kiwisolver: Update to 1.4.5....* gnu/packages/maths.scm (python-kiwisolver): Update to 1.4.5. [build-system]: Use pyproject-build-system. [propagated-inputs]: Add python-typing-extension. [native-inputs]: Add python-cppy, python-pytest, and python-setuptools-scm. Change-Id: Iea75440dc58fa342dcf4a2a381b6dcc17e71e618 Ricardo Wurmus
2023-12-25gnu: scotch: Update to 7.0.4...* gnu/packages/maths.scm (scotch): Update to version 7.0.4. Change-Id: I493113ecc1694e8812fb38d8e4641398eb174b34 Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Romain GARBAGE
2023-12-05gnu: wxmaxima: Update to 23.11.0...* gnu/packages/maths.scm (wxmaxima): Update to 23.11.0 Change-Id: Ifd1d705ec21f8f437eeb6364dea7d51638567eb7 Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Andy Tai
2023-12-04gnu: Add python-quadpy....* gnu/packages/maths.scm (python-quadpy): New variable. Change-Id: Icb5a60920465bc5861cf32ffe5dc44a9088af890 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Felix Gruber
2023-12-04gnu: Add python-orthopy....* gnu/packages/maths.scm (python-orthopy): New variable. Change-Id: I75e528f30d285666b8012a9cbc5cbb7e28aaf764 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Felix Gruber
2023-12-04gnu: Add python-ndim....* gnu/packages/maths.scm (python-ndim): New variable. Change-Id: I543f1f5e195f4f2fd5bd70f9ce29ec750a24439b Signed-off-by: Ludovic Courtès <ludo@gnu.org> Felix Gruber
2023-12-04gnu: Add python-accupy....* gnu/packages/maths.scm (python-accupy): New variable. * gnu/packages/patches/python-accupy-fix-use-of-perfplot.patch: New file. * gnu/packages/patches/python-accupy-use-matplotx.patch: New file. * gnu/local.mk (dist_patch_DATA): Add new patch files. Change-Id: I0222665d54a36830844b3b33e3dcb546741cfaa1 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Felix Gruber
2023-12-04gnu: octave: Update to 8.4.0...* gnu/packages/maths.scm (octave-cli): Update to 8.4.0 Change-Id: I88fe31a25a3fbfc28985f5f0b51cb042369f4462 Signed-off-by: Eric Bavier <bavier@posteo.net> Andy Tai
2023-11-23gnu: scilab: Set default SCIHOME value....* gnu/packages/maths.scm (scilab): Set default SCIHOME value. [argmuments](phases)[rewrap-scilab-cli]: Set default -scihome option to respect XDG base dirs specification. Change-Id: I9b55758a3ca1fbc523c3e40e891a2462f3246390 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Nicolas Graves
2023-11-23gnu: scilab: Add phase set-version....* gnu/packages/maths.scm (scilab): Add phase set-version. [arguments](phases): Add phase set-version. Change-Id: I0e461a229931d159196cae73d1db584250c579b2 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Nicolas Graves
2023-11-23gnu: scilab: Update to 2024.0.0....* gnu/packages/maths.scm (scilab): Update to 2024.0.0. Remove patch. [native-inputs]: Switch to AUTOCONF-2.71. [inputs]: Switch to HDF5-1.10; add LIBARCHIVE. [arguments]: Add ‘fix-linking’ phase. Change-Id: Ie1af4dc620cee644388f6b8acf88ea50c4148b65 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Nicolas Graves
2023-11-23gnu: scilab: Reindent....* gnu/packages/maths.scm (scilab): Reindent. Change-Id: I4813863a8ef5cb36de597ed31bcce0b34cfb1160 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Nicolas Graves
2023-11-23gnu: scilab: Add phase rewrap-scilab-cli....* gnu/packages/maths.scm (scilab): Add phase rewrap-scilab-cli. Change-Id: Ia3ca5df1a4795c34b6c1cdc8c3b0d7cc2badf0cb Signed-off-by: Ludovic Courtès <ludo@gnu.org> Nicolas Graves
2023-11-23gnu: scilab: Use gexp for tcl and tk libraries....* gnu/packages/maths.scm (scilab): Use gexp for tcl and tk libraries. [argments](configure-flags): Use gexp for tcl and tk libraries. Change-Id: I31fe9a9e2afd9b6266a2e7a2c7044b3c9d0dfa4f Signed-off-by: Ludovic Courtès <ludo@gnu.org> Nicolas Graves
2023-11-23gnu: scilab: Activate tests and disable failing tests....* gnu/packages/maths.scm (scilab): Activate tests and disable failing tests. [arguments]: (tests?): Activate tests. (phases): [remove-desktop-files]: Extend and rename to restrain-to-scilab-cli. [disable-failing-tests]: Add phase. Change-Id: Icfec349c6efe14e7787ba8d385e5d51f82be82ea Signed-off-by: Ludovic Courtès <ludo@gnu.org> Nicolas Graves
2023-11-23gnu: scilab: Remove uneeded code....* gnu/packages/maths.scm (scilab): [source](snippet): Remove directory Visual-Studio-settings and file Scilab.sln. [arguments](configure-flags): Remove uneeded FFLAGS environment variable set. [arguments](phases): prebuild: Remove uneeded SCIHOME setting code. Change-Id: I71c044e19617bf556bbe95e7ba0cdbd716921055 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Nicolas Graves
2023-11-18gnu: elemental: Update package style....* gnu/packages/maths.scm (elemental): Update package style, shift order of package fields. [arguments]: Use G-expressions. {phases}: Remove trailing #f from each lambda. Change-Id: Ib961eb99159e1206963041bd7014dca032a21441 Signed-off-by: Eric Bavier <bavier@posteo.net> Sharlatan Hellseher
2023-11-18gnu: elemental: Remove input labels....* gnu/packages/maths.scm (elemental)[inputs]: Remove labels. Change-Id: I239b56cb5871d5cb2dbd587502c647a37beb30b7 Signed-off-by: Eric Bavier <bavier@posteo.net> Sharlatan Hellseher
2023-11-18gnu: elemental: Update to 0.87.7-0.6eb15a0....The build of elemental is failed on GCC 7+: https://github.com/elemental/Elemental/issues/254 Fixed but not released yet in merge request: https://github.com/elemental/Elemental/pull/259 * gnu/packages/maths.scm (elemental): Update to 0.87.7-0.6eb15a0. Change-Id: I333f1de160489035f1a8875173abdd57c03ef777 Signed-off-by: Eric Bavier <bavier@posteo.net> Sharlatan Hellseher
2023-10-27gnu: Add popf....* gnu/packages/maths.scm (popf): New variable. Liliana Marie Prikler
2023-10-25gnu: gnuplot: Update to 5.4.9....* gnu/packages/maths.scm (gnuplot): Update to 5.4.9. [arguments]<#:configure-flags>: Add --with-qt=no. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Paul A. Patience
2023-10-24gnu: nauty: Update to 2.8.6....* gnu/packages/maths.scm (nauty): Update to 2.8.6. [arguments]<#:phases>: Remove unnecessary phases. Add a phase to fix location of installed ".pc" files. Change-Id: I65db0b2dde6e7a9dda396598d744e21ce7c78200 Nicolas Goaziou
2023-10-21gnu: trilinos-for-dealii-openmpi: Fix build....This fixes the error error: ‘std::hypot’ has not been declared caused by using an older version of gcc, but requires some patches to placate newer versions of gcc. * gnu/packages/maths.scm (trilinos-for-dealii-openmpi)[origin]: Add patches. [native-inputs]: Remove gcc-7. * gnu/packages/patches/teuchos-remove-duplicate-using.patch: New file. * gnu/packages/patches/tpetra-remove-duplicate-using.patch: Likewise. * gnu/local.mk (dist_patch_DATA): Register them. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Paul A. Patience
2023-10-21gnu: Propagate suitesparse-* inputs referenced in header files....* gnu/packages/maths.scm (suitesparse-amd, suitesparse-btf, suitesparse-camd, suitesparse-colamd, suitesparse-ccolamd, gklib-suitesparse, suitesparse-cholmod, suitesparse-cxsparse, suitesparse-klu, suitesparse-ldl, suitesparse-rbio, suitesparse-mongoose, suitesparse-spex, suitesparse-spqr, suitesparse-umfpack)[inputs]: Move relevant suitesparse-* packages ... [propagated-inputs]: ... to here. Signed-off-by: Ludovic Courtès <ludo@gnu.org> David Elsing
2023-10-17gnu: nomad-optimizer: Update to 4.3.1....* gnu/packages/maths.scm (nomad-optimizer): Update to 4.3.1. [native-inputs]: Remove python-wrapper and python-cython. Add openmpi. [arguments]: Use G-expressions. Remove #:imported-modules and #:modules. <#:configure-flags>: Remove -DBUILD_INTERFACE_PYTHON=ON. <#:phases>: Remove 'fix-sources-for-build' phase. Rename 'fix-sources-for-tests' phase to 'fix-tests' and update it. Add 'mpi-setup' phase. Signed-off-by: Christopher Baines <mail@cbaines.net> Paul A. Patience
2023-10-15gnu: Add fast-downward....* gnu/packages/maths.scm (fast-downward): New variable. Liliana Marie Prikler
2023-10-14gnu: dealii: Update to 9.5.1....* gnu/packages/maths.scm (dealii): Update to 9.5.1. [propagated-inputs]: Add kokkos. [arguments]<#:phases>: Add 'unset-cpath' phase. (dealii-openmpi)[propagated-inputs]: Remove kokkos. [arguments]<#:phases>: Delete 'unset-cpath' phase. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Paul A. Patience
2023-10-11gnu: Add bliss....* gnu/packages/maths.scm (bliss): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> David Elsing
2023-10-06gnu: Add linasm....* gnu/packages/maths.scm (linasm): New variable. Ricardo Wurmus
2023-10-06gnu: Add suitesparse-umfpack....* gnu/packages/maths.scm (suitesparse-umfpack): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> David Elsing
2023-10-06gnu: Add suitesparse-spqr....* gnu/packages/maths.scm (suitesparse-spqr): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> David Elsing
2023-10-06gnu: Add suitesparse-spex....* gnu/packages/maths.scm (suitesparse-spex): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> David Elsing
2023-10-06gnu: Add suitesparse-mongoose....* gnu/packages/maths.scm (suitesparse-mongoose): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> David Elsing
2023-10-06gnu: Add suitesparse-rbio....* gnu/packages/maths.scm (suitesparse-rbio): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> David Elsing
2023-10-06gnu: Add suitesparse-ldl....* gnu/packages/maths.scm (suitesparse-ldl): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> David Elsing
2023-10-06gnu: Add suitesparse-klu....* gnu/packages/maths.scm (suitesparse-klu): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> David Elsing
2023-10-06gnu: Add suitesparse-cxsparse....* gnu/packages/maths.scm (suitesparse-cxsparse): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> David Elsing
2023-10-06gnu: Add suitesparse-cholmod....* gnu/packages/maths.scm (suitesparse-cholmod): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> David Elsing
2023-10-06gnu: Add metis-suitesparse....* gnu/packages/maths.scm (metis-suitesparse): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> David Elsing
2023-10-06gnu: Add gklib-suitesparse....* gnu/packages/maths.scm (gklib-suitesparse): New variable. * gnu/packages/patches/gklib-suitesparse.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org> David Elsing
2023-10-06gnu: Add metis-5.2....* gnu/packages/maths.scm (metis-5.2): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> David Elsing
2023-10-06gnu: Add gklib....* gnu/packages/maths.scm (gklib): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> David Elsing
2023-10-06gnu: Add suitesparse-ccolamd....* gnu/packages/maths.scm (suitesparse-ccolamd): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> David Elsing
2023-10-06gnu: Add suitesparse-colamd....* gnu/packages/maths.scm (suitesparse-colamd): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> David Elsing