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2018-04-10gnu: qemu: Fix build with glibc-2.27....* gnu/packages/patches/qemu-glibc-2.27.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/virtualization.scm (qemu)[source]: Add patch. [native-inputs]: Add flex and bison. * gnu/packages/bootloaders.scm (qemu-minimal-2.10)[source]: Add patch. Mark H Weaver
2018-04-10gnu: btrfs-progs: Update to 4.15.1, fix build, use invoke....* gnu/packages/patches/btrfs-progs-e-value-block.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/linux.scm (btrfs-progs): Update to 4.15.1. [arguments]: Use invoke. [native-inputs]: Add grep. Mark H Weaver
2018-04-10gnu: boost: Fix ICU support....* gnu/packages/patches/boost-fix-icu-build.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/boost.scm (boost)[source]: Add the patch. [arguments]: In the custom configure phase, pass --with-icu=[...] to ./bootstrap.sh Mark H Weaver
2018-04-10Merge branch 'master' into core-updatesMark H Weaver
2018-04-06gnu: llvm, clang: Update to 6.0.0....* gnu/packages/llvm.scm (llvm, clang-runtime, clang): Update to 6.0.0. (clang-from-llvm)(patches): Set to empty list. [arguments]: Adjust substitutions depending on major version. (llvm-3.8, clang-runtime-3.8, clang-3.8): New public variables. (clang-3.7, clang-3.6, clang-3.5)(patches): Add 'clang-3.5-libc-search-path.patch'. (clang-3.9.1)(patches): Add 'clang-3.8-libc-search-path.patch'. * gnu/packages/patches/clang-6.0-libc-search-path.patch: New file. * gnu/packages/patches/clang-libc-search-path.patch: Rename to ... * gnu/packages/patches/clang-3.5-libc-search-path.patch: ... this. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Marius Bakke
2018-04-05gnu: make-bootstrap: Adjust gawk patch to 4.2.1....* gnu/packages/patches/gawk-shell.patch: Update for 4.2.1. Marius Bakke
2018-04-04gnu: 4store: Remove preprocessor directive....* gnu/packages/databases.scm (4store): Add patch to remove preprocessor directive. * gnu/packages/patches/4store-unset-preprocessor-directive.patch: New file. * gnu/local.mk: Register patch. Roel Janssen
2018-04-02gnu: racket: Patch xform compilation errors....* gnu/packages/patches/gnu/packages/patches/racket-fix-xform-issue.patch: Renamed from gnu/packages/patches/racket-minus_zero_p-disable-xform.patch. Switch to upstream patch in Racket. * gnu/packages/scheme.scm (racket): Update to renamed patch. Christopher Lemmer Webber
2018-04-02gnu: racket: Update to 6.12....* gnu/packages/patches/racket-minus_zero_p-disable-xform.patch: New file. * gnu/packages/scheme.scm (racket): Update version and patch. Christopher Lemmer Webber
2018-04-02gnu: libgpg-error: Fix building on aarch64-linux....* gnu/packages/patches/gnupg.scm (libgpg-error)[source]: Add patch. * gnu/packages/patches/libgpg-error-aarch64-logging-fix.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner
2018-04-02gnu: glibc: Fix <https://sourceware.org/bugzilla/show_bug.cgi?id=22644>....* gnu/packages/patches/glibc-2.27-git-fixes.patch: Add commit 55ad82e45c. Marius Bakke
2018-04-02gnu: ghostscript: Update to 9.23....* gnu/packages/ghostscript.scm (ghostscript): Update to 9.23. [source](snippet): Adjust to removed LCMS2 library. [arguments]: Remove FIX-DOC-DIR-PHASE. Prevent docdir compatibility symlink. [inputs]: Remove LCMS2. * gnu/packages/patches/ghostscript-no-header-id.patch: Adjust context. Marius Bakke
2018-04-01gnu: glibc: Reinstate fallback code for systems lacking 'prlimit64'....* gnu/packages/patches/glibc-reinstate-prlimit64-fallback.patch: New file. * gnu/packages/base.scm (glibc/linux)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it. Ludovic Courtès
2018-03-31gnu: libgnomeui: Avoid store file names in patch....This placates 'assert-no-store-file-names', which would prevent 'make dist' from succeeding. * gnu/packages/patches/libgnomeui-utf8.patch: Replace store file names with ellipses. Ludovic Courtès
2018-03-31gnu: python-pycairo: Update to 1.16.3....* gnu/packages/gtk.scm (python-pycairo): Update to 1.16.3. [source]: Remove patch. [build-system]: Switch to python-build-system. [native-inputs]: Remove python-waf. [home-page]: Use HTTPS URI. * gnu/packages/patches/pycairo-wscript.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Unregister it. Arun Isaac
2018-03-30gnu: Add delly....* gnu/packages/bioinformatics.scm (delly): New variable. * gnu/packages/patches/delly-use-system-libraries.patch: New file. * gnu/local.mk: Include delly-use-system-libraries.patch. Signed-off-by: Leo Famulari <leo@famulari.name> Roel Janssen
2018-03-29Merge branch 'master' into core-updatesMarius Bakke
2018-03-29gnu: libusb-for-axoloti: Update patch....* gnu/packages/patches/libusb-for-axoloti.patch: Update context for libusb 1.0.22. Ricardo Wurmus
2018-03-29gnu: util-linux: Update to 2.32....* gnu/packages/patches/util-linux-tests.patch: Adjust context. * gnu/packages/patches/util-linux-CVE-2018-7738.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/linux.scm (util-linux): Update to 2.32. [source](patches): Remove 'util-linux-CVE-2018-7738.patch'. Marius Bakke
2018-03-28gnu: elogind: Fix build with glibc-2.27....* gnu/packages/patches/elogind-glibc-2.27.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/freedesktop.scm (elogind)[source]: Add patch. [arguments]: Replace the bootstrap phase with what was previously the autogen phase. Mark H Weaver
2018-03-27gnu: mupdf: Fix CVE-2018-{6544,1000051}....* gnu/packages/patches/mupdf-CVE-2018-1000051.patch, gnu/packages/patches/mupdf-CVE-2018-6544.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/pdf.scm (mupdf)[source]: Use them. Leo Famulari
2018-03-26gnu: translate-shell: Update to 0.9.6.7....* gnu/packages/patches/translate-shell-fix-curl-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/dictionaries.scm (translate-shell): Update to 0.9.6.7. [source](patches): Add it. [home-page]: Append slash. Oleg Pykhalov
2018-03-26gnu: hwloc@2: Update to 2.0.1....* gnu/packages/mpi.scm (hwloc-2.0): Update to 2.0.1. [source]: Remove 'patches'. * gnu/packages/patches/hwloc-tests-without-sysfs.patch: Remove. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Ludovic Courtès
2018-03-26gnu: classpath: Add aarch64-linux support....* gnu/packages/java.scm (classpath-bootstrap, classpath-0.99)[source]: Add patch. * gnu/packages/patches/classpath-aarch64-support.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner
2018-03-25gnu: make-bootstrap: Adapt glibc-bootstrap-system.patch for glibc-2.27....* gnu/packages/patches/glibc-bootstrap-system.patch: Adapt for glibc-2.27. Mark H Weaver
2018-03-25gnu: pulseaudio: Fix build with glibc-2.27....* gnu/packages/patches/pulseaudio-glibc-2.27.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/pulseaudio.scm (pulseaudio)[source]: Add the patch. [arguments]: Replace 'bootstrap' phase. [native-inputs]: Add autoconf, automake, and libtool. Mark H Weaver
2018-03-25gnu: links: Update to 2.15....* gnu/packages/web-browsers.scm (links): Update to 2.15. [source]: Remove patch for fixed CVE. * gnu/packages/patches/links-CVE-2017-11114.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Tobias Geerinckx-Rice
2018-03-23gnu: cmake: Update to 3.10.2....* gnu/packages/cmake.scm (cmake): Update to 3.10.2. [source]: Remove cmake-fix-tests patch. Do not remove bundled cmlibuv. [arguments]: Replace system* with invoke. [inputs]: Add rhash. Sort. [home-page]: Update URL. * gnu/packages/patches/cmake-fix-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Unregister it. Arun Isaac
2018-03-22gnu: Add lyx....* gnu/packages/patches/lyx-2.2.3-fix-test.patch: New file. * gnu/local.mk: Add it. * gnu/packages/tex.scm (lyx): New variable. Danny Milosavljevic
2018-03-22gnu: make: Fix compatibility with glibc 2.27....* gnu/packages/patches/make-glibc-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/base.scm (gnu-make)[source](patches): Use it. Marius Bakke
2018-03-22gnu: glibc: Update to 2.27....* gnu/packages/base.scm (glibc/linux): Update to 2.27. [source](patches): Add 'glibc-hidden-visibility-ldconfig.patch' and 'glibc-2.27-git-fixes.patch'. [native-inputs]: Add BISON. [arguments]: Remove deprecated "--enable-add-ons" from #:configure-flags. Also remove unneeded "libc_cv_ssp=no" and "libcv_ssp_strong=no". (glibc-2.26): New public variable. * gnu/packages/commencement.scm (glibc-final-with-bootstrap-bash)[native-inputs]: Add BISON-BOOT0. * gnu/packages/patches/glibc-2.27-git-fixes.patch, gnu/packages/patches/glibc-hidden-visibility-ldconfig.patch: New files. * gnu/local.mk (dist_patch_DATA): Register them. Marius Bakke
2018-03-22gnu: shepherd: Update to 0.4.0....* gnu/packages/admin.scm (shepherd): Update to 0.4.0. Remove patches. * gnu/packages/patches/shepherd-close-fds.patch, gnu/packages/patches/shepherd-herd-status-sorted.patch: Remove. * gnu/local.mk (dist_patch_DATA): Remove them. * gnu/services/admin.scm (%default-rotations): Remove /var/log/shepherd.log. Ludovic Courtès
2018-03-20gnu: gcc: Adjust 'strmov' patch for string constants in variables....Fixes <https://bugs.gnu.org/30395>. * gnu/packages/patches/gcc-strmov-store-file-names.patch: Update patch to deal with string constants stored in 'static' variables. Ludovic Courtès
2018-03-20Merge branch 'master' into core-updatesMark H Weaver
2018-03-20Merge branch 'staging'Marius Bakke
2018-03-20gnu: fontconfig: Update to 2.13.0....* gnu/packages/patches/fontconfig-remove-debug-printf.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/fontutils.scm (fontconfig): Update to 2.13.0. [source](patches): Remove. [propagated-inputs]: Add UTIL-LINUX. Marius Bakke
2018-03-20Merge branch 'master' into core-updatesMark H Weaver
2018-03-19gnu: bash-completion: Update to 2.8....* gnu/packages/bash.scm (bash-completion): Update to 2.8. * gnu/packages/patches/bash-completion-directories.patch: Update context. Tobias Geerinckx-Rice
2018-03-19gnu: libtirpc: Update to 1.0.3....* gnu/packages/onc-rpc.scm (libtirpc): Update to 1.0.3. [source]: Remove patch. * gnu/packages/patches/libtirpc-missing-headers.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Tobias Geerinckx-Rice
2018-03-18gnu: guile-gdbm-ffi: Add support for gdbm-1.14....* gnu/packages/patches/guile-gdbm-ffi-support-gdbm-1.14.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/guile.scm (guile-gdbm-ffi)[inputs]: Move above arguments. Add the patch, and the 'patch' program. [propagated-inputs]: Move above arguments. [arguments]: In the builder, add code to apply the patch. Mark H Weaver
2018-03-18Merge branch 'master' into stagingMarius Bakke
2018-03-18gnu: java-simple-xml: Fix java8 test failures....* gnu/packages/patches/javas-simple-xml-fix-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/java.scm (java-simple-xml)[source](patches): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Gábor Boskovits
2018-03-17gnu: libvorbis: Ungraft....* gnu/packages/xiph.scm (libvorbis): Update to 1.3.6. [replacement]: Remove field. [source]: Remove patches. (libvorbis-1.3.6): Remove variable. Mark H Weaver
2018-03-17Merge branch 'master' into core-updatesMark H Weaver
2018-03-16gnu: binutils: Update to 2.30....* gnu/packages/patches/binutils-ld-new-dtags.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/base.scm (binutils): Update to 2.30. [source](patches): Remove obsolete patch. [arguments]: Add "--enable-new-dtags" in #:configure-flags. Marius Bakke
2018-03-16gnu: util-linux: Fix CVE-2018-7738....* gnu/packages/patches/util-linux-CVE-2018-7738.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/linux.scm (util-linux)[replacement]: New field. (util-linux/fixed): New variable. Leo Famulari
2018-03-16gnu: tar: Fix sparse file detection on Btrfs file systems....* gnu/packages/patches/tar-remove-wholesparse-check.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/base.scm (tar)[source]: Add patch. Mark H Weaver
2018-03-15gnu: shadow: Fix CVE-2018-7169....* gnu/packages/patches/shadow-CVE-2018-7169.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/admin.scm (shadow)[source]: Use it. Leo Famulari
2018-03-15gnu: python: Update to 3.6.4....* gnu/packages/patches/python-3-search-paths.patch: Adjust context. * gnu/packages/python.scm (python): Update to 3.6.4. [source]: Re-enable test_socket.py. Marius Bakke
2018-03-15gnu: glib: Update to 2.56.0....* gnu/packages/glib.scm (glib): Update to 2.56.0. [source](patches): Remove obsolete patch. [arguments]: Disable new MIME test. * gnu/packages/patches/glib-respect-datadir.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Marius Bakke
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