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2019-07-12gnu: Remove expat/fixed.Marius Bakke
The merge preceding this commit (fb9a23a3f3) ignored the replacement added in 5a836ce38c (gnu: expat: fix CVE-2018-20843), because the fix is already present in Expat 2.2.7. This commit removes the remaining bits. * gnu/packages/patches/expat-CVE-2018-20843.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/xml.scm (expat/fixed): Remove variable.
2019-07-12Merge branch 'master' into core-updatesMarius Bakke
Conflicts: gnu/local.mk gnu/packages/python-xyz.scm gnu/packages/xml.scm guix/gexp.scm po/guix/POTFILES.in
2019-07-12gnu: expat: fix CVE-2018-20843Jack Hill
* gnu/packages/xml.scm (expat)[replacement]: New field. (expat/fixed): New variable. * gnu/packages/patches/expat-CVE-2018-20843.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patch file. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-07-11gnu: sbcl-clx: Update to 0.7.5.Pierre Langlois
* gnu/packages/lisp.scm (sbcl-clx): Update to 0.7.5. [origin]: Drop "clx-remove-demo.patch" and the snippet that removes demo code. * gnu/packages/patches/clx-remove-demo.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-10gnu: cvs: Rename patch file.Efraim Flashner
* gnu/packages/version-control.scm (cvs)[source]: Rename patch. * gnu/packages/patches/cvs-2017-12836.patch: Rename to ... * gnu/packages/patches/cvs-CVE-2018-12836.patch: ... this. * gnu/local.mk (dist_patch_DATA): Register it.
2019-07-10gnu: libexif: Fix CVE-2018-20030.Efraim Flashner
* gnu/packages/photo.scm (libexif)[source]: Add patch. * gnu/packages/patches/libexif-CVE-2018-20030.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2019-07-10gnu: a2ps: Fix CVE-2015-8107.Efraim Flashner
* gnu/packages/pretty-print.scm (a2ps)[source]: Add patch. * gnu/packages/patches/a2ps-CVE-2015-8107.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2019-07-10gnu: plib: Fix CVE-2011-4620, CVE-2012-4552.Efraim Flashner
* gnu/packages/game-development.scm (plib)[patches]: Add patches. * gnu/packages/patches/plib-CVE-2011-4620.patch, gnu/packages/patches/plib-CVE-2012-4552.patch: New files. * gnu/local.mk (dist_patch_DATA): Register them.
2019-07-10gnu: rapidjson: Fix FTBFS with GCC 7.Marius Bakke
* gnu/packages/patches/rapidjson-gcc-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/web.scm (rapidjson)[source](patches): New field.
2019-07-09gnu: Python: Update to 3.7.4.Marius Bakke
* gnu/packages/python.scm (python-3.7): Update to 3.7.4. [source](snippet): Move disabled tests ... [arguments]<#:make-flags>: ... here. Enable previously failing tests. <#:phases>: Add 'set-TZDIR'. [native-inputs]: Add TZDATA-FOR-TESTS. * gnu/packages/commencement.scm (python-boot0)[arguments]: Clear <#:make-flags>. Delete 'set-TZDIR' phase. * gnu/packages/patches/python-3-fix-tests.patch: Disable two new tests that do not work in the build container. Adjust context.
2019-07-09gnu: make-glibc-locales: Adjust patch for glibc 2.29.Kei Kebreau
The patch for glibc 2.28 and earlier replaces the same content, but the context in the patch is different enough to fail to merge. * gnu/packages/base.scm (make-glibc-locales)[source]: Add patch. * gnu/packages/patches/glibc-locales.patch: Adjust for glibc 2.29 and move old file... * gnu/packages/patches/glibc-locales-2.28.patch: ...here. * gnu/local.mk (dist_patch_DATA): Add it.
2019-07-08gnu: glibc: Add 2.27 supported locales patch.Carl Dong
The 'glibc-supported-locales.patch' was updated for glibc 2.29, breaking compatibility with 2.27. Add a 2.27-specific supported locales patch. * gnu/packages/patches/glibc-2.27-supported-locales.patch: New file. * gnu/packages/base.scm (glibc-2.27)[source](patches): Use 'glibc-2.27-supported-locales.patch' instead. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2019-07-09gnu: grub: Update to 2.04.Tobias Geerinckx-Rice
* gnu/packages/bootloaders.scm (grub): Update to 2.04. [source]: Remove upstreamed patches. [arguments]: Don't require Python. Add a ‘disable-pixel-perfect-test’ phase to skip tests that fail with with our newer Unifont. * gnu/packages/patches/grub-efi-fat-serial-number.patch: Adjust context. * gnu/packages/patches/grub-binutils-compat.patch, gnu/packages/patches/grub-check-error-efibootmgr.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
2019-07-08gnu: gobject-introspection: Update absolute-shlib-path.patch.Christopher Baines
Incorporate some changes from nixpkgs to the gobject-introspection package patches. This is motivated by looking at issues with libsoup and lollypop. These changes mean that the share/gir-1.0/Soup-2.4.gir file within libsoup (and the corresponding binary typelib) references libsoup-2.4.so.1 with an absolute filename, whereas previously, the filename wasn't absolute. With an absolute filename in the typelib, loading libsoup from lollypop should work. * gnu/packages/patches/gobject-introspection-absolute-shlib-path.patch: Incorporate changes from nixpkgs.
2019-07-07gnu: Add csvkit.Pierre Langlois
* gnu/packages/wireservice.scm (csvkit): New variable. * gnu/packages/patches/csvkit-fix-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-07gnu: Add python-slugify.Pierre Langlois
* gnu/packages/python-web.scm (python-slugify): New variable. * gnu/packages/patches/python-slugify-depend-on-unidecode.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-04Merge branch 'staging' into core-updatesMarius Bakke
2019-07-03gnu: libxt: Update to 1.2.0.Marius Bakke
* gnu/packages/xorg.scm (libxt): Update to 1.2.0. * gnu/packages/patches/libxt-guix-search-paths.patch: Adjust for 1.2.0. While at it, trim spurious whitespaces.
2019-07-03gnu: monero: Update to 0.14.1.0.Guillaume LE VAILLANT
* gnu/packages/finance.scm (monero): Update to 0.14.1.0. * gnu/packages/patches/monero-use-system-miniupnpc.patch: Update file. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-03gnu: glib-networking: Update to 2.60.3.Marius Bakke
* gnu/packages/gnome.scm (glib-networking): Update to 2.60.3. [source](patches): Remove. [arguments]<#:phases>: Remove. * gnu/packages/patches/glib-networking-connection.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2019-07-02gnu: boost: Remove GCC5 workaround.Marius Bakke
* gnu/packages/patches/boost-fix-icu-build.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/boost.scm (boost)[source](patches): Remove. [arguments]: Do not pass "cxxflags".
2019-07-02Merge branch 'staging' into core-updatesMarius Bakke
2019-07-02gnu: WebKitGTK: Update to 2.24.3.Marius Bakke
* gnu/packages/webkit.scm (webkitgtk-2.24): Update to 2.24.3. [source](patches): Remove. * gnu/packages/patches/webkitgtk-sans-gstreamer-gl.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2019-07-02gnu: glibc: Update to 2.29.Marius Bakke
* gnu/packages/patches/glibc-bootstrap-system.patch, gnu/packages/patches/glibc-supported-locales.patch: Adjust for glibc 2.29. * gnu/packages/patches/glibc-2.28-supported-locales.patch, gnu/packages/patches/glibc-CVE-2019-7309.patch, gnu/packages/patches/glibc-CVE-2019-9169.patch, gnu/packages/patches/glibc-2.29-git-updates.patch: New files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/base.scm (glibc): Update to 2.29. [source](patches): Add 'glibc-CVE-2019-7309.patch', 'glibc-CVE-2019-9169.patch', and 'glibc-2.29-git-updates.patch'. Remove 'glibc-hurd-magic-pid.patch'. [native-inputs]: Add PYTHON-MINIMAL. (glibc-2.28): New public variable. * gnu/packages/commencement.scm (expat-sans-tests, python-boot0): New variables. (glibc-final-with-bootstrap-bash)[native-inputs]: Add PYTHON-BOOT0. * gnu/packages/python.scm (python-3.7)[arguments]: Disable test that fails with glibc 2.29.
2019-07-01gnu: guile-static-stripped: Adjust patches for 2.2.6.Ludovic Courtès
* gnu/packages/patches/guile-2.2-default-utf8.patch, gnu/packages/patches/guile-relocatable.patch: Adjust for Guile 2.2.6.
2019-06-30gnu: libssh2: Update to 1.9.0.Marius Bakke
* gnu/packages/patches/libssh2-fix-build-failure-with-gcrypt.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. * gnu/packages/ssh.scm (libssh2): Update to 1.9.0. [source](patches): Remove.
2019-06-29gnu: gstreamer: Fix buffer offset problem.Marius Bakke
* gnu/packages/patches/gstreamer-buffer-reset-offset.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gstreamer.scm (gstreamer)[source](patches): New field. [arguments]: Do not disable any tests.
2019-06-27Merge branch 'master' into core-updatesLudovic Courtès
2019-06-25gnu: Add leela-zero.Guillaume LE VAILLANT
* gnu/packages/games.scm (leela-zero): New variable. * gnu/packages/patches/leela-zero-gtest.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-06-25gnu: emacs-zones: Update to 0-2.3169815.Brian Leung
* gnu/packages/emacs-xyz.scm (emacs-zones): Update to 0-2.3169815. * gnu/packages/patches/emacs-zones-called-interactively.patch: Fix invocation of `called-interactively-p'.
2019-06-22gnu: python-pyatspi: Fix loading libraries.Julien Lepiller
* gnu/package/gnome.scm (python-pyatspi): Fix loading dependencies.
2019-06-21gnu: libcroco: Update to 0.6.13.Marius Bakke
* gnu/packages/patches/libcroco-CVE-2017-7960.patch, gnu/packages/patches/libcroco-CVE-2017-7961.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/gnome.scm (libcroco): Update to 0.6.13. [source](patches): Remove.
2019-06-21gnu: khmer: Update to 3.0.0a3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (khmer): Update to 3.0.0a3. [source]: Remove patch; remove seqan in snippet. [inputs]: Add seqan-1. * gnu/packages/patches/khmer-use-libraries.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2019-06-21gnu: Add lcalc.Andreas Enge
* gnu/packages/sagemath.scm (lcalc): New variable. * gnu/packages/patches/lcalc-default-parameters-1.patch, gnu/packages/patches/lcalc-default-parameters-2.patch, gnu/packages/patches/lcalc-lcommon-h.patch, gnu/packages/patches/lcalc-using-namespace-std.patch: New files. * gnu/local.mk (dist_patch_DATA): Register patches.
2019-06-21gnu: lrcalc: Add a patch for identifying include files.Andreas Enge
* gnu/packages/patches/lrcalc-includes.patch: New file. * gnu/packages/algebra.scm (lrcalc): Use patch. * gnu/local.mk (dist_patch_DATA): Register patch.
2019-06-20gnu: libgdata: Update to 0.17.9.Ricardo Wurmus
* gnu/packages/gnome.scm (libgdata): Update to 0.17.9. [inputs]: Move glib, json-glib, and libsoup from here... [propagated-inputs]: ...to here. * gnu/packages/patches/libgdata-fix-tests.patch: Remove file. * gnu/packages/patches/libgdata-glib-duplicate-tests.patch: Likewise. * gnu/local.mk (dist_patch_DATA): Remove patches.
2019-06-20gnu: gdm: Update to 3.30.2.Ricardo Wurmus
* gnu/packages/gnome.scm (gdm): Update to 3.30.2. [arguments]: Add --with-udevdir configure flag. [source]: Remove patch. * gnu/packages/patches/gdm-CVE-2018-14424.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2019-06-20gnu: gobject-introspection: Update to 1.58.1.Ricardo Wurmus
* gnu/packages/glib.scm (gobject-introspection): Update to 1.58.1. [source]: Remove snippet. [arguments]: Add phase "do-not-use-/usr/bin/env". [inputs]: Replace python-2 with python-wrapper; add zlib. [native-inputs]: Add autoconf and automake to be able to keep using the gnu-build-system. * gnu/packages/patches/gobject-introspection-cc.patch: Update patch to apply to latest version.
2019-06-20gnu: dbus: Update to 1.12.16.Marius Bakke
* gnu/packages/patches/dbus-CVE-2019-12749.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/glib.scm (dbus): Update to 1.12.16. [replacement]: Remove. (dbus/fixed): Remove variable.
2019-06-20Merge branch 'staging' into core-updatesMarius Bakke
2019-06-20gnu: dbus: Fix CVE-2019-12749.Marius Bakke
* gnu/packages/patches/dbus-CVE-2019-12749.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/glib.scm (dbus)[replacement]: New field. (dbus/fixed): New variable.
2019-06-20gnu: Add symmetrica.Nicolas Goaziou
* gnu/packages/algebra.scm (symmetrica): New variable. * gnu/packages/patches/symmetrica-bruch.patch: * gnu/packages/patches/symmetrica-int32.patch: * gnu/packages/patches/symmetrica-return_values.patch: * gnu/packages/patches/symmetrica-sort_sum_rename.patch: New files. * gnu/local.mk (dist_patch_DATA): Add patches.
2019-06-19gnu: emacs-unpackaged-el: Add patch for missing require statement.Brian Leung
* gnu/packages/emacs-xyz.scm (emacs-unpackaged-el)[source]: Add patch. * gnu/packages/patches/emacs-unpackaged-req.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-06-19gnu: Add ratpoints.Nicolas Goaziou
* gnu/packages/maths.scm (ratpoints): New variable. * gnu/packages/patches/ratpoints-sturm_and_rp_private.patch: New file. * gnu/local.mk (dist_patch_DATA): Reference patch.
2019-06-17gnu: open-zwave: Unbundle hidapi.Ludovic Courtès
* gnu/packages/patches/open-zwave-hidapi.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/zwave.scm (open-zwave)[source](patches): New field. (snippet): Delete 'cpp/hidapi'. [native-inputs]: Add PKG-CONFIG. [inputs]: Add HIDAPI.
2019-06-16gnu: dstat: Add two patches, fix two bugs.Tobias Geerinckx-Rice
* gnu/packages/admin.scm (dstat)[source]: Add patches. * gnu/packages/patches/dstat-fix-crash-when-specifying-delay.patch, gnu/packages/patches/dstat-skip-devices-without-io.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them.
2019-06-15gnu: poppler: Update to 0.77.0.Marius Bakke
* gnu/packages/patches/inkscape-poppler-0.76.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/inkscape.scm (inkscape)[source](patches): New field. * gnu/packages/patches/texlive-bin-luatex-poppler-compat.patch: Add two new hunks. * gnu/packages/pdf.scm (poppler): Update to 0.77.0. * gnu/packages/tex.scm (texlive-bin)[source]: Update Arch patches. [arguments]: Adjust accordingly. * gnu/packages/scribus.scm (scribus)[source](patches): Add two new origins.
2019-06-15gnu: libarchive: Update to 3.4.0.Marius Bakke
* gnu/packages/patches/libarchive-CVE-2018-1000877.patch, gnu/packages/patches/libarchive-CVE-2018-1000878.patch, gnu/packages/patches/libarchive-CVE-2018-1000880.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/backup.scm (libarchive): Update to 3.4.0. [source](uri): Add alternative download location. [source](patches): Remove.
2019-06-15gnu: Remove leftover patch.Marius Bakke
This is a follow-up to commit d680a8afd1190aac46742d3abf2a0de1a45ea10f. * gnu/packages/patches/inkscape-poppler-compat3.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2019-06-14gnu: Add benchmark.Gábor Boskovits
* gnu/packages/benchmark.scm(benchmark): New variable. * gnu/packages/patches/benchmark-unbundle-googletest.patch: New file. * gnu/local.mk(dist_patch_DATA): Add it.
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