Age | Commit message (Expand) | Author |
2023-01-08 | gnu: Add python-pydicom....* gnu/packages/python-science.scm (python-pydicom): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Antero Mejr |
2022-12-05 | gnu: python-sgp4: Move to astronomy....* gnu/packages/astronomy.scm: (python-sgp4): Move here from python-science.scm.
[description]: Expand description, annotate acronyms, add link to CelesTrak.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Sharlatan Hellseher |
2022-12-05 | gnu: python-sgp4: Update to 2.21....The latest version passes build on aarch64-linux system.
* gnu/packages/python-science.scm (python-sgp4): Update to 2.21.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Sharlatan Hellseher |
2022-12-02 | gnu: python-msgpack-numpy: Update to 0.4.8....* gnu/packages/python-science.scm (python-msgpack-numpy): Update to 0.4.8.
| Navid Afkhami |
2022-11-11 | gnu: Add python-tspex....* gnu/packages/python-science.scm (python-tspex): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
| Navid Afkhami |
2022-11-04 | gnu: Add python-pyts....* gnu/packages/python-science.scm (python-pyts): New variable.
| Ricardo Wurmus |
2022-10-18 | gnu: Add python-simple-pid....* gnu/packages/python-science.scm (python-simple-pid): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| jgart |
2022-09-29 | Merge branch 'master' into staging | Marius Bakke |
2022-09-28 | gnu: Add python-simplespectral....* gnu/packages/python-science.scm (python-simplespectral): New variable.
| Guillaume Le Vaillant |
2022-09-27 | Merge branch 'master' into staging....With resolved conflicts in:
gnu/local.mk
gnu/packages/crates-io.scm
| Maxim Cournoyer |
2022-09-25 | gnu: Add python-vaex-core....* gnu/packages/python-science.scm (python-vaex-core): New variable.
| Ricardo Wurmus |
2022-09-18 | gnu: python-cython: Remove duplicate version....* gnu/packages/python-xyz.scm (python-cython-0.29.32): Remove variable.
* gnu/packages/python-science.scm (python-pandas)[native-inputs]: Change from
PYTHON-CYTHON-0.29.32 to PYTHON-CYTHON.
| Marius Bakke |
2022-09-18 | gnu: python-pandas: Update to 1.4.4....* gnu/packages/python-science.scm (python-pandas): Update to 1.4.4.
[native-inputs]: Change from PYTHON-CYTHON to PYTHON-CYTHON-0.29.32.
| Marius Bakke |
2022-09-16 | gnu: python-scipy: Update to 1.9.1....* gnu/packages/python-science.scm (python-scipy): Update to 1.9.1.
[source]: Switch to GIT-FETCH.
[outputs]: Remove.
[arguments]: Don't disable Pythran. Don't configure OpenBLAS which is now
discovered by pkg-config. Do a "manual" PEP 517 style build. Make
install-doc phase conditional on the presence of Sphinx. Simplify tests.
[propagated-inputs]: Add PYTHON-PYTHRAN.
[native-inputs]: Remove PERL, WHICH, PYTHON-NUMPYDOC,
PYTHON-PYDATA-SPHINX-THEME, PYTHON-SPHINX, and PYTHON-SPHINX-PANELS. Add
GCC, PKG-CONFIG, PYTHON-PYPA-BUILD and PYTHON-MESON.
| Marius Bakke |
2022-09-14 | gnu: python-pingouin: Don't pin scikit-learn version....* gnu/packages/python-science.scm (python-pingouin)[arguments]: Add phase.
| Marius Bakke |
2022-09-11 | gnu: python-pingouin: Update to 0.5.2....* gnu/packages/python-science.scm (python-pingouin): Update to 0.5.2.
[arguments]: Adjust outdated substitution.
| Marius Bakke |
2022-09-10 | gnu: Add comments to the bottom of a few package modules....This will hopefully discourage patches which add new packages to the bottom of
files, as this increases the likelihood of conflicts when applying patches.
If there are more specific ways that packages should be arranged in specific
modules, this message can be updated accordingly.
* gnu/packages/bioconductor.scm: Add comment discouraging adding packages to
the bottom of the file.
* gnu/packages/bioinformatics.scm: ditto.
* gnu/packages/cran.scm: ditto.
* gnu/packages/crates-io.scm: ditto.
* gnu/packages/emacs-xyz.scm: ditto.
* gnu/packages/golang.scm: ditto.
* gnu/packages/guile-xyz.scm: ditto.
* gnu/packages/haskell-xyz.scm: ditto.
* gnu/packages/java.scm: ditto.
* gnu/packages/julia-xyz.scm: ditto.
* gnu/packages/lisp-xyz.scm: ditto.
* gnu/packages/ocaml.scm: ditto.
* gnu/packages/perl.scm: ditto.
* gnu/packages/python-science.scm: ditto.
* gnu/packages/python-xyz.scm: ditto.
* gnu/packages/ruby.scm: ditto.
* gnu/packages/tex.scm: ditto.
| Christopher Baines |
2022-09-07 | gnu: python-pyvista: Update to 0.36.1....* gnu/packages/python-science.scm (python-pyvista): Update to 0.36.1.
Signed-off-by: Marius Bakke <marius@gnu.org>
| Paul A. Patience |
2022-08-02 | gnu: python-pyvista: Update to 0.35.2....* gnu/packages/python-science.scm (python-pyvista): Update to 0.35.2.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| Paul A. Patience |
2022-08-02 | gnu: Add python-geosketch....* gnu/packages/python-science.scm (python-geosketch): New variable.
| Ricardo Wurmus |
2022-08-02 | gnu: Add python-fbpca....* gnu/packages/python-science.scm (python-fbpca): New variable.
| Ricardo Wurmus |
2022-07-15 | gnu: python-pyvista: Update to 0.35.1....* gnu/packages/python-science (python-pyvista): Update to 0.35.1.
Signed-off-by: Christopher Baines <mail@cbaines.net>
| Paul A. Patience |
2022-07-08 | gnu: Add python-opt-einsum....* gnu/packages/python-science.scm (python-opt-einsum): New variable.
| Ricardo Wurmus |
2022-07-03 | gnu: Add python-deepdish....* gnu/packages/python-science.scm (python-deepdish): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Antero Mejr |
2022-06-26 | gnu: python-modin: Update to 0.15.1....* gnu/packages/python-science.scm (python-modin): Update to 0.15.1.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Greg Hogan |
2022-06-18 | gnu: python-scikit-image: Update to 0.19.3....* gnu/packages/python-science.scm (python-scikit-image): Update to 0.19.3.
| Vinicius Monego |
2022-06-08 | gnu: Add PyGLM....* gnu/packages/python-science.scm (python-pyglm): New variable.
| Eric Bavier |
2022-05-31 | gnu: Remove python2-scipy....* gnu/packages/python-science.scm (python2-scipy): Delete variable.
(python-scipy)[properties]: Delete field.
| Maxim Cournoyer |
2022-05-31 | gnu: Remove python2-weave....* gnu/packages/python-science.scm (python2-weave): Delete variable.
| Maxim Cournoyer |
2022-05-31 | gnu: Remove python2-pandas....* gnu/packages/python-science.scm (python2-pandas): Delete variable.
(python-pandas): Delete related python2-variant property.
| Maxim Cournoyer |
2022-05-31 | gnu: python-distributed: Update to 2022.05.2....* gnu/packages/python-science.scm (python-distributed): Update to 2022.05.2.
[arguments]: Remove 'sanity-check phase; adjust 'check phase.
[propagated-inputs]: Add python-urllib3.
[native-inputs]: Add python-pytest-timeout and python-flaky.
| Ricardo Wurmus |
2022-05-29 | gnu: Add python-gpy....* gnu/packages/python-science.scm (python-gpy): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Wiktor Zelazny |
2022-05-29 | gnu: Add python-paramz....* gnu/packages/python-science.scm (python-paramz): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Wiktor Zelazny |
2022-05-29 | gnu: Add python-climin....* gnu/packages/python-science.scm (python-climin): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Wiktor Zelazny |
2022-05-23 | gnu: Add python-pyvista....* gnu/packages/python-science.scm (python-pyvista): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Paul A. Patience |
2022-05-20 | gnu: Add python-aplus....* gnu/packages/python-science.scm (python-aplus): New variable.
| Ricardo Wurmus |
2022-05-12 | gnu: python-pingouin: Update to 0.5.1....* gnu/packages/python-science.scm (python-pingouin): Update to 0.5.1.
| Maxim Cournoyer |
2022-05-12 | gnu: python-pandas: Update to 1.4.2....* gnu/packages/python-science.scm (python-pandas): Update to 1.4.2.
| Maxim Cournoyer |
2022-05-12 | gnu: python-pandas: Build and run tests in parallel....* gnu/packages/python-science.scm (python-pandas)
[phases]{enable-parallel-build}: New phase.
{check}: Add xdist -n option. Skip test_memory_usage test.
[native-inputs]: Add python-pytest-xdist.
| Maxim Cournoyer |
2022-05-12 | gnu: python-scipy: Update to 1.8.0 and enable parallel build....* gnu/packages/python-science.scm (python-scipy): Update to 1.8.0.
[modules]: New argument.
[phases]{disable-broken-tests}: Delete phase.
{configure-openblas}: Streamline configuration template.
{parallelize-build}: New phase.
{install-doc}: Move before 'check phase. Remove now extraneous
'add-installed-pythonpath' call. Remove the SPHINXBUILD and PYVER Make
variables, as well as conf.py patching. Provide SPHINXOPTS to build doc in
parallel. Simply recursively copy the 'html' output directory to install the
doc.
{check}: Remove extraneous INPUTS and OUTPUTS arguments. Start tests with the
'runtests.py' launcher, which accepts a '-j' argument to run the tests in
parallel.
[native-inputs]: Sort inputs. Add python-pytest-xdist and
python-threadpoolctl.
[home-page]: Update.
| Maxim Cournoyer |
2022-05-12 | gnu: python-scipy: Move input fields below arguments field....* gnu/packages/python-science.scm (python-scipy): Move inputs fields below the
arguments field.
[phases]: Use gexp.
{configure-openblas}: Use this-package-input.
{check}: Remove extraneous 'add-installed-pythonpath' call.
{install-doc}: Adjust accordingly.
| Maxim Cournoyer |
2022-05-06 | gnu: python-vedo: Update to 2022.2.0....* gnu/packages/python-science.scm (python-vedo): Update to 2022.2.0.
[arguments]: Add 'fix-tests' phase.
[inputs]: Move fenics and python-matplotlib to propagated-inputs.
Move python-pkgconfig from here...
[native-inputs]: ...to here.
[propagated-inputs]: Add python-deprecated (and fenics and
python-matplotlib).
[description]: Make description more accurate.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Paul A. Patience |
2022-05-06 | gnu: python-vedo: Disable sanity check....* gnu/packages/python-science.scm (python-vedo)[arguments]: Disable
sanity check.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Paul A. Patience |
2022-05-06 | gnu: python-vedo: Remove input labels....* gnu/packages/python-science.scm (python-vedo)[inputs]: Remove labels
and sort the inputs.
[propagated-inputs]: Remove labels.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Paul A. Patience |
2022-05-06 | gnu: python-vedo: Honor #:tests? flag....* gnu/packages/python-science.scm (python-vedo)[arguments]: Adjust
custom 'check' phase to honor the #:tests? flag. Also remove its
trailing boolean.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Paul A. Patience |
2022-05-06 | gnu: Add python-traittypes....* gnu/packages/python-science.scm (python-traittypes): New variable.
| Ricardo Wurmus |
2022-04-07 | gnu: Add python-trimesh....* gnu/packages/python-science.scm (python-trimesh): New variable.
Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
| Malte Frank Gerdes |
2022-03-31 | gnu: Add python-numpy-groupies....* gnu/packages/python-science.scm (python-numpy-groupies): New variable.
| Ricardo Wurmus |
2022-03-18 | gnu: Add python-scikit-allel....* gnu/packages/python-science.scm (python-scikit-allel): New variable.
| Efraim Flashner |
2022-03-17 | gnu: python-scipy: Adjust phases....* gnu/packages/python-science.scm (python-scipy)[arguments]: Replace
'check with custom 'check phase.
| Efraim Flashner |