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2021-06-22gnu: python-numpy, python-scipy: Remove dependency on lapack....The dependency on lapack was unused; the LAPACK interface of OpenBLAS is used instead. The dependency on lapack was added in cba256f8faaa18457fc9b77e8b401f17b89bdd75 (numpy) and 719b01c1575b8599b0dca9f245a9d759032f3168 (scipy). * gnu/packages/python-science.scm (python-scipy)[inputs]: Remove LAPACK. * gnu/packages/python-xyz.scm (python-numpy)[inputs]: Likewise. Ludovic Courtès
2021-06-14gnu: Add python-ruffus....* gnu/packages/python-science.scm (python-ruffus): New variable. Ricardo Wurmus
2021-06-02gnu: python-vedo: Make pkg-config a native input....* gnu/packages/python-science.scm (python-vedo)[inputs]: Move pkg-config to... [native-inputs]: ...here. Paul Garlick
2021-06-01gnu: Add python-vedo....* gnu/packages/python-science.scm (python-vedo): New variable. Paul Garlick
2021-05-31gnu: Add python-pyflow....* gnu/packages/python-science.scm (python-pyflow): New variable. Roel Janssen
2021-03-13gnu: python-scikit-image: Enable tests....* gnu/packages/python-science.scm (python-scikit-image)[arguments]: Add phases related to tests. [native-inputs]: Add python-codecov, python-flake8, python-pytest, python-pytest-cov, python-pytest-localserver, python-wheel. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Vinicius Monego
2021-03-13gnu: python-scikit-image: Update to 0.18.1....* gnu/packages/python-science.scm (python-scikit-image): Update to 0.18.1. [propagated-inputs]: Remove python-six. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Vinicius Monego
2021-03-12gnu: Add python-upsetplot....* gnu/packages/python-science.scm (python-upsetplot): New variable. Ricardo Wurmus
2021-03-12gnu: Add python-statannot....* gnu/packages/python-science.scm (python-statannot): New variable. Ricardo Wurmus
2021-02-09gnu: python-scipy: Update to 1.6.0....* gnu/packages/python-xyz.scm (python-scipy): Update to 1.6.0. [inputs]: Add pybind11. [arguments]<#:phases>['change-home-dir]: New phase. Signed-off-by: Jelle Licht <jlicht@fsfe.org> Greg Hogan
2020-11-24gnu: Add python-baycomp....* gnu/packages/python-science.scm (python-baycomp): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Vinicius Monego
2020-08-16gnu: Add python-sgp4....* gnu/packages/python-science.scm (python-sgp4): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Vinicius Monego
2020-08-10gnu: Add python-bottleneck....* gnu/packages/python-science.scm (python-bottleneck): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Vinicius Monego
2020-07-08gnu: python-scikit-image: Add dependencies....* gnu/packages/python-science.scm (python-scikit-image)[propagated-inputs]: Add python-imageio and python-tifffile. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Vinicius Monego
2020-07-08gnu: Add python-scikit-fuzzy....* gnu/packages/python-science.scm (python-scikit-fuzzy): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Vinicius Monego
2020-06-23gnu: Add python-msgpack-numpy....* gnu/packages/python-science.scm (python-msgpack-numpy): New variable. Ricardo Wurmus
2020-06-23gnu: python-scikit-image: Update to 0.17.2....* gnu/packages/python-science.scm (python-scikit-image): Update to 0.17.2. Ricardo Wurmus
2020-06-22gnu: Add python-xarray....From 27ec21904f769c1e8114f767972d9037e1e9f68a Mon Sep 17 00:00:00 2001 From: Pierre Langlois <pierre.langlois@gmx.com> Date: Thu, 18 Jun 2020 00:58:02 +0200 Subject: [PATCH 4/5] gnu: Add python-xarray. * gnu/package/python-science.scm (python-xarray): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Pierre Langlois
2020-06-22gnu: python-pandas: Update to 1.0.5....But also keep version 0.25.3 around for packages requiring an earlier versions, as well as version 0.24.2 for a version with python2. * gnu/packages/python-science.scm (python-pandas): Update to 1.0.5. [arguments]: Adapt 'patch-which phase. Add new 'prepare-x phase. Do not delete tests that depend on "moto", they are skipped automatically. [propagated-inputs]: Add python-jinja2. [inputs]: Add xsel and xclip. [native-inputs]: Add xorg-server-for-tests so we can test clipboard support. (python-pandas-0.24): New variable. (python2-pandas): Inherit from python-pandas-0.25. * gnu/packages/bioinformatics.scm (python-biom-format)[propagated-inputs]: Switch to python-pandas-0.25. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Pierre Langlois
2020-04-30gnu: Add python2-weave....* gnu/packages/python-science.scm (python2-weave): New variable. Ricardo Wurmus
2020-04-09gnu: Remove python2-scikit-image....Some of the packages that this depends upon no longer supports Python 2. * gnu/packages/python-science.scm (python2-scikit-image): Remove variable. Marius Bakke
2020-03-15gnu: python2-pandas: Fix build with Python 2.7.17....While at it, fix the inheritance. * gnu/packages/python-science.scm (python2-pandas): Use INHERIT instead of PACKAGE/INHERIT. [source](modules, snippet): New fields. Marius Bakke
2020-02-19gnu: python-scikit-image: Use HTTPS home page....* gnu/packages/python-science.scm (python-scikit-image)[home-page]: Use HTTPS. Tobias Geerinckx-Rice
2020-01-15gnu: python-lxml: Move to (gnu packages xml)....* gnu/packages/python-xyz.scm (python-lxml): Move from here ... * gnu/packages/xml.scm (python-lxml): ... to here. * gnu/packages/django.scm, gnu/packages/drones.scm, gnu/packages/libreoffice.scm, gnu/packages/nutrition.scm, gnu/packages/openstack.scm, gnu/packages/pulseaudio.scm, gnu/packages/python-science.scm, gnu/packages/tryton.scm, gnu/packages/wireservice.scm: Adjust module imports. Marius Bakke
2019-12-04gnu: python-pandas: Move to (gnu packages python-science)....* gnu/packages/python-xyz.scm (python-pandas, python2-pandas): Move from here... * gnu/packages/python-science.scm (python-pandas, python2-pandas): ...to here. * gnu/packages/benchmark.scm, gnu/packages/databases.scm, gnu/packages/graph.scm, gnu/packages/parallel.scm, gnu/packages/serialization.scm: Import (gnu packages python-science). Ricardo Wurmus
2019-12-02gnu: python-scipy: Move to (gnu packages python-science)....* gnu/packages/python-xyz.scm (python-scipy, python2-scipy): Move these from here... * gnu/packages/python-science.scm (python-scipy, python2-scipy): ...to here. * gnu/packages/bioinformatics.scm, gnu/packages/machine-learning.scm, gnu/packages/statistics.scm: Adjust module imports. Ricardo Wurmus
2019-12-02gnu: python-scikit-image: Move to (gnu packages python-science)....* gnu/packages/python-xyz.scm (python-scikit-image, python2-scikit-image): Move these two from here... * gnu/packages/python-science.scm: ...to this new file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. Ricardo Wurmus
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