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2023-08-14gnu: python-setuptools-rust: Update to 1.6.0....* gnu/packages/python-xyz.scm (python-setuptools-rust): Update to 1.6.0. [build-system]: Switch to pyproject-build-system. [native-inputs]: Remove python-setuptools-scm. Efraim Flashner
2023-08-01 gnu: Add python-pyment... * gnu/packages/python-xyz.scm (python-pyment): New public variable. jgart
2023-08-01gnu: snakemake-7: Fix version reporting....* gnu/packages/python-xyz.scm (snakemake-7)[arguments]: Add phase 'patch-version and use G-exp. [build-system]: Use pyproject-build-system. Ricardo Wurmus
2023-08-01gnu: snakemake-6: Fix version reporting....* gnu/packages/python-xyz.scm (snakemake-6)[arguments]: Add phase 'patch-version and use G-exp. [build-system]: Use pyproject-build-system. Ricardo Wurmus
2023-07-23gnu: python-srsly: Update to 2.4.7....* gnu/packages/python-xyz.scm (python-srsly): Update to 2.4.7. Tobias Geerinckx-Rice
2023-07-23gnu: python-llfuse: Update to 1.4.4....* gnu/packages/python-xyz.scm (python-llfuse): Update to 1.4.4. Tobias Geerinckx-Rice
2023-07-23gnu: fuse@3: Bind to default FUSE variable....* gnu/packages/linux.scm (fuse): Rename this… (fuse-2): …to this, and… (fuse-3): …rename this… (fuse): …to this! (fuse-static): Rename this… (fuse-2-static): …to this. Adjust all users. Tobias Geerinckx-Rice
2023-07-19gnu: python-nbconvert: Remove texlive-updmap.cfg as propagated input....`texlive-updmap.cfg' builds "updmap.cfg" file for texlive packages in native inputs, because those do not benefit from the profile hook doing the very same thing. Consequently, `texlive-updmap.cfg' should not appear in propagated inputs. Moreover, XeTeX do not rely on "updmap.cfg" to find fonts; this is a second reason to remove it from propagated inputs in this particular package. * gnu/packages/python-xyz.scm (python-nbconvert)[propagated-inputs]: Remove TEXLIVE-UPDMAP.CFG call. Add TEXLIVE-COLLECTION-BASIC. Remove TEXLIVE-IFTEX, which is already included in TEXLIVE-COLLECTION-BASIC. Sort inputs alphabetically. Nicolas Goaziou
2023-07-19gnu: python-nbconvert: Fix build....This fixes <https://issues.guix.gnu.org/64729>. * gnu/packages/python-xyz.scm (python-nbconvert)[propagated-inputs]: Add TEXLIVE-ENVIRON, TEXLIVE-PDFCOL, TEXLIVE-PGF, and TEXLIVE-XETEX. Nicolas Goaziou
2023-07-16gnu: python-sshtunnel: Fix build....* gnu/packages/python-xyz.scm (python-sshtunnel)[native-inputs]: Add python-mock. Tobias Geerinckx-Rice
2023-07-16gnu: python-wand: Fix build....Fixes <https://issues.guix.gnu.org/64350>. * gnu/packages/python-xyz.scm (python-wand)[arguments]<#:phases>: Pass tests? to 'check. Reported-by: Thorsten Wilms <t_w_@freenet.de> Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr> Hilton Chain
2023-07-18gnu: python-numpy-documentation: Fix build....* gnu/packages/python-xyz.scm (python-numpy-documentation)[native-inputs]: Use TEXLIVE-UPDMAP.CFG. Add TEXLIVE-LATEXMK and TEXLIVE-XETEX. Nicolas Goaziou
2023-07-18gnu: python-ipython-documentation: Fix build....* gnu/packages/python-xyz.scm (python-ipython-documentation)[native-inputs]: Use TEXLIVE-UPDMAP.CFG. Add TEXLIVE-LATEXMK and TEXLIVE-XETEX. Nicolas Goaziou
2023-07-18gnu: Rationalize texlive-updmap.cfg and texlive-tiny inputs....TEXLIVE-UPDMAP.CFG and TEXLIVE-TINY should only be used as native inputs. Also remove texlive packages already provided by them. * doc/build.scm (pdf-manual): * gnu/packages/algebra.scm (pari-gp): * gnu/packages/bioinformatics.scm (discrover): (phyml): (velvet): * gnu/packages/chemistry.scm (yaehmop): * gnu/packages/chez.scm (stex-bootstrap): (chez-web): (chez-sockets): * gnu/packages/cran.scm (r-prereg): * gnu/packages/docbook.scm (dblatex): * gnu/packages/emacs-xyz.scm (emacs-auctex): * gnu/packages/engineering.scm (fastcap): * gnu/packages/fsf.scm (book-faif): * gnu/packages/graphviz.scm (dot2tex): * gnu/packages/maths.scm (hypre): * gnu/packages/ocaml.scm (unison): (ocaml-bibtex2html): * gnu/packages/plotutils.scm (asymptote): * gnu/packages/python-xyz.scm (python-nbconvert): (python-pypandoc): * gnu/packages/radio.scm (gnuradio): (libosmo-dsp): * gnu/packages/statistics.scm (r-with-tests): * gnu/packages/tex.scm (texlive-makecmds): (texlive-innerscript): (teximpatient): (texlive-xkeyval): Remove texlive packages already provided by TEXLIVE-UPDMAP.CFG. Don't add TEXLIVE-TINY or TEXLIVE-UPDMAP.CFG as inputs. Nicolas Goaziou
2023-07-18gnu: texlive-jknappen: Deprecate package....* gnu/packages/tex.scm (texlive-jknappen): Deprecate variable. (texlive-paralist): (texlive-jadetex): (texlive-xindy): * gnu/packages/maths.scm (hypre): * gnu/packages/python-xyz.scm (python-nbconvert): Use TEXLIVE-JKNAPLTX instead. Nicolas Goaziou
2023-07-18gnu: texlive-fonts-rsfs -> texlive-rsfs....* gnu/packages/tex.scm (texlive-rsfs): New variable. (texlive-fonts-rsfs): Deprecate variable. * gnu/packages/docbook.scm (dblatex)[inputs]: * gnu/packages/python-xyz.scm (python-nbconvert)[propagated-inputs]: Use new name. Nicolas Goaziou
2023-07-18gnu: texlive-latex-ucs -> texlive-ucs....* gnu/packages/tex.scm (texlive-ucs): New variable. (texlive-latex-ucs): Deprecate variable. * gnu/packages/python-xyz.scm (python-nbconvert)[propagated-inputs]: Use new name. Nicolas Goaziou
2023-07-18gnu: texlive-latex-type1cm -> texlive-type1cm....* gnu/packages/tex.scm (texlive-type1cm): New variable. (texlive-latex-type1cm): Deprecate variable. * gnu/packages/python-xyz.scm (python-matplotlib-documentation)[native-inputs]: Use new name. Re-order alphabetically. Nicolas Goaziou
2023-07-18gnu: texlive-latex-parskip -> texlive-parskip....* gnu/packages/tex.scm (texlive-parskip): New variable. (texlive-latex-parskip): Deprecate variable. * gnu/packages/maths.scm (hypre): * gnu/packages/plotutils.scm (asymptote): * gnu/packages/python-xyz.scm (python-nbconvert): * gnu/packages/sphinx.scm (python-sphinx): Use new name. Nicolas Goaziou
2023-07-18gnu: texlive-latex-jknapltx -> texlive-jknapltx....* gnu/packages/tex.scm (texlive-jknapltx): New variable. (texlive-latex-jknapltx): Deprecate variable. * gnu/packages/docbook.scm (dblatex): * gnu/packages/python-xyz.scm (python-nbconvert): Use new name. Nicolas Goaziou
2023-07-18gnu: texlive-latex-float -> texlive-float....* gnu/packages/tex.scm (texlive-float): New variable. (texlive-latex-float): Deprecate variable. (texlive-showexpl): (texlive-minted): (texlive-apa6): * gnu/packages/docbook.scm (dblatex): * gnu/packages/maths.scm (hypre): * gnu/packages/python-xyz.scm (python-nbconvert): * gnu/packages/sphinx.scm (python-sphinx): Use new name. Nicolas Goaziou
2023-07-18gnu: texlive-fonts-ec -> texlive-ec....* gnu/packages/tex.scm (texlive-ec): New variable. (texlive-fonts-ec): Deprecate variable. (lyx): (biber): * gnu/packages/python-xyz.scm (python-pypandoc): * gnu/packages/statistics.scm (r-with-tests): * doc/build.scm (pdf-manual): * gnu/packages/bioinformatics.scm (discrover): (phyml): (velvet): * gnu/packages/chemistry.scm (yaehmop): * gnu/packages/chez.scm (stex-bootstrap): * gnu/packages/ocaml.scm (unison): (ocaml-bibtex2html): * gnu/packages/plotutils.scm (asymptote): Use new name. Nicolas Goaziou
2023-07-18gnu: texlive-latex-upquote -> texlive-upquote....* gnu/packages/tex.scm (texlive-upquote): New variable. (texlive-latex-upquote): Deprecate variable. * gnu/packages/cran.scm (r-prereg): * gnu/packages/maths.scm (hypre): * gnu/packages/python-xyz.scm (python-nbconvert): * gnu/packages/sphinx.scm (python-sphinx): * gnu/packages/statistics.scm (r-with-tests): Use new name. Nicolas Goaziou
2023-07-18gnu: texlive-latex-geometry -> texlive-geometry....* gnu/packages/tex.scm (texlive-geometry): New variable. (texlive-latex-geometry): Deprecate variable. (texlive-xindy): * gnu/packages/chemistry.scm (yaehmop): * gnu/packages/cran.scm (r-prereg): * gnu/packages/graphviz.scm (dot2tex): * gnu/packages/maths.scm (hypre): * gnu/packages/plotutils.scm (asymptote): * gnu/packages/python-xyz.scm (python-nbconvert): * gnu/packages/sphinx.scm (python-sphinx): Use new name. Nicolas Goaziou
2023-07-18gnu: texlive-latex-expdlist -> texlive-expdlist....* gnu/packages/tex.scm (texlive-expdlist): New variable. (texlive-latex-expdlist): Deprecate variable. * gnu/packages/python-xyz.scm (python-numpy-documentation): (python-matplotlib-documentation): Apply renaming. Nicolas Goaziou
2023-07-18gnu: texlive-latex-trimspaces -> texlive-trimspaces....* gnu/packages/tex.scm (texlive-trimspaces): New variable. (texlive-latex-trimspaces): (texlive-pstool): * gnu/packages/python-xyz.scm (python-nbconvert): Nicolas Goaziou
2023-07-15gnu: python-dask: Update to 2023.7.0....* gnu/packages/python-xyz.scm (python-dask): Update to 2023.7.0. Ricardo Wurmus
2023-07-14gnu: Add python-makefun....* gnu/packages/python-xyz.scm (python-makefun): New variable. Signed-off-by: John Kehayias <john.kehayias@protonmail.com> John Kehayias
2023-07-13gnu: python-mizani: Fix embedded version string....* gnu/packages/python-xyz.scm (python-mizani)[native-inputs]: Add python-setuptools-scm to correct embedded version form 0.0.0 to 0.9.2. Ricardo Wurmus
2023-07-11gnu: Add python-redo....* gnu/packages/python-xyz.scm (python-redo): New variable. AwesomeAdam54321
2023-07-11gnu: Add python-cloup....* gnu/packages/python-xyz.scm (python-cloup): New variable. Co-authored-by: jgart <jgart@dismail.de> Daniel Meißner
2023-07-10gnu: bpython: Update to 0.24....* gnu/packages/python-xyz.scm (bpython): Update to 0.24. [propagated-inputs]: Remove python-six. Signed-off-by: Christopher Baines <mail@cbaines.net> Paul A. Patience
2023-07-10gnu: python-blessed: Add missing dependency....Fixes the build of python-curtsies. The python-six dependency was accidentally removed in commit 9e1cbc62e54513ce92f7fc282700c87c93bfd25c. * gnu/packages/python-xyz.scm (python-blessed)[propagated-inputs]: Add python-six. Signed-off-by: Christopher Baines <mail@cbaines.net> Paul A. Patience
2023-07-08gnu: python-pyzmq: Enable the draft test....* gnu/packages/python-xyz.scm (python-pyzmq) [arguments]: Delete the disable-problematic-tests phase and add a configure phase. Maxim Cournoyer
2023-07-06gnu: python-pikepdf: Update to 7.2.0....* gnu/packages/python-xyz.scm (python-pikepdf): Update to 7.2.0. [native-inputs]: Remove PYTHON-SETUPTOOLS, PYTHON-SETUPTOOLS-SCM, PYTHON-SETUPTOOLS-SCM-GIT-ARCHIVE, PYTHON-TOML, PYTHON-WHEEL. Add PYTHON-ATTRS, PYTHON-COVERAGE, PYTHON-HYPOTHESIS, PYTHON-PSUTIL, PYTHON-PYTEST, PYTHON-PYTEST-COV, PYTHON-PYTEST-TIMEOUT, PYTHON-PYTEST-XDIST, PYTHON-DATEUTIL, PYTHON-TOMLI. [propagated-inputs]: Remove PYTHON-LXML. Add PYTHON-DEPRECATION, PYTHON-PACKAGING, PYTHON-PILLOW. Nicolas Goaziou
2023-07-03gnu: Add python-cesium....* gnu/packages/python-xyz.scm (python-cesium): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Navid Afkhami
2023-07-03gnu: python-xopen: Update to 1.7.0....* gnu/packages/python-xyz.scm (python-xopen): Update to 1.7.0. [build-system]: Use pyproject-build-system. [propagated-inputs]: Add pigz, python-isal, and python-typing-extensions; move python-setuptools-scm from here... [native-inputs]: ...to here; add python-pytest and python-pytest-timeout. [description]: Reflow. Ricardo Wurmus
2023-07-01gnu: python-pyelftools: Update to 0.29....* gnu/packages/python-xyz.scm (python-pyelftools): Update to 0.29. Vagrant Cascadian
2023-07-01gnu: python-aiofiles: Update to 23.1.0....* gnu/packages/python-xyz.scm (python-aiofiles): Update to 23.1.0. Signed-off-by: Andrew Tropin <andrew@trop.in> Arjan Adriaanse
2023-06-29gnu: Add python-lazy-loader....* gnu/packages/python-xyz.scm (python-lazy-loader): New variable. Arun Isaac
2023-06-29gnu: Add python-rasterio....* gnu/packages/python-xyz.scm (python-rasterio): New variable. Ricardo Wurmus
2023-06-29gnu: Add python-affine....* gnu/packages/python-xyz.scm (python-affine): New variable. Ricardo Wurmus
2023-06-29gnu: Add python-snuggs....* gnu/packages/python-xyz.scm (python-snuggs): New variable. Ricardo Wurmus
2023-06-26gnu: python-cftime: Update to 1.6.2....* gnu/packages/python-xyz.scm (python-cftime): Update to 1.6.2. [build-system]: Use pyproject-build-system. Signed-off-by: Christopher Baines <mail@cbaines.net> Felix Gruber
2023-06-25gnu: Add python-fastprogress....* gnu/packages/python-xyz.scm (python-fastprogress): New variable. Vinicius Monego
2023-06-24gnu: python-codespell: Update to 2.2.5....* gnu/packages/python-xyz.scm (python-codespell): Update to 2.2.5. Efraim Flashner
2023-06-20gnu: python-dask: Add missing input....* gnu/packages/python-xyz.scm (python-dask)[propagated-inputs]: Add python-import-metadata. Ricardo Wurmus
2023-06-19gnu: python-cython-next: Update to 3.0.0b2....* gnu/packages/python-xyz.scm (python-cython-next): Update to 3.0.0b2. Signed-off-by: Christopher Baines <mail@cbaines.net> Andy Tai
2023-06-18gnu: python-pyzmq: Reinstate two tests....* gnu/packages/python-xyz.scm (python-pyzmq) [arguments]: Reinstate the test_auth and test_zmqstream tests, fixed in the last 25.1.0 version. Maxim Cournoyer
2023-06-16gnu: Add python-pdoc....* gnu/packages/python-xyz.scm (python-pdoc): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Ontje Lünsdorf
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