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2019-01-15gnu: Separate Python core packages from the rest....* gnu/packages/python.scm: Move hundreds of package definitions from here... * gnu/packages/python-xyz.scm: ...to this new module. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * gnu/packages/ada.scm, gnu/packages/admin.scm, gnu/packages/android.scm, gnu/packages/audio.scm, gnu/packages/backup.scm, gnu/packages/benchmark.scm, gnu/packages/bioinformatics.scm, gnu/packages/bittorrent.scm, gnu/packages/calendar.scm, gnu/packages/check.scm, gnu/packages/chemistry.scm, gnu/packages/cluster.scm, gnu/packages/compression.scm, gnu/packages/connman.scm, gnu/packages/crypto.scm, gnu/packages/cups.scm, gnu/packages/databases.scm, gnu/packages/dav.scm, gnu/packages/direct-connect.scm, gnu/packages/disk.scm, gnu/packages/django.scm, gnu/packages/dlang.scm, gnu/packages/docker.scm, gnu/packages/ebook.scm, gnu/packages/elf.scm, gnu/packages/emacs.scm, gnu/packages/emulators.scm, gnu/packages/engineering.scm, gnu/packages/enlightenment.scm, gnu/packages/finance.scm, gnu/packages/fltk.scm, gnu/packages/fontutils.scm, gnu/packages/freedesktop.scm, gnu/packages/game-development.scm, gnu/packages/games.scm, gnu/packages/geo.scm, gnu/packages/gl.scm, gnu/packages/glib.scm, gnu/packages/gnome.scm, gnu/packages/gnupg.scm, gnu/packages/gnuzilla.scm, gnu/packages/graph.scm, gnu/packages/graphics.scm, gnu/packages/graphviz.scm, gnu/packages/gtk.scm, gnu/packages/ham-radio.scm, gnu/packages/image-processing.scm, gnu/packages/image-viewers.scm, gnu/packages/image.scm, gnu/packages/irc.scm, gnu/packages/jrnl.scm, gnu/packages/julia.scm, gnu/packages/kde-frameworks.scm, gnu/packages/key-mon.scm, gnu/packages/libffi.scm, gnu/packages/libreoffice.scm, gnu/packages/libusb.scm, gnu/packages/lirc.scm, gnu/packages/logging.scm, gnu/packages/machine-learning.scm, gnu/packages/mail.scm, gnu/packages/mate.scm, gnu/packages/maths.scm, gnu/packages/medical.scm, gnu/packages/messaging.scm, gnu/packages/monitoring.scm, gnu/packages/mp3.scm, gnu/packages/mpd.scm, gnu/packages/music.scm, gnu/packages/networking.scm, gnu/packages/nutrition.scm, gnu/packages/openldap.scm, gnu/packages/openstack.scm, gnu/packages/package-management.scm, gnu/packages/password-utils.scm, gnu/packages/patchutils.scm, gnu/packages/pdf.scm, gnu/packages/photo.scm, gnu/packages/polkit.scm, gnu/packages/protobuf.scm, gnu/packages/python-crypto.scm, gnu/packages/python-web.scm, gnu/packages/qt.scm, gnu/packages/rdf.scm, gnu/packages/ruby.scm, gnu/packages/search.scm, gnu/packages/selinux.scm, gnu/packages/serialization.scm, gnu/packages/shells.scm, gnu/packages/simulation.scm, gnu/packages/ssh.scm, gnu/packages/statistics.scm, gnu/packages/storage.scm, gnu/packages/sync.scm, gnu/packages/terminals.scm, gnu/packages/textutils.scm, gnu/packages/time.scm, gnu/packages/tls.scm, gnu/packages/tor.scm, gnu/packages/tryton.scm, gnu/packages/version-control.scm, gnu/packages/video.scm, gnu/packages/virtualization.scm, gnu/packages/vpn.scm, gnu/packages/web-browsers.scm, gnu/packages/web.scm, gnu/packages/wicd.scm, gnu/packages/xdisorg.scm, gnu/packages/xorg.scm: Update module references. Ricardo Wurmus
2018-12-21gnu: python-rdflib: Update to 4.2.2....* gnu/packages/rdf.scm (python-rdflib): Update to 4.2.2. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Pjotr Prins
2018-11-11gnu: lrdf: Replace bootstrap phase....* gnu/packages/rdf.scm (lrdf)[arguments]: Remove autoreconf phase; replace bootstrap phase instead. Ricardo Wurmus
2018-11-11gnu: lrdf: Fetch sources from git....* gnu/packages/rdf.scm (lrdf)[source]: Fetch from git. Ricardo Wurmus
2018-08-15gnu: serd: Update to 0.30.0....* gnu/packages/rdf.scm (serd): Update to 0.30.0. Tobias Geerinckx-Rice
2018-08-10gnu: sord: Update to 0.16.2....* gnu/packages/rdf.scm (sord): Update to 0.16.2. Tobias Geerinckx-Rice
2018-06-22gnu: Use HTTPS for drobilla.net URIs....* gnu/packages/audio.scm (jalv, lilv, patchage, raul, raul-devel) (sratom, suil)[source, home-page]: Use HTTPS. * gnu/packages/gtk.scm (ganv, ganv-devel)[source, home-page]: Likewise. * gnu/packages/music.scm (ingen)[source, home-page]: Likewise. * gnu/packages/rdf.scm (serd, sord)[source, home-page]: Likewise. Tobias Geerinckx-Rice
2018-04-12Merge branch 'master' into core-updatesMark H Weaver
2018-04-12gnu: lrdf: Update to 0.6.1....* gnu/packages/rdf.scm (lrdf): Update to 0.6.1. [source](uri): Adjust to version prefix. [arguments]: Remove obsolete deletions. [inputs]: Remove OPENSSL. Marius Bakke
2018-04-12gnu: sord: Return #t from all phases....* gnu/packages/rdf.scm (sord)[arguments]: Return #t from the 'set-ldflags' phase. Mark H Weaver
2018-04-12gnu: serd: Return #t from all phases....* gnu/packages/rdf.scm (serd)[arguments]: Return #t from the 'set-ldflags' phase. Mark H Weaver
2018-02-08gnu: serd: Update to 0.28.0....* gnu/packages/rdf.scm (serd): Update to 0.28.0. Tobias Geerinckx-Rice
2017-11-18gnu: Move date/time packages from python.scm to time.scm....* gnu/packages/python.scm (python-pytz, python2-pytz, python-dateutil, python2-dateutil, python-parsedatetime, python2-parsedatetime, python-tzlocal, python-isodate, python2-isodate, python-iso8601, python2-iso8601, python-monotonic, python2-monotonic, python-pyrfc3339, python2-pyrfc3339, python-arrow, python2-arrow, python-aniso8601, python2-aniso8601): Move from here... * gnu/packages/time.scm: ...to here. * gnu/packages/calendar.scm, gnu/packages/check.scm, gnu/packages/django.scm, gnu/packages/ebook.scm, gnu/packages/gnome.scm, gnu/packages/irc.scm, gnu/packages/jrnl.scm, gnu/packages/mail.scm, gnu/packages/openstack.scm, gnu/packages/package-management.scm, gnu/packages/python-crypto.scm, gnu/packages/python-web.scm, gnu/packages/rdf.scm, gnu/packages/statistics.scm, gnu/packages/tls.scm, gnu/packages/tryton.scm, gnu/packages/version-control.scm: Adjust accordingly. Ricardo Wurmus
2017-11-17gnu: Move testing packages from python.scm to check.scm....* gnu/packages/python.scm (python-behave-web-api, python2-behave-web-api, python-mock, python2-mock, python-mock-2, python-nose, python2-nose, python-nose2, python2-nose2, python-unittest2, python2-unittest2, python-pytest, python2-pytest, python-pytest-3.0, python2-pytest-3.0, python-pytest-cov, python2-pytest-cov, python-pytest-runner, python2-pytest-runner, python-pytest-mock, python2-pytest-mock, python-pytest-xdist, python2-pytest-xdist, python-scripttest, python2-scripttest, python-testtools, python2-testtools, python-testscenarios, python2-testscenarios, python-testresources, python2-testresources, python-subunit, python2-subunit, python-fixtures, python2-fixtures, python-testrepository, python2-testrepository, python-coverage, python2-coverage, python-cov-core, python2-cov-core, python-testpath, python2-testpath, python-testlib, python2-testlib, python-pytest-cache, python2-pytest-cache, python-pytest-localserver, python-pytest-xprocess, python-pytest-subtesthack, python2-pytest-subtesthack, python-hypothesis, python2-hypothesis, python-lit, python2-lit, python-pytest-pep8, python2-pytest-pep8, python-pytest-flakes, python2-pytest-flakes, python2-coverage-test-runner, python-pylint, python2-pylint, python-paramunittest, python2-python-paramunittest, python-pytest-warnings, python2-pytest-warnings, python-pytest-capturelog, python2-pytest-capturelog, python-pytest-catchlog, python2-pytest-catchlog, python-nosexcover, python2-nosexcover, python-discover, python2-discover, behave, python-rednose, python2-rednose, python-nose-randomly, python2-nose-randomly, python-nose-timer, python2-nose-timer): Move from here... * gnu/packages/check.scm: ...to here. * gnu/packages/admin.scm, gnu/packages/android.scm, gnu/packages/backup.scm, gnu/packages/bioinformatics.scm, gnu/packages/calendar.scm, gnu/packages/dav.scm, gnu/packages/django.scm, gnu/packages/freedesktop.scm, gnu/packages/haskell.scm, gnu/packages/image.scm, gnu/packages/irc.scm, gnu/packages/jrnl.scm, gnu/packages/ldc.scm, gnu/packages/libffi.scm, gnu/packages/mail.scm, gnu/packages/mpd.scm, gnu/packages/openstack.scm, gnu/packages/package-management.scm, gnu/packages/password-utils.scm, gnu/packages/python-crypto.scm, gnu/packages/python-web.scm, gnu/packages/rdf.scm, gnu/packages/statistics.scm, gnu/packages/storage.scm, gnu/packages/time.scm, gnu/packages/tls.scm, gnu/packages/tor.scm, gnu/packages/tryton.scm: Adjust accordingly. Ricardo Wurmus
2017-11-13gnu: Move web packages from python to python-web....This is in part to address <https://bugs.gnu.org/27284>. * gnu/packages/python.scm (python-httplib2, python2-httplib2) (python-sockjs-tornado, python2-sockjs-tornado) (python-flask-babel, python2-flask-babel) (python-html5lib, python2-html5lib) (python-html5lib-0.9, python2-html5lib-0.9) (python-html5-parser, python2-html5-parser) (python-webencodings, python2-webencodings) (python-openid, python2-openid, python-cssutils, python2-cssutils) (python-cssselect, python2-cssutils) (python-openid-cla, python2-openid-cla) (python-openid-teams, python2-openid-teams) (python-tornado, python2-tornado) (python-tornado-http-auth, python-terminado, python2-terminado) (python-webob, python2-webob, python-zope-event, python2-zope-event) (python-zope-interface, python2-zope-interface) (python-zope-exceptions, python2-zope-exceptions) (python-zope-testing, python2-zope-testing) (python-zope-testrunner, python2-zope-testrunner) (python-zope-i18nmessageid, python2-zope-i18nmessageid) (python-zope-schema, python2-zope-schema) (python-zope-configuration, python2-zope-configuration) (python-zope-proxy, python2-zope-proxy) (python-zope-location, python2-zope-location) (python-zope-security, python2-zope-security) (python-zope-component, python2-zope-component) (python-ndg-httpsclient, python2-ndg-httpsclient) (python-websocket-client, python2-websocket-client) (python-requests-toolbelt, python2-requests-toolbelt) (python-rauth, python2-rauth, python-urllib3, python2-urllib3) (awscli, python-wsgiproxy2, python2-wsgiproxy2) (python-pastedeploy, python2-pastedeploy) (python-webtest, python2-webtest, python-flask, python2-flask) (python-flast-wtf, python2-flask-wtf) (python-flask-multistatic, python2-flask-multistatic) (python-cookies, python2-cookies) (python-responses, python2-responses) (python-geventhttpclient, python2-geventhttpclient) (python-requests-oauthlib, python2-requests-oauthlib) (python-url, python2-url, python-cachecontrol, python2-cachecontrol) (python-betamax, python2-betamax) (python-betamax-matchers, python2-betamax-matchers) (python-s3transfer, python2-s3transfer) (python-flask-restful, python-flask-basicauth) (python-flask-sqlalchemy, python-flask-restplus) (python-flask-restful-swagger, python-htmlmin, python2-htmlmin) (python-flask-htmlmin, python2-flask-htmlmin) (python-flask-login, python2-flask-login) (python-oauth2client, python-flask-oidc) (python-webassets, python-cssmin, python2-cssmin) (python-elasticsearch, python2-elasticsearch) (python-flask-script, python2-flask-script) (python-flask-migrate, python2-flask-migrate) (python-genshi, python2-genshi) (python-flask-principal, python2-flask-principal) (python-flask-httpauth, python2-flask-httpauth) (python-uritemplate, python2-uritemplate): Move to... * gnu/packages/python-web.scm: ... here. New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * gnu/packages/admin.scm, gnu/packages/backup.scm, gnu/packages/dav.scm, gnu/packages/django.scm, gnu/packages/docker.scm, gnu/packages/ebook.scm, gnu/packages/logging.scm, gnu/packages/mail.scm, gnu/packages/music.scm, gnu/packages/openstack.scm, gnu/packages/package-management.scm, gnu/packages/rdf.scm, gnu/packages/tls.scm, gnu/packages/tor.scm, gnu/packages/tryton.scm, gnu/packages/version-control.scm, gnu/packages/web-browsers.scm, gnu/packages/web.scm: Adjust accordingly. Ludovic Courtès
2017-09-24gnu: Fix syntax errors introduced by dc1d3cdef70f0e3c047c229c2a0e56....* gnu/packages/mp3.scm (libmad)[arguments]: Adjust syntax and indentation. * gnu/packages/rdf.scm (lrdf)[arguments]: Adjust phase order. * gnu/packages/audio.scm (vamp)[arguments]: Remove stray character. (zita-convolver)[arguments]: Adjust parsens and indentation. (clalsadrv)[arguments]: Remove stray 'modify-phases'. Marius Bakke
2017-09-20gnu: Use 'modify-phases' syntax....* gnu/packages/admin.scm (mingetty, clusterssh, wpa-supplicant-minimal, wpa-supplicant, wakelan, acpica, tree, direvent, dstat)[arguments]: Use 'modify-phases' syntax. * gnu/packages/algebra.scm (arb)[arguments]: Likewise. * gnu/packages/apr.scm (apr-util)[arguments]: Likewise. * gnu/packages/audio.scm (clalsadrv, fluidsynth, faad2, lv2-mda-piano, lv2-mda-epiano, timidity++, vamp, soundtouch, portaudio, rsound, zita-convolver, zita-alsa-pcmi)[arguments]: Likewise. * gnu/packages/backup.scm (rdup, btar)[arguments]: Likewise. * gnu/packages/bioinformatics.scm (bedops, bwa, crossmap, express, flexbar, grit, hisat, ngs-sdk, subread)[arguments]: Likewise. * gnu/packages/bittorrent.scm (transmission)[arguments]: Likewise. * gnu/packages/cdrom.scm (cd-discid)[arguments]: Likewise. * gnu/packages/compression.scm (sharutils)[arguments]: Likewise. * gnu/packages/conky.scm (conky)[arguments]: Likewise. * gnu/packages/databases.scm (bdb, bdb-5.3)[arguments]: Likewise. * gnu/packages/debug.scm (delta, c-reduce)[arguments]: Likewise. * gnu/packages/display-managers.scm (slim)[arguments]: Likewise. * gnu/packages/dns.scm (dnsmasq)[arguments]: Likewise. * gnu/packages/emacs.scm (geiser, emacs-wget, bbdb)[arguments]: Likewise. * gnu/packages/engineering.scm (pcb)[arguments]: Likewise. * gnu/packages/firmware.scm (ath9k-htc-firmware)[arguments]: Likewise. * gnu/packages/flashing-tools.scm (flashrom)[arguments]: Likewise. * gnu/packages/fltk.scm (fltk)[arguments]: Likewise. * gnu/packages/freedesktop.scm (python-pyxdg)[arguments]: Likewise. * gnu/packages/gd.scm (perl-gd)[arguments]: Likewise. * gnu/packages/gkrellm.scm (gkrellm)[arguments]: Likewise. * gnu/packages/glib.scm (glibmm)[arguments]: Likewise. * gnu/packages/gl.scm (glew)[arguments]: Likewise. * gnu/packages/gnome.scm (icon-naming-utils, orbit2, libbonobo, gnome-vfs, libgnome, libbonoboui, goffice-0.8, dconf)[arguments]: Likewise. * gnu/packages/gprolog.scm (gprolog)[arguments]: Likewise. * gnu/packages/gps.scm (gpscorrelate)[arguments]: Likewise. * gnu/packages/graphics.scm (agg)[arguments]: Likewise. * gnu/packages/gtk.scm (ganv, girara, gtksourceview-2, guile-present, python2-pycairo)[arguments]: Likewise. * gnu/packages/guile.scm (guile-1.8)[arguments]: Likewise. * gnu/packages/guile-wm.scm (guile-wm)[arguments]: Likewise. * gnu/packages/hugs.scm (hugs)[arguments]: Likewise. * gnu/packages/hurd.scm (gnumach-headers, hurd-headers, hurd-minimal) [arguments]: Likewise. * gnu/packages/image-viewers.scm (feh, sxiv)[arguments]: Likewise. * gnu/packages/libcanberra.scm (libcanberra)[arguments]: Likewise. * gnu/packages/linux.scm (bridge-utils, iw, fuse, unionfs-fuse/static, lm-sensors, i2c-tools, xsensors, perf, mdadm, libaio, module-init-tools) [arguments]: Likewise. * gnu/packages/lisp.scm (ccl)[arguments]: Likewise. * gnu/packages/lout.scm (lout)[arguments]: Likewise. * gnu/packages/lua.scm (luajit)[arguments]: Likewise. * gnu/packages/machine-learning.scm (shogun)[arguments]: Likewise. * gnu/packages/mail.scm (exim)[arguments]: Likewise. * gnu/packages/man.scm (man-pages, txt2man)[arguments]: Likewise. * gnu/packages/maths.scm (lapack, superlu-dist, openlibm, openspecfun) [arguments]: Likewise. * gnu/packages/messaging.scm (bitlbee)[arguments]: Likewise. * gnu/packages/mp3.scm (libmad, id3lib, mp3info)[arguments]: Likewise. * gnu/packages/music.scm (solfege)[arguments]: Likewise. * gnu/packages/noweb.scm (noweb)[arguments]: Likewise. * gnu/packages/patchutils.scm (patchutils, quilt, colordiff)[arguments]: Likewise. * gnu/packages/pdf.scm (xpdf, zathura-cb, zathura-ps, zathura-djvu, zathura-pdf-poppler, zathura, podofo, fbida)[arguments]: Likewise. * gnu/packages/perl.scm (perl-file-list, perl-test-harness)[arguments]: Likewise. * gnu/packages/photo.scm (gphoto2)[arguments]: Likewise. * gnu/packages/popt.scm (popt)[arguments]: Likewise. * gnu/packages/pretty-print.scm (source-highlight, astyle)[arguments]: Likewise. * gnu/packages/pumpio.scm (pumpa)[arguments]: Likewise. * gnu/packages/python.scm (python-passlib, python-pycrypto, python2-empy, python-sqlalchemy, python-docopt)[arguments]: Likewise. * gnu/packages/rdf.scm (lrdf)[arguments]: Likewise. * gnu/packages/regex.scm (tre)[arguments]: Likewise. * gnu/packages/rrdtool.scm (rrdtool)[arguments]: Likewise. * gnu/packages/ruby.scm (ruby-2.1, ruby-1.8)[arguments]: Likewise. * gnu/packages/sawfish.scm (sawfish)[arguments]: Likewise. * gnu/packages/scheme.scm (racket)[arguments]: Likewise. * gnu/packages/sdl.scm (guile-sdl)[arguments]: Likewise. * gnu/packages/serveez.scm (serveez)[arguments]: Likewise. * gnu/packages/skribilo.scm (skribilo)[arguments]: Likewise. * gnu/packages/smalltalk.scm (smalltalk)[arguments]: Likewise. * gnu/packages/suckless.scm (dmenu, slock)[arguments]: Likewise. * gnu/packages/tcl.scm (expect)[arguments]: Likewise. * gnu/packages/telephony.scm (commoncpp)[arguments]: Likewise. * gnu/packages/textutils.scm (recode, libgtextutils)[arguments]: Likewise. * gnu/packages/time.scm (time)[arguments]: Likewise. * gnu/packages/tor.scm (privoxy)[arguments]: Likewise. * gnu/packages/uucp.scm (uucp)[arguments]: Likewise. * gnu/packages/video.scm (libdvdnav-4)[arguments]: Likewise. * gnu/packages/web-browsers.scm (lynx)[arguments]: Likewise. * gnu/packages/web.scm (tinyproxy)[arguments]: Likewise. * gnu/packages/wicd.scm (wicd)[arguments]: Likewise. * gnu/packages/wm.scm (bspwm)[arguments]: Likewise. * gnu/packages/xdisorg.scm (sxhkd, xcape)[arguments]: Likewise. * gnu/packages/xfce.scm (xfconf)[arguments]: Likewise. * gnu/packages/xfig.scm (transfig)[arguments]: Likewise. * gnu/packages/xorg.scm (imake)[arguments]: Likewise. Kei Kebreau
2017-06-09gnu: raptor2: Fix heap overflow bug....* gnu/packages/patches/raptor2-heap-overflow.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/rdf.scm (raptor2): Use it. Marius Bakke
2017-04-10gnu: sord: Update to 0.16.0....* gnu/packages/rdf.scm (sord): Update to 0.16.0. Ricardo Wurmus
2017-04-10gnu: serd: Update to 0.26.0....* gnu/packages/rdf.scm (serd): Update to 0.26.0. Ricardo Wurmus
2016-12-14gnu: python-rdflib: Disable tests....* gnu/packages/rdf.scm (python-rdflib)[arguments]: Set #:tests? #f. [native-inputs]: Add python-nose. (python2-rdflib)[inputs]: Remove field. Use 'package-with-python2'. Marius Bakke
2016-11-15gnu: Fix python inputs, part 1: all inputs become propagated-inputs....This patch contains the changes where all [inputs] are changed to [propagated-inputs] * gnu/packages/python.scm (python-passlib, python-paramiko, python-ccm, python-babel, python-keyring python-pandas, python-tzlocal, python-parse-type, python-nose2, python-pytest, python-pytest-mock, python-pytest-xdist, python-scripttest, python-testtools, python-pytest-cov, python-testscenarios, python-pbr-0.11, python-oauthlib, python-jinja2, python-sphinx, python-tzlocal, python-bugz, python2-pytest-mock, behave, pelican, sqlalchemy-utils, python-pygridtools, python-urwidtrees, python-tornado, python2-tornado, python-debian, python-execnet, python-pytest-cache, pytest-localserver, python-clint, python-rply, python-hy, python-rauth, python-rsa, python-celery, python-vobject, s3cmd, python-prompt-toolkit, ptpython, python-requests-oauthlib, python-stem, python-binaryornot, python2-binaryornot, python-nltk, python-pymongo, python-schematics, python-url, python2-url, python-freezegun, python-glances, python-graphql-core, python-graphql-relay, python-graphene, python-nautilus, python-s3transfer): All [inputs] become [propagated-inputs]. * gnu/packages/bioinformatics.scm (python-biopython): Likewise. * gnu/packages/django.scm (pytest-django): Likewise. * gnu/packages/mail.scm (python-mailmanclient): Likewise. * gnu/packages/password-utils.scm (python-bcrypt): Likewise. * gnu/packages/propbuf.scm (python-protobuf): Likewise. * gnu/packages/rdf.scm (python-rdflib): Likewise. SQACH all become propagated Hartmut Goebel
2016-11-15gnu: Remove python-setuptools and python2-setuptools from inputs (part 2)...This patch contains the changes where removing setuptools from the inputs affected some code-lines beside. * gnu/packages/admin.scm (ansible): Remove all [inputs], [native-inputs] and [propagated-inputs] where python-setuptools or python2-setuptools are the sole entries. Remove python-setuptools and python2-setuptools listed on a line by its own from [inputs], [native-inputs] and [propagated-inputs]. * gnu/packages/backup.scm (duplicity): Likewise. * gnu/packages/bioinformatics.scm (bamm, python2-pybedtools, python2-bx-python, python2-dendropy, python-pysam, python2-pysam, clipper, crossmap, cutadapt, deeptools, grit, idr, python2-warpedlmm, pbtranscript-tofu, seqmagick): Likewise. * gnu/packages/docbook.scm (dblatex): Likewise. * gnu/packages/freedesktop.scm (python-pyxdg, python2-pyxdg): Likewise. * gnu/packages/lirc.scm (python2-lirc): Likewise. * gnu/packages/mp3.scm (eyed3): Likewise. * gnu/packages/nutrition.scm (gourmet): Likewise. * gnu/packages/openstack.scm (python-hacking, python2-hacking, python-os-testr, python2-os-testr, python-stevedore, python2-stevedore, python-tempest-lib, python2-tempest-lib, python-oslo.log, python2-oslo.log, python-keystoneclient, python2-keystoneclient): Likewise. * gnu/packages/password-utils.scm (assword): Likewise. * gnu/packages/python.scm (python-passlib, python2-passlib, python-babel, python2-babel, python-parse-type, python-pytest, python2-pytest, python-scripttest, python2-scripttest, python-testtools, python2-testtools, python-testscenarios, python2-testscenarios, python-subunit, python2-subunit, python-pbr-0.11, python-pbr, python2-pbr, python-testrepository, python2-testrepository, behave, python-wheel, python2-wheel, python-requests, python2-requests, python-jsonschema, python2-jsonschema, python-pyjwt, python2-pyjwt, python-virtualenv, python2-virtualenv, python-jinja2, python2-jinja2, python-joblib, python2-joblib, python-sphinx, python2-sphinx, python-feedgenerator, python2-feedgenerator, python-scikit-image, python2-scikit-image, python-redis, python2-redis, python2-fastlmm, python-numpydoc, python2-numpydoc, python-matplotlib, python2-matplotlib, python2-pysnptools, python-rpy2, python2-rpy2, python-pillow, python2-pillow, python-pycparser, python2-pycparser, python-cffi, python2-cffi, python-cairocffi, python2-cairocffi, python-drmaa, python2-drmaa, python-pathpy, python2-pathpy, python-simplegeneric, python2-simplegeneric, python-ipython, python2-ipython, python-apsw, python2-apsw, python-lxml, python2-lxml, python-networkx, python2-networkx, python-pyzmq, python2-pyzmq, python-mccabe, python2-mccabe, python-mccabe-0.2.1, python-flake8, python2-flake8, python-flake8-2.2.4, python-mistune, python2-mistune, python-ptyprocess, python2-ptyprocess, python-llfuse, python2-llfuse, python-webob, python2-webob, python-xlrd, python2-xlrd, python-tables, python2-tables, python-pip, python2-pip, python-libarchive-c, python2-libarchive-c, python-docopt, python2-docopt, python-pyrfc3339, python2-pyrfc3339, python-configobj, python2-configobj, python-clint, python2-clint, python-rply, python2-rply, python2-rpython, python-widgetsnbextension, python2-widgetsnbextension jupyter, python-jupyter-console, python2-jupyter-console, python-hy, python2-hy, python-urllib3, python2-urllib3, python-rsa, python2-rsa, python-tox, python2-tox, python2-hypothesis, python-paste, python2-paste, python-pastescript, python2-pastescript, python2-unicodecsv, python-pkgconfig, python2-pkgconfig, python2-rope, python-sqlparse, python2-sqlparse, python-gevent, python2-gevent, python-tabulate, python2-tabulate, python-arrow, python2-arrow, python-cleo, python2-cleo, python-fake-factory, python2-fake-factory, ptpython): Likewise. * gnu/packages/rdf.scm (python-rdflib, python2-rdflib): Likewise. * gnu/packages/terminals.scm (asciinema): Likewise. * gnu/packages/version-control.scm (git-annex-remote-hubic): Likewise. * gnu/packages/xdisorg.scm (arandr): Likewise. Hartmut Goebel
2016-08-14gnu: sord: Update to 0.14.0....* gnu/packages/rdf.scm (sord): Update to 0.14.0. Ricardo Wurmus
2016-08-14gnu: serd: Update to 0.22.0....* gnu/packages/rdf.scm (serd): Update to 0.22.0. Ricardo Wurmus
2016-05-12gnu: Update module imports for asciidoc and doxygen....This is a followup to commit 0573a923def01e54bf104e0015ade44ab42f694f. * gnu/packages/algebra.scm, gnu/packages/bioinformatics.scm, gnu/packages/fcitx.scm, gnu/packages/fish.scm, gnu/packages/freedesktop.scm, gnu/packages/game-development.scm, gnu/packages/gcc.scm, gnu/packages/graphics.scm, gnu/packages/image.scm, gnu/packages/kodi.scm, gnu/packages/libreoffice.scm, gnu/packages/linux.scm, gnu/packages/messaging.scm, gnu/packages/mpd.scm, gnu/packages/music.scm, gnu/packages/rdf.scm, gnu/packages/serialization.scm, gnu/packages/version-control.scm, gnu/packages/web.scm, gnu/packages/wm.scm, gnu/packages/xdisorg.scm, gnu/packages/xiph.scm: Change imports of (gnu packages asciidoc) or (gnu packages doxygen) to (gnu packages documentation). Mark H Weaver
2016-04-14gnu: packages: Use 'search-patches' everywhere....* gnu/packages/abiword.scm: Use 'search-patches' for 'patches' field. * gnu/packages/acl.scm: Likewise. * gnu/packages/admin.scm: Likewise. * gnu/packages/algebra.scm: Likewise. * gnu/packages/animation.scm: Likewise. * gnu/packages/apr.scm: Likewise. * gnu/packages/audacity.scm: Likewise. * gnu/packages/audio.scm: Likewise. * gnu/packages/autotools.scm: Likewise. * gnu/packages/avahi.scm: Likewise. * gnu/packages/backup.scm: Likewise. * gnu/packages/base.scm: Likewise. * gnu/packages/bash.scm: Likewise. * gnu/packages/bioinformatics.scm: Likewise. * gnu/packages/cdrom.scm: Likewise. * gnu/packages/ci.scm: Likewise. * gnu/packages/cmake.scm: Likewise. * gnu/packages/cpio.scm: Likewise. * gnu/packages/cross-base.scm: Likewise. * gnu/packages/dico.scm: Likewise. * gnu/packages/doxygen.scm: Likewise. * gnu/packages/ebook.scm: Likewise. * gnu/packages/elf.scm: Likewise. * gnu/packages/emacs.scm: Likewise. * gnu/packages/engineering.scm: Likewise. * gnu/packages/firmware.scm: Likewise. * gnu/packages/flashing-tools.scm: Likewise. * gnu/packages/fltk.scm: Likewise. * gnu/packages/ftp.scm: Likewise. * gnu/packages/games.scm: Likewise. * gnu/packages/gawk.scm: Likewise. * gnu/packages/gcc.scm: Likewise. * gnu/packages/gd.scm: Likewise. * gnu/packages/ghostscript.scm: Likewise. * gnu/packages/glib.scm: Likewise. * gnu/packages/gnome.scm: Likewise. * gnu/packages/gnucash.scm: Likewise. * gnu/packages/gnunet.scm: Likewise. * gnu/packages/gnupg.scm: Likewise. * gnu/packages/gnuzilla.scm: Likewise. * gnu/packages/graphics.scm: Likewise. * gnu/packages/grub.scm: Likewise. * gnu/packages/gtk.scm: Likewise. * gnu/packages/guile.scm: Likewise. * gnu/packages/icu4c.scm: Likewise. * gnu/packages/idutils.scm: Likewise. * gnu/packages/image.scm: Likewise. * gnu/packages/imagemagick.scm: Likewise. * gnu/packages/irc.scm: Likewise. * gnu/packages/ldc.scm: Likewise. * gnu/packages/libcanberra.scm: Likewise. * gnu/packages/libevent.scm: Likewise. * gnu/packages/libreoffice.scm: Likewise. * gnu/packages/libunwind.scm: Likewise. * gnu/packages/libusb.scm: Likewise. * gnu/packages/linux.scm: Likewise. * gnu/packages/lirc.scm: Likewise. * gnu/packages/llvm.scm: Likewise. * gnu/packages/lsh.scm: Likewise. * gnu/packages/lua.scm: Likewise. * gnu/packages/lxqt.scm: Likewise. * gnu/packages/mail.scm: Likewise. * gnu/packages/maths.scm: Likewise. * gnu/packages/mcrypt.scm: Likewise. * gnu/packages/messaging.scm: Likewise. * gnu/packages/mit-krb5.scm: Likewise. * gnu/packages/mp3.scm: Likewise. * gnu/packages/multiprecision.scm: Likewise. * gnu/packages/music.scm: Likewise. * gnu/packages/ninja.scm: Likewise. * gnu/packages/nvi.scm: Likewise. * gnu/packages/ocaml.scm: Likewise. * gnu/packages/orpheus.scm: Likewise. * gnu/packages/ots.scm: Likewise. * gnu/packages/parallel.scm: Likewise. * gnu/packages/patchutils.scm: Likewise. * gnu/packages/pcre.scm: Likewise. * gnu/packages/pdf.scm: Likewise. * gnu/packages/perl.scm: Likewise. * gnu/packages/plotutils.scm: Likewise. * gnu/packages/polkit.scm: Likewise. * gnu/packages/pulseaudio.scm: Likewise. * gnu/packages/python.scm: Likewise. * gnu/packages/qemu.scm: Likewise. * gnu/packages/qt.scm: Likewise. * gnu/packages/ratpoison.scm: Likewise. * gnu/packages/rdf.scm: Likewise. * gnu/packages/readline.scm: Likewise. * gnu/packages/rush.scm: Likewise. * gnu/packages/scheme.scm: Likewise. * gnu/packages/screen.scm: Likewise. * gnu/packages/sdl.scm: Likewise. * gnu/packages/slim.scm: Likewise. * gnu/packages/ssh.scm: Likewise. * gnu/packages/tcl.scm: Likewise. * gnu/packages/tcsh.scm: Likewise. * gnu/packages/texinfo.scm: Likewise. * gnu/packages/tls.scm: Likewise. * gnu/packages/tor.scm: Likewise. * gnu/packages/tv.scm: Likewise. * gnu/packages/valgrind.scm: Likewise. * gnu/packages/version-control.scm: Likewise. * gnu/packages/video.scm: Likewise. * gnu/packages/vpn.scm: Likewise. * gnu/packages/vtk.scm: Likewise. * gnu/packages/w3m.scm: Likewise. * gnu/packages/web.scm: Likewise. * gnu/packages/wicd.scm: Likewise. * gnu/packages/wm.scm: Likewise. * gnu/packages/xdisorg.scm: Likewise. * gnu/packages/xfce.scm: Likewise. * gnu/packages/xiph.scm: Likewise. * gnu/packages/xml.scm: Likewise. * gnu/packages/xorg.scm: Likewise. * gnu/packages/zip.scm: Likewise. Alex Kost
2016-02-22gnu: Remove KDE 4....* gnu/packages/kde.scm (qjson): Move from here... * gnu/packages/qt.scm (qjson): ...to here. * gnu/packages/pumpio.scm: Drop inclusion of (gnu packages kde). * gnu/packages/kde.scm: Delete file. * gnu-system.am (GNU_SYSTEM_MODULES): Unregister it. * gnu/packages/rdf.scm (soprano): Delete variable. KDE 4 relies on Qt 4, which does not receive security updates any more. Andreas Enge
2015-07-18gnu packages: Clean up synopses and descriptions....* gnu/packages/admin.scm, gnu/packages/algebra.scm, gnu/packages/audio.scm, gnu/packages/backup.scm, gnu/packages/base.scm, gnu/packages/bittorrent.scm, gnu/packages/code.scm, gnu/packages/compression.scm, gnu/packages/databases.scm, gnu/packages/enchant.scm, gnu/packages/firmware.scm, gnu/packages/fonts.scm, gnu/packages/freedesktop.scm, gnu/packages/games.scm, gnu/packages/gd.scm, gnu/packages/gl.scm, gnu/packages/gnome.scm, gnu/packages/gsasl.scm, gnu/packages/gstreamer.scm, gnu/packages/gtk.scm, gnu/packages/guile.scm, gnu/packages/haskell.scm, gnu/packages/language.scm, gnu/packages/lesstif.scm, gnu/packages/libreoffice.scm, gnu/packages/linux.scm, gnu/packages/llvm.scm, gnu/packages/maths.scm, gnu/packages/mcrypt.scm, gnu/packages/mit-krb5.scm, gnu/packages/mp3.scm, gnu/packages/ncdu.scm, gnu/packages/networking.scm, gnu/packages/ntp.scm, gnu/packages/ocaml.scm, gnu/packages/openbox.scm, gnu/packages/pdf.scm, gnu/packages/perl.scm, gnu/packages/pretty-print.scm, gnu/packages/pulseaudio.scm, gnu/packages/python.scm, gnu/packages/rdesktop.scm, gnu/packages/rdf.scm, gnu/packages/ruby.scm, gnu/packages/slang.scm, gnu/packages/slim.scm, gnu/packages/telephony.scm, gnu/packages/tls.scm, gnu/packages/tmux.scm, gnu/packages/tre.scm, gnu/packages/unrtf.scm, gnu/packages/version-control.scm, gnu/packages/vpn.scm, gnu/packages/web.scm, gnu/packages/wget.scm, gnu/packages/xdisorg.scm, gnu/packages/xfce.scm, gnu/packages/xiph.scm: Fix typos. Trim long lines. Add missing periods in the end of sentences. Use double spaces between sentences. Remove trailing whitespaces. Alex Kost
2015-07-05gnu: Move content of openssl module into tls module....* gnu/packages/openssl.scm (openssl, perl-net-ssleay): Move to... * gnu/packages/tls.scm: ...here. * gnu/packages/openssl.scm: Delete file. * gnu-system.am (GNU_SYSTEM_MODULES): Unregister deleted file. * gnu/packages/{admin.scm, bittorrent.scm, certs.scm, ci.scm, cyrus-sasl.scm, databases.scm, dns.scm, ebook.scm, enlightenment.scm, gnunet.scm, libreoffice.scm, links.scm, mail.scm, messaging.scm, networking.scm, ntp.scm, openldap.scm, package-management.scm, pdf.scm, python.scm, qt.scm, rdesktop.scm, rdf.scm, ruby.scm, ssh.scm, synergy.scm, tor.scm, version-control.scm, video.scm, vpn.scm, w3m.scm, web.scm, weechat.scm, xiph.scm}: Adapt module import. Andreas Enge
2015-05-17gnu: redland: Propagate input....* gnu/packages/rdf.scm (redland): Move rasqal from 'inputs' to 'propagated-inputs'. * gnu/packages/rdf.scm (soprano): Drop input rasqal. * gnu/packages/audio.scm (ardour-3): Drop inputs rasqal and raptor2. Reported by John Darrington <jmd@gnu.org>. Andreas Enge
2015-04-30gnu: sord: Set rpath via LDFLAGS....Fixes <http://bugs.gnu.org/20044>. * gnu/packages/rdf.scm (sord): Add a pre-configure phase setting $LDFLAGS to set the rpath to $out/lib. Taylan Ulrich Bayırlı/Kammer
2015-04-30gnu: serd: Set rpath via LDFLAGS....Fixes <http://bugs.gnu.org/20051>. * gnu/packages/rdf.scm (serd): Add a pre-configure phase setting $LDFLAGS to set the rpath to $out/lib. Taylan Ulrich Bayırlı/Kammer
2015-03-14gnu: Update packages to use 'non-copyleft' instead of 'bsd-style'....* gnu/packages/avr.scm, gnu/packages/compression.scm, gnu/packages/curl.scm, gnu/packages/cyrus-sasl.scm, gnu/packages/databases.scm, gnu/packages/firmware.scm, gnu/packages/flex.scm, gnu/packages/fontutils.scm, gnu/packages/gd.scm, gnu/packages/ghostscript.scm, gnu/packages/gnunet.scm, gnu/packages/graphics.scm, gnu/packages/hugs.scm, gnu/packages/image.scm, gnu/packages/linux.scm, gnu/packages/mail.scm, gnu/packages/maths.scm, gnu/packages/mit-krb5.scm, gnu/packages/python.scm, gnu/packages/rdf.scm, gnu/packages/ssh.scm, gnu/packages/tcl.scm, gnu/packages/xdisorg.scm, gnu/packages/xiph.scm, gnu/packages/yasm.scm, gnu/packages/zip.scm: Use 'non-copyleft' instead of 'bsd-style'. Ludovic Courtès
2015-03-07gnu: lrdf: Fix phases....Fixes a regression caused by 722ec722441a755e18fbc696d23441427dfb26af. * gnu/packages/rdf.scm (lrdf)[arguments]: Swap order of 'alist-cons-after' calls. Mark H Weaver
2015-02-28gnu: Add 'file-name' fields for github source tarballs without a name....* gnu/packages/aarddict.scm (aarddict), gnu/packages/algebra.scm (arb), gnu/packages/audio.scm (jack-2, lvtk), gnu/packages/bioinformatics.scm (bedops, bedtools, bowtie), gnu/packages/game-development.scm (tiled), gnu/packages/games.scm (minetest-data, minetest, retroarch), gnu/packages/jrnl.scm (jrnl), gnu/packages/kde.scm (qjson), gnu/packages/libevent.scm (libuv), gnu/packages/linux.scm (pflask), gnu/packages/mail.scm (offlineimap, libetpan), gnu/packages/maths.scm (arpack-ng), gnu/packages/ninja.scm (ninja), gnu/packages/nutrition.scm (gourmet), gnu/packages/python.scm (python-cairocffi), gnu/packages/rdf.scm (lrdf), gnu/packages/ruby.scm (ruby-i18n), gnu/packages/sxiv.scm (sxiv): Add 'file-name' field to origin. Mark H Weaver
2015-02-28gnu: Move autoconf-style phases after the unpack phase....* gnu/packages/audio.scm (soundtouch)[arguments]: Move 'bootstrap' after 'unpack'. Remove custom /usr/bin/file patching, which will now be handled by the 'patch-usr-bin-file' phase. * gnu/packages/emacs.scm (emacs-w3m)[arguments]: Rename 'pre-configure' phase to 'autoconf' and move it after 'unpack'. * gnu/packages/fontutils.scm (libuninameslist)[arguments]: Move 'bootstrap' phase after 'unpack'. * gnu/packages/libevent.scm (libuv)[arguments]: Move 'autogen' phase after 'unpack'. Run "sh autogen.sh" instead of "./autogen.sh". * gnu/packages/linux.scm (bridge-utils)[arguments]: Move 'bootstrap' phase after 'unpack'. * gnu/packages/mail.scm (libetpan)[arguments]: Move 'autogen' phase after 'unpack'. Run "sh autogen.sh" instead of "./autogen.sh". Setenv "NOCONFIGURE" before running autogen.sh. * gnu/packages/package-management.scm (guix-devel)[arguments]: Move 'bootstrap' phase after 'unpack'. Run "sh autogen.sh" instead of "./autogen.sh". * gnu/packages/rdf.scm (lrdf)[arguments]: Move 'autoreconf' phase after 'remove-out-of-tree-references' phase. * gnu/packages/tor.scm (privoxy)[arguments]: Move 'autoconf' phase after 'unpack'. * gnu/packages/web.scm (libpsl)[arguments]: Move 'bootstrap' phase after 'unpack'. Run "sh autogen.sh" instead of "./autogen.sh". Remove 'fix-autogen-shebang' phase. Mark H Weaver
2015-02-25gnu: python2-rdflib: Explicitly build with python-2....* gnu/packages/rdf.scm (python2-rdflib): Add argument to build with python-2. Andreas Enge
2015-02-25gnu: Add python2-rdflib....* gnu/packages/rdf.scm (python2-rdflib): New variable. (python-rdflib): Add patch. * gnu/packages/patches/python2-rdflib-drop-sparqlwrapper.patch: New file. * gnu-system.am (dist_patch_DATA): Register patch. Andreas Enge
2015-02-25gnu: python-rdflib: Correct typo....* gnu/packages/rdf.scm (python-rdflib): Correct typo in the name of an input. Andreas Enge
2015-02-11gnu: Add sord....* gnu/packages/rdf.scm (sord): New variable. Ricardo Wurmus
2015-02-11gnu: Add serd....* gnu/packages/rdf.scm (serd): New variable. Ricardo Wurmus
2015-01-27gnu: Add LRDF....* gnu/packages/rdf.scm (lrdf): New variable. rekado
2015-01-20gnu: Add python-rdflib....* gnu/packages/rdf.scm (python-rdflib): New variable. Andreas Enge
2015-01-17gnu: rasqal: Update to 0.9.33....* gnu/packages/rdf.scm (rasqal): Update to 0.9.33. Andreas Enge
2015-01-17gnu: raptor2: Update to 2.0.15....* gnu/packages/rdf.scm (raptor2): Update to 2.0.15. Andreas Enge
2014-10-06gnu: clucene: Enable the contrib-libs....* gnu/packages/rdf.scm (clucene): Enable the contribs-lib directory. John Darrington
2014-09-08gnu: Consolidate databases in (gnu packages databases)....* gnu/packages/databases.scm: New file, with the contents of the following deleted files. * gnu/packages/mysql.scm, gnu/packages/postgresql.scm, gnu/packages/recutils.scm, gnu/packages/sqlite.scm, gnu/packages/bdb.scm: Remove. * gnu-system.am (GNU_SYSTEM_MODULES): Adjust accordingly. * gnu/packages/apl.scm, gnu/packages/dc.scm, gnu/packages/games.scm, gnu/packages/gnunet.scm, gnu/packages/linux.scm, gnu/packages/mail.scm, gnu/packages/mpd.scm, gnu/packages/nvi.scm, gnu/packages/openldap.scm, gnu/packages/package-management.scm, gnu/packages/python.scm, gnu/packages/qt.scm, gnu/packages/rdf.scm, gnu/packages/version-control.scm: Adjust to new module name. Ludovic Courtès
2014-05-17gnu: soprano: Add input redland....* gnu/packages/rdf.scm (soprano): Add inputs redland and rasqal, drop raptor2 (propagated by rasqal). Andreas Enge
2014-05-17gnu: Add redland....* gnu/packages/rdf.scm (redland): New variable. Andreas Enge