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2015-08-17gnu: r: Add R_LIBS_SITE to native-search-paths....* gnu/packages/statistics.scm (r)[native-search-paths]: Add specification for "R_LIBS_SITE" variable. Ricardo Wurmus
2015-08-17gnu: r: Update to 3.2.2....* gnu/packages/statistics.scm (r): Update to 3.2.2. Ricardo Wurmus
2015-07-03gnu: r: Replace "atlas" with "openblas"....* gnu/packages/statistics.scm (r)[inputs]: Replace "atlas" with "openblas". Ricardo Wurmus
2015-07-02gnu: r: Set default pager....* gnu/packages/statistics.scm (r)[arguments]: Add phase "set-default-pager" to avoid "false" as a default pager. Ricardo Wurmus
2015-06-29gnu: r: Update to 3.2.1....* gnu/packages/statistics.scm (r): Update to 3.2.1. * gnu/packages/patches/r-fix-15899.patch: Remove file. * gnu-system.am (dist_patch_DATA): Remove it. Ricardo Wurmus
2015-06-25gnu: Replace versioned gfortran inputs with just "gfortran"....* gnu/packages/julia.scm (julia)[inputs]: Replace "gfortran-4.8" with "gfortran". * gnu/packages/machine-learning.scm (randomjungle)[native-inputs]: Likewise. * gnu/packages/maths.scm (arpack-ng, lapack, petsc, superlu) (superlu-dist, openblas, openspecfun, atlas)[inputs]: Likewise. (octave)[native-inputs]: Likewise. (gmsh)[propagated-inputs]: Likewise. * gnu/packages/mpi.scm (openmpi)[inputs]: Likewise. * gnu/packages/python.scm (python-numpy-bootstrap)[native-inputs]: Likewise. * gnu/packages/python.scm (python-scipy)[native-inputs]: Likewise. * gnu/packages/statistics.scm (r)[inputs]: Replace "gfortran-4.9" with "gfortran". Ricardo Wurmus
2015-06-24gnu: r: Use gfortran-4.9....* gnu/packages/statistics.scm (r)[inputs]: Replace gfortran-4.8 with gfortran-4.9. Ricardo Wurmus
2015-05-21gnu: r: Apply patch to fix linking against R....* gnu/packages/patches/r-fix-15899.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/statistics.scm (r)[source]: Use it. Ricardo Wurmus
2015-04-23gnu: r: Update to 3.2.0....* gnu/packages/statistics.scm (r): Update to 3.2.0. Ricardo Wurmus
2015-04-23gnu: r: Set library rpath....* gnu/packages/statistics.scm (r)[arguments]: Add the rpath for lib directory of output to LDFLAGS. Ricardo Wurmus
2015-03-04gnu: Move 'which' to (gnu packages base)....* gnu/packages/which.scm: Remove. * gnu-system.am (GNU_SYSTEM_MODULES): Remove it. * gnu/packages/base.scm (which): New variable. * gnu/packages/aspell.scm, gnu/packages/audio.scm, gnu/packages/autogen.scm, gnu/packages/cdrom.scm, gnu/packages/compression.scm, gnu/packages/datamash.scm, gnu/packages/games.scm, gnu/packages/glib.scm, gnu/packages/gnu-pw-mgr.scm, gnu/packages/gnutls.scm, gnu/packages/gps.scm, gnu/packages/guile.scm, gnu/packages/java.scm, gnu/packages/libevent.scm, gnu/packages/linux.scm, gnu/packages/lisp.scm, gnu/packages/node.scm, gnu/packages/ntp.scm, gnu/packages/orpheus.scm, gnu/packages/pciutils.scm, gnu/packages/python.scm, gnu/packages/qt.scm, gnu/packages/rsync.scm, gnu/packages/sawfish.scm, gnu/packages/scheme.scm, gnu/packages/ssh.scm, gnu/packages/statistics.scm, gnu/packages/texlive.scm, gnu/packages/wdiff.scm: Adjust accordingly. Ludovic Courtès
2015-03-04gnu: icedtea6: split outputs....* gnu/packages/java.scm (icedtea6)[outputs]: Use separate outputs for documentation ("doc"), JDK ("jdk"), and JRE ("out"). * gnu/packages/java.scm (ant)[native-inputs]: Reference "jdk" output of icedtea6 package. * gnu/packages/statistics.scm (r)[inputs]: Reference "jdk" output of icedtea6 package. Ricardo Wurmus
2015-02-16gnu: Add R....* gnu/packages/statistics.scm: New file. * gnu-system.am (GNU_SYSTEM_MODULES): Add it * guix/download.scm (%mirrors): Add CRAN mirrors. Ricardo Wurmus