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2022-05-02gnu: apl: Update to 1.8-r1550....This commit fixes a failing build caused by -Werror (the configure script no longer sets the -Werror compilation flag). * gnu/packages/apl.scm (apl): Update to 1.8-r1550. [arguments]: Add 'fix-configure' phase. [license]: Prefix with 'license:'. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Paul A. Patience
2022-05-02gnu: Add emacs-git-email....* gnu/packages/emacs-xyz.scm (emacs-git-email): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Niklas Eklund
2022-05-02gnu: ugrep: Update to 3.7.9....* gnu/packages/search.scm (ugrep): Update to 3.7.9. Signed-off-by: Ludovic Courtès <ludo@gnu.org> kiasoc5
2022-05-02gnu: aws-sdk-cpp: Remove openssl input....* gnu/packages/cpp.scm (aws-sdk-cpp): [inputs]: Remove openssl. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2022-05-02gnu: s2n: Link to aws-lc as libcrypto dependency....* gnu/packages/tls.scm (s2n): [arguments]: Fix for openssl as replacement input for aws-lc. [propagated-inputs]: Add aws-lc and remove openssl. [supported-systems]: Only support x86_64-linux. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2022-05-02gnu: aws-lc: Fix checksum and enable tests....* gnu/packages/tls.scm (aws-lc): [source]: Fix checksum. [arguments]: Enable tests. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2022-05-02gnu: aws-crt-cpp: Fix comment formatting....* gnu/packages/cpp.scm (aws-crt-cpp): Fix comment formatting. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2022-05-02gnu: aws-c-mqtt: Fix comment formatting....* gnu/packages/c.scm (aws-c-mqtt): Fix comment formatting. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2022-05-02gnu: aws-c-s3: Fix comment formatting....* gnu/packages/c.scm (aws-c-s3): Fix comment formatting. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2022-05-02gnu: aws-c-auth: Fix comment formatting....* gnu/packages/c.scm (aws-c-auth): Fix comment formatting. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2022-05-02gnu: aws-c-compression: Fix comment formatting....* gnu/packages/c.scm (aws-c-compression): Fix comment formatting. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2022-05-02gnu: aws-c-http: Fix comment formatting....* gnu/packages/c.scm (aws-c-http): Fix comment formatting. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2022-05-02gnu: aws-c-sdkutils: Fix comment formatting....* gnu/packages/c.scm (aws-c-sdkutils): Fix comment formatting. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2022-05-02gnu: aws-c-cal: Fix comment formatting....* gnu/packages/c.scm (aws-c-cal): Fix comment formatting. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2022-05-02gnu: aws-c-io: Fix comment formatting....* gnu/packages/c.scm (aws-c-io): Fix comment formatting. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2022-05-02gnu: aws-c-event-stream: Fix comment formatting....* gnu/packages/c.scm (aws-c-event-stream): Fix comment formatting. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2022-05-02gnu: aws-checksums: Fix comment formatting....* gnu/packages/c.scm (aws-checksums): Fix comment formatting. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2022-05-02gnu: aws-c-common: Only support i686 and x86_64....* gnu/packages/c.scm (aws-c-common): [supported-systems]: Only support i686-linux and x86_64-linux. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2022-05-02gnu: htslib-for-stringtie: Inherit from htslib-1.12....* gnu/packages/bioinformatics.scm (htslib-for-stringtie): Inherit from htslib-1.12. Ricardo Wurmus
2022-05-02gnu: Remove python-xlrd-1....* gnu/packages/python-xyz.scm (python-xlrd-1): Remove variable. Ricardo Wurmus
2022-05-02gnu: Remove python-cytoolz-for-cooler....* gnu/packages/python-xyz.scm (python-cytoolz-for-cooler): Remove variable. Ricardo Wurmus
2022-05-02gnu: python-cooler: Use more recent cytoolz....* gnu/packages/bioinformatics.scm (python-cooler)[propagated-inputs]: Replace python-cytoolz-for-cooler with python-cytoolz. Ricardo Wurmus
2022-05-02gnu: python-anndata: Remove python-xlrd-1....* gnu/packages/python-xyz.scm (python-anndata)[propagated-inputs]: Remove python-xlrd-1. Ricardo Wurmus
2022-05-01gnu: ungoogled-chromium: Update to 101.0.4951.41-1....* gnu/packages/chromium.scm (%preserved-third-party-files): Include bundled Vulkan headers. (%chromium-version): Set to 101.0.4951.41. (%debian-revision): Set to debian/101.0.4951.41-2. (%debian-patches): Add one new patch. (%ungoogled-origin, ungoogled-chromium): Update hashes. * gnu/packages/patches/ungoogled-chromium-system-nspr.patch: Refresh. Marius Bakke
2022-05-01gnu: ocaml-uuidm: Update to 0.9.8....* gnu/packages/ocaml.scm (ocaml-uuidm): Update to 0.9.8. (ocaml4.07-uuidm): New variable. Julien Lepiller
2022-05-01gnu: ocamlformat: Update to 0.21.0....* gnu/packages/ocaml.scm (ocamlformat): Update to 0.21.0. Julien Lepiller
2022-05-01gnu: ocaml-cmdliner: Update to 1.1.0....Cmdliner changed its output format, so two packages need to be modified to accept the new format. The patch modifies ocaml 4.07 packages to ensure this patch results in the same derivations for these variants. * gnu/packages/ocaml.scm (ocaml-cmdliner): Update to 1.1.0. (ocaml-alcotest, ocaml-mdx)[arguments]: Fix tests. (ocaml4.07-cmdliner): New variable. (ocaml4.07-alcotest): Do not fix tests. Julien Lepiller
2022-05-01gnu: ocaml-re: Update to 1.10.4....* gnu/packages/ocaml.scm (ocaml-re): Update to 1.10.4. Julien Lepiller
2022-05-01gnu: ocaml-spawn: Update to 0.15.1....* gnu/packages/ocaml.scm (ocaml-spawn): Update to 0.15.1. Julien Lepiller
2022-05-01gnu: ocaml-ppx-fields-conv: Update to 0.15.0....* gnu/packages/ocaml.scm (ocaml-ppx-fields-conv): Update to 0.15.0. Julien Lepiller
2022-05-01gnu: ocaml-parsexp: Update to 0.15.0....* gnu/packages/ocaml.scm (ocaml-parsexp): Update to 0.15.0. Julien Lepiller
2022-05-01gnu: ocaml-ppx-hash: Update to 0.15.0....* gnu/packages/ocaml.scm (ocaml-ppx-hash): Update to 0.15.0. Julien Lepiller
2022-05-01gnu: ocaml-ppx-sexp-value: Update to 0.15.0....* gnu/packages/ocaml.scm (ocaml-ppx-sexp-value): Update to 0.15.0. Julien Lepiller
2022-05-01gnu: ocaml-jst-config: Update to 0.15.1....* gnu/packages/ocaml.scm (ocaml-jst-config): Update to 0.15.1. Julien Lepiller
2022-05-01gnu: ocaml-ppx-stable: Update to 0.15.0....* gnu/packages/ocaml.scm (ocaml-ppx-stable): Update to 0.15.0. Julien Lepiller
2022-05-01gnu: ocaml-ppx-base: Update to 0.15.0....* gnu/packages/ocaml.scm (ocaml-ppx-base): Update to 0.15.0. Julien Lepiller
2022-05-01gnu: ocaml-ppx-compare: Update to 0.15.0....* gnu/packages/ocaml.scm (ocaml-ppx-compare): Update to 0.15.0. Julien Lepiller
2022-05-01gnu: ocaml-jane-street-headers: Update to 0.15.0....* gnu/packages/ocaml.scm (ocaml-jane-street-headers): Update to 0.15.0. Julien Lepiller
2022-05-01gnu: ocaml-base-bigstring: Update to 0.15.0....* gnu/packages/ocaml.scm (ocaml-base-bigstring): Update to 0.15.0. Julien Lepiller
2022-05-01gnu: ocaml-core: Update to 0.15.0....These packages cannot be updated individually. * gnu/packages/ocaml.scm (ocaml-ppx-inline-test, ocaml-sexplib0) (ocaml-sexplib, ocaml-base, ocaml-stdio, ocaml-ppx-sexp-conv) (ocaml-ppx-expect, ocaml-base-quickcheck, ocaml-core) (ocaml-core-kernel, ocaml-timezone): Update to 0.15.0. (ocaml-ppxlib): Fix tests. (ocaml-int-repr): New variable. Julien Lepiller
2022-05-01gnu: ocaml-ppxlib: Update to 0.25.0....* gnu/packages/ocaml.scm (ocaml-ppxlib): Update to 0.25.0. Julien Lepiller
2022-05-01gnu: coq: Update to 8.15.1....* gnu/packages/coq.scm (coq): Update to 8.15.1. Julien Lepiller
2022-05-01gnu: ocaml-hex: Update to 1.5.0....* gnu/packages/ocaml.scm (ocaml-hex): Update to 1.5.0. Julien Lepiller
2022-05-01gnu: ocaml-easy-format: Update to 1.3.3....* gnu/packages/ocaml.scm (ocaml-easy-format): Update to 1.3.3. Julien Lepiller
2022-05-01gnu: ocaml-variantslib: Update to 0.15.0....* gnu/packages/ocaml.scm (ocaml-variantslib): Update to 0.15.0. Julien Lepiller
2022-05-01gnu: ocaml-ppx-optcomp: Update to 0.15.0....* gnu/packages/ocaml.scm (ocaml-ppx-optcomp): Update to 0.15.0. Julien Lepiller
2022-05-01gnu: ocaml-cstruct: Update to 6.1.0....* gnu/packages/ocaml.scm (ocaml-cstruct): Update to 6.1.0. Julien Lepiller
2022-05-01gnu: ocaml-ppx-bin-prot: Update to 0.15.0....* gnu/packages/ocaml.scm (ocaml-ppx-bin-prot): Update to 0.15.0. Julien Lepiller
2022-05-01gnu: ocaml-ppx-jane: Update to 0.15.0....* gnu/packages/ocaml.scm (ocaml-ppx-jane): Update to 0.15.0. Julien Lepiller
2022-05-01gnu: Add ocaml-ppx-disable-unused-warnings....* gnu/packages/ocaml.scm (ocaml-ppx-disable-unused-warnings): New variable. Julien Lepiller