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2022-06-01gnu: libstrophe: Update to 0.12.0....* gnu/packages/messaging.scm (libstrophe): Update to 0.12.0. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Jack Hill
2022-06-01gnu: emacs-doom-themes: Include extension files....Newer versions of `emacs-doom-themes' separated extension support into a separate directory, so this change includes those files. * gnu/packages/emacs-xyz.scm (emacs-doom-themes)[arguments]: Consider extensions/*.el files. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Dominic Martinez
2022-06-01gnu: public-inbox: Update to 1.8.0....Some fixes are needed in both the testsuite and the package itself before tests can pass so disable them for now. Also, the lei command needs curl to work, so add it to the PATH in ‘wrap-program’. * gnu/packages/mail.scm (public-inbox)[version]: Change to 1.8.0. [source]: Update hash. [arguments]<#:tests?>: Set to #f. [arguments]<#:phases>{wrap-programs}: Add curl to PATH. [inputs]: Add curl and perl-socket-msghdr. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Thiago Jung Bauermann
2022-06-01gnu: Add perl-socket-msghdr...* gnu/packages/perl.scm (perl-socket-msghdr): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Thiago Jung Bauermann
2022-06-01gnu: public-inbox: Some packaging fixes...The file ‘script/public-inbox-compact’ doesn't call ‘xapian-compact’ directly anymore, so the substitution in the ‘qualify-paths’ phase doesn't do anything. Now there's a reference to ‘xapian-compact’ in ‘lib/PublicInbox/Xapcmd.pm’, so substitute the path there. And move xapian from native-inputs to inputs and use its input path in the substitution, since ‘xapian-compact’ is called during normal execution of public-inbox. Also add ‘bash-minimal’ to the package's inputs, since it uses ‘wrap-program’. Finally, take the opportunity to change build phases to not return #t unconditionally, since that isn't necessary anymore. * gnu/packages/mail.scm (public-inbox)[arguments]<#:phases>: Don't return #t from each phase. {qualify-paths}: Substitute ‘xapian-compact’ path in the correct file. Use ‘search-input-file’ rather than ‘which’ to find it. [native-inputs]: Move ‘xapian’ from here ... [inputs]: ... to here. Add ‘bash-minimal’. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Thiago Jung Bauermann
2022-06-01gnu: Add emacs-bfuture....* gnu/packages/emacs-xyz.scm (emacs-bfuture): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Fredrik Salomonsson
2022-06-01gnu: Remove unreferenced patch....This is a follow-up to a08c21f206d34a42d311e46b495b422188be70eb. * gnu/packages/patches/libmicrohttpd-0.9.73-test-ssl3.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. Efraim Flashner
2022-06-01gnu: LLVM, Clang, LLD: Update to 14.0.4....* gnu/packages/llvm.scm (%llvm-monorepo-hashes): Adjust for 14.0.4. (%llvm-patches): Likewise. (llvm-14, clang-14, lld-14): Update to 14.0.4. * gnu/packages/patches/clang-14.0-libc-search-path.patch: Adjust for upstream changes. Marius Bakke
2022-05-29gnu: libmicrohttpd: Update to 0.9.75....* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.75. Tobias Geerinckx-Rice
2022-05-29gnu: libmicrohttpd: Use G-expressions....* gnu/packages/gnunet.scm (libmicrohttpd)[arguments]: Rewrite as G-expressions. Tobias Geerinckx-Rice
2022-05-29gnu: pgpdump: Update to 0.35....* gnu/packages/gnupg.scm (pgpdump): Update to 0.35. Tobias Geerinckx-Rice
2022-05-29gnu: ocrfeeder: Update to 0.8.5....* gnu/packages/gnome.scm (ocrfeeder): Update to 0.8.5. [arguments]: Don't explicitly return #t from phases. Tobias Geerinckx-Rice
2022-06-01gnu: icedove: Use updated clang and llvm....* gnu/packages/gnuzilla.scm (icedove)[native-inputs]: Replace `clang-11` and `clang-11` with the default version, which is now 13. Jonathan Brielmaier
2022-06-01gnu: icedove: Update to 91.10.0 [fixes CVE-2022-1834]....* gnu/packages/gnuzilla.scm (icedove): Update to 91.10.0. Jonathan Brielmaier
2022-05-29gnu: tractor: Update to 3.13....* gnu/packages/tor.scm (tractor): Update to 3.13. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr> Danial Behzadi
2022-05-29gnu: fortune-mod: Fix fortune directory....It now matches the one given in the fortune(6) man page. * gnu/packages/games.scm (fortune-mode)[arguments]: Install to /share rather than /local/share/games. Shorten the 'fix-install-directory phase. Tobias Geerinckx-Rice
2022-06-01gnu: pigx-scrnaseq: Update to 1.1.9....* gnu/packages/bioinformatics.scm (pigx-scrnaseq): Update to 1.1.9. [arguments]: Remove 'autoreconf phase. [native-inputs]: Remove autoconf and automake. Ricardo Wurmus
2022-06-01gnu: pigx-bsseq: Update to 0.1.7....* gnu/packages/bioinformatics.scm (pigx-bsseq): Update to 0.1.7. [source]: Remove patch. [arguments]: Remove 'autoreconf phase. [native-inputs]: Remove automake and autoconf. * gnu/packages/patches/pigx-bsseq-no-citeproc.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove patch. Ricardo Wurmus
2022-06-01gnu: pigx-chipseq: Update to 0.1.0....* gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.1.0. [source]: Remove patch. [arguments]: Remove 'autoreconf phase. [native-inputs]: Remove autoconf and automake. * gnu/packages/patches/pigx-chipseq-no-citeproc.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove patch. Ricardo Wurmus
2022-06-01gnu: vim: Update to 8.2.5048....* gnu/packages/vim.scm (vim): Update to 8.2.5048. [arguments]: Patch another instance of '/bin/sh'. Efraim Flashner
2022-06-01gnu: pigx-rnaseq: Update to 0.1.0....* gnu/packages/bioinformatics.scm (pigx-rnaseq): Update to 0.1.0. [arguments]: Remove phase 'patch-knitr. Ricardo Wurmus
2022-06-01gnu: pigx-rnaseq: Update to 0.0.21....* gnu/packages/bioinformatics.scm (pigx-rnaseq): Update to 0.0.21. Ricardo Wurmus
2022-06-01gnu: pigx-rnaseq: Fix build....* gnu/packages/bioinformatics.scm (pigx-rnaseq)[arguments]: Add phase 'patch-knitr. Ricardo Wurmus
2022-05-29gnu: gnome-commander: Update to 1.14.2....* gnu/packages/gnome.scm (gnome-commander): Update to 1.14.2. Tobias Geerinckx-Rice
2022-05-29gnu: angband: Update to 4.2.4....* gnu/packages/games.scm (angband): Update to 4.2.4. [arguments]: Don't explicitly return #t from phases. Tobias Geerinckx-Rice
2022-05-29gnu: freeipmi: Update to 1.6.9....* gnu/packages/freeipmi.scm (freeipmi): Update to 1.6.9. Tobias Geerinckx-Rice
2022-05-29gnu: corefreq: Update to 1.90.1....* gnu/packages/linux.scm (corefreq): Update to 1.90.1. Tobias Geerinckx-Rice
2022-05-29gnu: services: Update setuid service description....* gnu/services.scm (setuid-program-service-type)[description]: Remove ‘root’, add ‘setgid’. Tobias Geerinckx-Rice
2022-05-29gnu: libfprint: Update to 1.94.4....* gnu/packages/freedesktop.scm (libfprint): Update to 1.94.4. Tobias Geerinckx-Rice
2022-05-29gnu: fprintd: Update to 1.94.2....* gnu/packages/freedesktop.scm (fprintd): Update to 1.94.2. Tobias Geerinckx-Rice
2022-05-29gnu: fprintd: Remove input labels....* gnu/packages/freedesktop.scm (fprintd)[native-inputs]: Remove input labels. Tobias Geerinckx-Rice
2022-05-29gnu: fprintd: Fix build....* gnu/packages/freedesktop.scm (fprintd)[native-inputs]: Add python. Tobias Geerinckx-Rice
2022-05-29gnu: beancount: Update to 2.3.5....* gnu/packages/finance.scm (beancount): Update to 2.3.5. Tobias Geerinckx-Rice
2022-05-29gnu: caf: Update to 0.18.6....* gnu/packages/cpp.scm (caf): Update to 0.18.6. Tobias Geerinckx-Rice
2022-05-29gnu: quazip: Update to 1.3....* gnu/packages/compression.scm (quazip): Update to 1.3. Tobias Geerinckx-Rice
2022-05-29gnu: foomatic-filters: Use project home page....* gnu/packages/cups.scm (foomatic-filters)[home-page]: Point upstream. Tobias Geerinckx-Rice
2022-06-01gnu: Add sylamer....* gnu/packages/bioinformatics.scm (sylamer): New variable. Ricardo Wurmus
2022-05-31gnu: linux-libre 5.10: Update to 5.10.119....* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.119. (linux-libre-5.10-pristine-source): Update hash. Leo Famulari
2022-05-31gnu: linux-libre 5.15: Update to 5.15.44....* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.44. (linux-libre-5.15-pristine-source): Update hash. Leo Famulari
2022-05-31gnu: linux-libre: Update to 5.17.12....* gnu/packages/linux.scm (linux-libre-5.17-version): Update to 5.17.12. (linux-libre-5.17-pristine-source): Update hash. Leo Famulari
2022-05-31gnu: Add r-gsalib....* gnu/packages/cran.scm (r-gsalib): New variable. Ricardo Wurmus
2022-05-31gnu: Add glibc-locales-2.32....* gnu/packages/base.scm (glibc-locales-2.32): New variable. Ricardo Wurmus
2022-05-31gnu: Add glibc-locales-2.31....* gnu/packages/base.scm (glibc-locales-2.31): New variable. Ricardo Wurmus
2022-05-31gnu: Add glibc-locales-2.30....* gnu/packages/base.scm (glibc-locales-2.30): New variable. Ricardo Wurmus
2022-05-31gnu: Add glibc-2.32....* gnu/packages/base.scm (glibc-2.32): New variable. Ricardo Wurmus
2022-05-31gnu: Remove python2-biopython....* gnu/packages/bioinformatics.scm (python2-biopython): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove pplacer-scripts....* gnu/packages/bioinformatics.scm (pplacer-scripts): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove pplacer....* gnu/packages/bioinformatics.scm (pplacer): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-pytest-cov....* gnu/packages/check.scm (python2-pytest-cov): Delete variable. Maxim Cournoyer
2022-05-31gnu: Remove python2-called-python....* gnu/packages/python.scm (python2-called-python): Delete variable. Maxim Cournoyer