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2022-05-31gnu: Remove python2-fastlmm.Maxim Cournoyer
* gnu/packages/machine-learning.scm (python2-fastlmm): Delete variable.
2022-05-31gnu: Remove python2-pytest-cache.Maxim Cournoyer
* gnu/packages/check.scm (python2-pytest-cache): Delete variable.
2022-05-31gnu: Remove python2-statsmodels.Maxim Cournoyer
* gnu/packages/statistics.scm (python2-statsmodels): Delete variable.
2022-05-31gnu: Remove python2-html5lib.Maxim Cournoyer
* gnu/packages/python-web.scm (python2-html5lib): Delete variable. (python-html5lib-0.9, python2-html5lib-0.9): Likewise.
2022-05-31gnu: Remove python2-pandas.Maxim Cournoyer
* gnu/packages/python-science.scm (python2-pandas): Delete variable. (python-pandas): Delete related python2-variant property.
2022-05-31gnu: ocrodjvu: Use a Python 3 compatible fork.Maxim Cournoyer
* gnu/packages/djvu.scm (ocrodjvu)[source]: Update URL to Python 3 fork. [inputs]: Use new style. Remove python2-subprocess32. Replace all other Python 2 inputs by their Python 3 equivalent. Add python-future and python-regex. [arguments]: Use gexps, and adjust accordingly, using this-package-input and search-input-file.
2022-05-31gnu: Remove python2-scikit-learn.Maxim Cournoyer
* gnu/packages/machine-learning.scm (python2-scikit-learn): Delete variable. (python-scikit-learn)[properties]: Remove the python2-variant property.
2022-05-31gnu: Remove python2-pytest-pep8.Maxim Cournoyer
* gnu/packages/check.scm (python2-pytest-pep8): Delete variable.
2022-05-31gnu: Remove python2-hiredis.Maxim Cournoyer
* gnu/packages/databases.scm (python2-hiredis): Delete variable.
2022-05-31gnu: Remove python2-pymysql.Maxim Cournoyer
* gnu/packages/databases.scm (python2-pymysql): Delete variable.
2022-05-31gnu: Remove python2-pyodbc-c.Maxim Cournoyer
* gnu/packages/databases.scm (python2-pyodbc-c): Delete variable.
2022-05-31gnu: Remove python2-py2neo.Maxim Cournoyer
* gnu/packages/databases.scm (python2-py2neo): Delete variable.
2022-05-31gnu: Remove python2-apsw.Maxim Cournoyer
* gnu/packages/databases.scm (python2-apsw): Delete variable.
2022-05-31gnu: Remove python2-ccm.Maxim Cournoyer
* gnu/packages/databases.scm (python2-ccm): Delete variable.
2022-05-31gnu: Remove python2-peewee.Maxim Cournoyer
* gnu/packages/databases.scm (python2-peewee): Delete variable.
2022-05-31gnu: Remove python2-trollius-redis.Maxim Cournoyer
* gnu/packages/databases.scm (python2-trollius-redis): Delete variable.
2022-05-31gnu: Remove python2-redis.Maxim Cournoyer
* gnu/packages/databases.scm (python2-redis): Delete variable.
2022-05-31gnu: Remove python2-neo4j-driver.Maxim Cournoyer
* gnu/packages/databases.scm (python2-neo4j-driver): Delete variable.
2022-05-31gnu: Remove nmoldyn.Maxim Cournoyer
* gnu/packages/chemistry.scm (nmoldyn): Delete variable.
2022-05-31gnu: Remove domainfinder.Maxim Cournoyer
* gnu/packages/chemistry.scm (domainfinder): Delete variable.
2022-05-31gnu: Remove python2-nose-randomly.Maxim Cournoyer
* gnu/packages/check.scm (python2-nose-randomly): Delete variable.
2022-05-31gnu: Remove python2-pytest-subtesthack.Maxim Cournoyer
* gnu/packages/check.scm (python2-pytest-subtesthack): Delete variable.
2022-05-31gnu: Remove python2-pytest-flakes.Maxim Cournoyer
* gnu/packages/check.scm (python2-pytest-flakes): Delete variable.
2022-05-31gnu: Remove python2-cov-core.Maxim Cournoyer
* gnu/packages/check.scm (python2-cov-core): Delete variable.
2022-05-31gnu: Remove python2-discover.Maxim Cournoyer
* gnu/packages/check.scm (python2-discover): Delete variable.
2022-05-31gnu: Remove python2-flexmock.Maxim Cournoyer
* gnu/packages/check.scm (python2-flexmock): Delete variable.
2022-05-31gnu: Remove python2-minimock.Maxim Cournoyer
* gnu/packages/check.scm (python2-minimock): Delete variable.
2022-05-31gnu: Remove python2-rednose.Maxim Cournoyer
* gnu/packages/check.scm (python2-rednose): Delete variable.
2022-05-31gnu: Remove python2-python-paramunittest.Maxim Cournoyer
* gnu/packages/check.scm (python2-python-paramunittest): Delete variable.
2022-05-31gnu: Remove python2-pytest-capturelog.Maxim Cournoyer
* gnu/packages/check.scm (python2-pytest-capturelog): Delete variable.
2022-05-31gnu: Remove python2-nose2.Maxim Cournoyer
* gnu/packages/check.scm (python2-nose2): Delete variable.
2022-05-31gnu: Remove python2-testlib.Maxim Cournoyer
* gnu/packages/check.scm (python2-testlib): Delete variable.
2022-05-31gnu: Remove python2-pytest-catchlog.Maxim Cournoyer
* gnu/packages/check.scm (python2-pytest-catchlog): Delete variable.
2022-05-31gnu: Remove python2-nose-timer.Maxim Cournoyer
* gnu/packages/check.scm (python2-nose-timer): Delete variable.
2022-05-31gnu: Remove transmission-remote-cli.Maxim Cournoyer
* gnu/packages/bittorrent.scm (transmission-remote-cli): Delete variable.
2022-05-31gnu: Remove pyicoteo.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (pyicoteo): Delete variable.
2022-05-31gnu: Remove python2-pbcore.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (python2-pbcore): Delete variable.
2022-05-31gnu: Remove python2-pyfaidx.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (python2-pyfaidx): Delete variable.
2022-05-31gnu: Remove python2-screed.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (python2-screed): Delete variable.
2022-05-31gnu: Remove miso.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (miso): Delete variable.
2022-05-31gnu: Remove python2-warpedlmm.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (python2-warpedlmm): Delete variable.
2022-05-31gnu: Remove poretools.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (poretools): Delete variable.
2022-05-31gnu: Remove python2-dendropy.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (python2-dendropy): Delete variable.
2022-05-31gnu: Remove bamm.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (bamm): Delete variable.
2022-05-31gnu: Remove python2-pybedtools.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (python2-pybedtools): Delete variable.
2022-05-31gnu: Remove python2-htseq.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (python2-htseq): Delete variable.
2022-05-31gnu: Remove pepr.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (pepr): Delete variable.
2022-05-31gnu: tetoolkit: Update to 2.2.1b.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (tetoolkit): Update to 2.2.1b. [python]: Delete argument. [phases]: Delete trailing #t. {make-writable}: Delete phase. {adjust-requirements}: New phase. {patch-invocations}: Use search-input-file. {wrap-program}: Use search-input-file. [inputs]: Remove python2-argparse. Replace python2-pysam with python-pysam. [home-page]: Update URL.
2022-05-31gnu: Remove python2-pybigwig.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (python2-pybigwig): Delete variable.
2022-05-31gnu: Remove ribodiff.Maxim Cournoyer
* gnu/packages/bioinformatics.scm (ribodiff): Delete variable.
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