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2022-01-05gnu: r-rticles: Update to 0.22....* gnu/packages/cran.scm (r-rticles): Update to 0.22. Ricardo Wurmus
2022-01-05gnu: r-datawizard: Update to 0.2.2....* gnu/packages/cran.scm (r-datawizard): Update to 0.2.2. Ricardo Wurmus
2022-01-05gnu: r-brio: Update to 1.1.3....* gnu/packages/cran.scm (r-brio): Update to 1.1.3. Ricardo Wurmus
2022-01-05gnu: r-httpuv: Update to 1.6.4....* gnu/packages/cran.scm (r-httpuv): Update to 1.6.4. * gnu/packages/patches/r-httpuv-1.5.5-unvendor-libuv.patch: Adjust to version 1.6.4. Ricardo Wurmus
2022-01-05gnu: Add r-densestbayes....* gnu/packages/cran.scm (r-densestbayes): New variable. Ricardo Wurmus
2022-01-05gnu: Add r-matrixextra....* gnu/packages/cran.scm (r-matrixextra): New variable. Ricardo Wurmus
2022-01-05gnu: r-activedriverwgs: Update to 1.0.3....* gnu/packages/bioconductor.scm (r-activedriverwgs): Update to 1.0.3. Ricardo Wurmus
2022-01-05gnu: r-activedriverwgs: Update to 1.1.2....* gnu/packages/bioconductor.scm (r-activedriverwgs): Update to 1.1.2. [propagated-inputs]: Add r-bsgenome-hsapiens-ucsc-hg38, r-bsgenome-mmusculus-ucsc-mm9, and r-bsgenome-mmusculus-ucsc-mm10. Ricardo Wurmus
2022-01-05gnu: r-valr: Update to 0.6.4....* gnu/packages/cran.scm (r-valr): Move from here... * gnu/packages/bioconductor.scm (r-valr): ...to here. Update to 0.6.4. [propagated-inputs]: Add r-rtracklayer. Ricardo Wurmus
2022-01-05gnu: r-openssl: Use openssl instead of libressl....* gnu/packages/statistics.scm (r-openssl)[arguments]: Add phase to disable versioned linking. [inputs]: Replace libressl with openssl. Ricardo Wurmus
2022-01-05gnu: r-openssl: Update to 1.4.6....* gnu/packages/statistics.scm (r-openssl): Update to 1.4.6. Ricardo Wurmus
2022-01-05gnu: musescore: Use new package style....* gnu/packages/music.scm (musescore)[source]<snippet>: Remove trailing #T. [inputs]: Remove labels. Nicolas Goaziou
2022-01-05gnu: emacs-helm-cider: Update to 0.5.0....* gnu/packages/emacs-xyz.scm (emacs-helm-cider): Update to 0.5.0. Nicolas Goaziou
2022-01-05gnu: emacs-emms: Update to 8....* gnu/packages/emacs-xyz.scm (emacs-emms): Update to 8. Nicolas Goaziou
2022-01-05gnu: python-django@2.2: Update hash....PyPI is serving a different tarball from the official home page, where this packager had downloaded it: <https://code.djangoproject.com/ticket/33411>. This is a follow-up to commit ad35d8c017fe5ddfb05341a90e171f36e9785526. * gnu/packages/django.scm (python-django-2.2)[source]: Update checksum. Marius Bakke
2022-01-05gnu: python-django@2.2: Update to 2.2.26 [security fixes]....This release fixes CVE-2021-45115, CVE-2021-45116, and CVE-2021-45452. * gnu/packages/django.scm (python-django-2.2): Update to 2.2.26. Marius Bakke
2022-01-05gnu: python-django@3.2: Update to 3.2.11 [security fixes]....This release fixes CVE-2021-45115, CVE-2021-45116, and CVE-2021-45452. * gnu/packages/django.scm (python-django-3.2): Update to 3.2.11. Marius Bakke
2022-01-05gnu: python-django: Update to 4.0.1 [security fixes]....This release fixes CVE-2021-45115, CVE-2021-45116, and CVE-2021-45452. * gnu/packages/django.scm (python-django-4.0): Update to 4.0.1. Marius Bakke
2022-01-05gnu: uBlock Origin: Update to 1.40.4....* gnu/packages/browser-extensions.scm (ublock-origin): Update to 1.40.4. Marius Bakke
2022-01-05gnu: nmrpflash: Update to 0.9.16....* gnu/packages/admin.scm (nmrpflash): Update to 0.9.16. Marius Bakke
2022-01-05gnu: lucene++: Use G-expressions....* gnu/packages/rdf.scm (lucene++)[arguments]: Rewrite as G-expressions. Tobias Geerinckx-Rice
2022-01-05gnu: lucene++: Update to 3.0.8....* gnu/packages/rdf.scm (lucene++): Update to 3.0.8. [source]: Add a nice snippet. [arguments]: Don't install the entire gtest suite. Add a custom 'check phase. [inputs]: Add zlib. Tobias Geerinckx-Rice
2022-01-05gnu: hangups: Update to 0.4.16....* gnu/packages/messaging.scm (hangups): Update to 0.4.16. [propagated-inputs]: Upgrade python-protobuf-3.6 to python-protobuf. Tobias Geerinckx-Rice
2022-01-05gnu: amsynth: Use G-expressions....* gnu/packages/music.scm (amsynth)[arguments]: Rewrite as G-expressions. Tobias Geerinckx-Rice
2022-01-05gnu: amsynth: Update to 1.12.3....* gnu/packages/music.scm (amsynth): Update to 1.12.3. Tobias Geerinckx-Rice
2022-01-05gnu: moreutils: Use G-expressions....* gnu/packages/moreutils.scm (moreutils)[arguments]: Rewrite as G-expressions. Tobias Geerinckx-Rice
2022-01-05gnu: moreutils: Update to 0.67....* gnu/packages/moreutils.scm (moreutils): Update to 0.67. Tobias Geerinckx-Rice
2022-01-05gnu: nbd: Update to 3.23....* gnu/packages/networking.scm (nbd): Update to 3.23. Tobias Geerinckx-Rice
2022-01-05gnu: itcl: Use G-expressions....* gnu/packages/tcl.scm (itcl)[arguments]: Rewrite as G-expressions. Tobias Geerinckx-Rice
2022-01-05gnu: itcl: Update to 4.2.2....* gnu/packages/tcl.scm (itcl): Update to 4.2.2. Tobias Geerinckx-Rice
2022-01-05gnu: linuxdcpp: Reanimate....* gnu/packages/direct-connect.scm (linuxdcpp)[source]: Add patch and snippet to fix build. * gnu/packages/patches/linuxdcpp-openssl-1.1.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Tobias Geerinckx-Rice
2022-01-05gnu: rinutils: Respect #:tests?...* gnu/packages/games.scm (rinutils)[arguments]: Respect #:tests? in 'check. Tobias Geerinckx-Rice
2022-01-05gnu: Add fcrackzip....* gnu/packages/compression.scm (fcrackzip): New variable. Ricardo Wurmus
2022-01-04gnu: emacs-goto-chg: Update to 1.7.4....* gnu/packages/emacs-xyz.scm (emacs-goto-chg): Update to 1.7.4. Nicolas Goaziou
2022-01-04gnu: Add r-varhandle....* gnu/packages/cran.scm (r-varhandle): New variable. Ricardo Wurmus
2022-01-04gnu: snap: Update to 7.0.3....* gnu/packages/education.scm (snap): Update to 7.0.3. Nicolas Goaziou
2022-01-04gnu: r-archr: Update to 1.0.1-1.92ab814....* gnu/packages/bioinformatics.scm (r-archr): Update to 1.0.1-1.92ab814. Ricardo Wurmus
2022-01-04gnu: asymptote: Update to 2.74....* gnu/packages/plotutils.scm (asymptote): Update to 2.74. [native-inputs]: Add autoconf, automake, boost, rapidjson, texlive-hyperref, texlive-latex-media9, texlive-latex-ocgx2. [inputs]: Add libtirpc. [arguments]<#:configure-flags>: Use gexps. <#:phases>: Fix more include statements. Add phase to prevent hard-coding tirpc include directory. Also force boostrapping. Remove trailing #T. Nicolas Goaziou
2022-01-04gnu: Add mbed-tools....* gnu/packages/embedded.scm (mbed-tools): New variable. Mathieu Othacehe
2022-01-04gnu: Add python-pdoc3....* gnu/packages/patches/python-pdoc3-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/local.mk (python-pdoc3): New variable. Mathieu Othacehe
2022-01-04gnu: stlink: Update the uri....* gnu/packages/embedded.scm (stlink)[origin]: Update it. Mathieu Othacehe
2022-01-04gnu: stlink: Update to 1.7.0....* gnu/packages/embedded.scm (stlink): Update to 1.7.0. [home-page]: Update it. Mathieu Othacehe
2022-01-04gnu: diffoscope: Update to 198....* gnu/packages/diffoscope.scm (diffoscope): Update to 198. Tobias Geerinckx-Rice
2022-01-04gnu: mpv: Update to 0.34.1....* gnu/packages/video.scm (mpv): Update to 0.34.1. Tobias Geerinckx-Rice
2022-01-04gnu: pgloader: Use G-expressions....* gnu/packages/databases.scm (pgloader)[arguments]: Rewrite as G-expressions. [inputs]: Remove input labels. Tobias Geerinckx-Rice
2022-01-04gnu: pgloader: Update to 3.6.3....* gnu/packages/databases.scm (pgloader): Update to 3.6.3. Tobias Geerinckx-Rice
2022-01-04gnu: direvent: Update to 5.3....* gnu/packages/admin.scm (direvent): Update to 5.3. [source]: Drop hard-to-maintain snippet… [arguments]: …in favour of a wider regexp in the 'substitute-file-names phase, renamed from 'patch-/bin/sh, as we also patch "/bin/kill" to keep the tests passing. Tobias Geerinckx-Rice
2022-01-04gnu: direvent: Use G-expressions....* gnu/packages/admin.scm (direvent)[source, arguments]: Rewrite using G-expressions. Don't explicitly return #t from phases. Tobias Geerinckx-Rice
2022-01-04gnu: fortune-mod: Update to 3.12.0....* gnu/packages/games.scm (fortune-mod): Update to 3.12.0. [arguments]: Adjust 'delete-failing-test phase accordingly. [native-inputs]: Add docbook-xml-5, docbook-xsl, and perl-app-xml-docbook-builder. Tobias Geerinckx-Rice
2022-01-04gnu: fortune-mod: Use G-expressions....* gnu/packages/games.scm (fortune-mod)[arguments]: Rewrite as G-expressions. Split up misnamed 'fix-build-env phase into 'enter-build-directory, 'copy-cmake-modules, and 'delete-failing-test. Don't explicitly return #t from phases. [native-inputs]: Remove input labels. Remove shlomif-cmake-modules. Tobias Geerinckx-Rice