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2017-12-21gnu: perl-libtime-parsedate: Comment out #:disallowed-references....This was introduced in commit f9c3bd2e0183b777ad3794674a360222c62633b0 but was not supported. * gnu/packages/perl.scm (perl-libtime-parsedate)[arguments]: Comment out #:disallowed-references. Ludovic Courtès
2017-12-20gnu: diffutils: Fix Gnulib/getopt cross-compilation issue....Previously cross-compilation would fail: CC xvasprintf.o xstrtol-error.c:50:16: warning: 'struct rpl_option' declared inside parameter list int exit_status) ^ xstrtol-error.c: In function 'xstrtol_error': xstrtol-error.c:84:5: error: invalid use of undefined type 'struct rpl_option' * gnu/packages/patches/diffutils-getopt.patch: New file. * gnu/packages/base.scm (diffutils)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it. Ludovic Courtès
2017-12-20gnu: gcc: Fix cross-compilation....Previously "guix build gcc@5 --target=TRIPLET" would fail like this: checking for exported symbols... /tmp/guix-build-gcc-5.5.0.drv-0/gcc-5.5.0/libcc1/configure: line 14531: -T: command not found yes checking for -rdynamic... /tmp/guix-build-gcc-5.5.0.drv-0/gcc-5.5.0/libcc1/configure: line 14541: -T: command not found no checking for library containing dlopen... -ldl checking for -fPIC -shared... yes configure: error: Building GCC with plugin support requires a host that supports -fPIC, -shared, -ldl and -rdynamic. * gnu/packages/gcc.scm (gcc-4.7)[maybe-target-tools]: Add "OBJDUMP". (gcc-5)[source](snippet, modules): New fields. Ludovic Courtès
2017-12-19gnu: icu4c: Update to 60.2....* gnu/packages/icu4c.scm (icu4c): Update to 60.2. Marius Bakke
2017-12-19gnu: gtk+: Update to 3.22.26....* gnu/packages/gtk.scm (gtk+): Update to 3.22.26. Marius Bakke
2017-12-19gnu: harfbuzz: Update to 1.7.3....* gnu/packages/gtk.scm (harfbuzz): Update to 1.7.3. Marius Bakke
2017-12-19gnu: Remove redundant cmake libdir configure flags....* gnu/packages/bioinformatics.scm (imp)[arguments]: Remove CMAKE_INSTALL_LIBDIR flag. * gnu/packages/calendar.scm (libical): Same. * gnu/packages/engineering.scm (kicad): Same. * gnu/packages/games.scm (openrct2, mgba): Same. * gnu/packages/gl.scm (virtualgl): Same. * gnu/packages/image-processing.scm (mia): Same. * gnu/packages/linux.scm (rdma-core): Same. * gnu/packages/machine-learning.scm (dlib): Same. * gnu/packages/maths.scm (lapack, superlu, z3): Same. * gnu/packages/password-utils.scm (keepassxc): Same. * gnu/packages/photo.scm (darktable): Same. * gnu/packages/rdesktop.scm (freerdp): Same. Efraim Flashner
2017-12-19gnu: ruby: Remove graft for 2.4.3....* gnu/packages/ruby.scm (ruby): Update to 2.4.3. (ruby-2.4.3): Remove variable. Marius Bakke
2017-12-19gnu: openssl: Remove graft for 1.0.2n....* gnu/packages/tls.scm (openssl): Update to 1.0.2n. (openssl-1.0.2n): Remove variable. Marius Bakke
2017-12-19Merge branch 'master' into core-updatesMarius Bakke
2017-12-19gnu: termite: Update to 13....* gnu/packages/terminals.scm (termite): Update to 13. Marius Bakke
2017-12-19gnu: pcsc-lite: Update to 1.8.23....* gnu/packages/security-token.scm (pcsc-lite): Update to 1.8.23. [arguments]<#:configure-flags>: Add "--disable-libsystemd". [license]: Adjust to removed sd-daemon files. Marius Bakke
2017-12-19gnu: qemu: Update to 2.10.2....* gnu/packages/patches/qemu-CVE-2017-15118.patch, gnu/packages/patches/qemu-CVE-2017-15119.patch, gnu/packages/patches/qemu-CVE-2017-15268.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. * gnu/packages/virtualization.scm (qemu): Update to 2.10.2. [source](patches): Remove obsolete. Marius Bakke
2017-12-19gnu: libdrm: Update to 2.4.89....* gnu/packages/xdisorg.scm (libdrm): Update to 2.4.89. Marius Bakke
2017-12-18gnu: libjpeg-turbo: Update to 1.5.3....* gnu/packages/image.scm (libjpeg-turbo): Update to 1.5.3. Marius Bakke
2017-12-18gnu: libsodium: Update to 1.0.16....* gnu/packages/crypto.scm (libsodium): Update to 1.0.16. Marius Bakke
2017-12-18gnu: expect: Update to 5.45.3....* gnu/packages/tcl.scm (expect): Update to 5.45.3. Marius Bakke
2017-12-18gnu: deutex: Update to 5.1.0....* gnu/packages/games.scm (deutex): Update to 5.1.0. Kei Kebreau
2017-12-18gnu: emacspeak: Update to 47.0....* gnu/packages/emacs.scm (emacspeak): Update to 47.0. [source]: Remove snippet. [arguments]: Set SHELL environment variable. Kei Kebreau
2017-12-18gnu: rsync: Patch CVE-2017-{16548,17433,17434}....* gnu/packages/rsync.scm (rsync)[source]: Add patches. [properties]: Mark CVE-2017-15994 as not relevant. * gnu/packages/patches/rsync-CVE-2017-16548.patch, gnu/packages/patches/rsync-CVE-2017-17433.patch, gnu/packages/patches/rsync-CVE-2017-17433-fix-tests.patch, gnu/packages/patches/rsync-CVE-2017-17434-pt1.patch, gnu/packages/patches/rsync-CVE-2017-17434-pt2.patch: New files. * gnu/local.mk (dist_patch_DATA): Register them. Efraim Flashner
2017-12-18gnu: psm: Update home page URL....* gnu/packages/linux.scm (psm)[home-page]: Update. [source](uri): Use it. Ludovic Courtès
2017-12-18gnu: Fix ambiguous 'zip' reference....* gnu/packages/photo.scm: Hide 'zip' from (srfi srfi-1). Ludovic Courtès
2017-12-18system: examples: Add a template for BeagleBone Black....* gnu/system/examples/beaglebone-black.tmpl: New file. * Makefile.am (EXAMPLES): Add it. * gnu/system/install.scm (/etc/configuration-files): Add it. Mathieu Othacehe
2017-12-18gnu: claws-mail: Update to 3.16.0....* gnu/packages/mail.scm (claws-mail): Update to 3.16.0. Tobias Geerinckx-Rice
2017-12-18services: nginx: Allow to add raw content to the server blocks....* doc/guix.texi (Web Services): Document 'raw-content'. * gnu/services/web.scm (<nginx-server-configuration>)[raw-content]: New field. (emit-nginx-server-config): Add it. Clément Lassieur
2017-12-18services: nginx: Replace 'http-port' and 'https-port' with 'listen'....* doc/guix.texi (Web Services, Version Control Services): Update accordingly. * gnu/services/certbot.scm (certbot-nginx-server-configurations): Likewise. * gnu/services/version-control.scm (%cgit-configuration-nginx): Likewise. * gnu/services/web.scm (<nginx-server-configuration>, emit-nginx-server-config): Likewise. * gnu/tests/version-control.scm (%cgit-configuration-nginx, %git-nginx-configuration): Likewise. * gnu/tests/web.scm (%nginx-servers, %php-fpm-nginx-server-blocks): Likewise. Clément Lassieur
2017-12-18gnu: r-seurat: Update to 2.1.0....* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.1.0. [propagated-inputs]: Add r-diffusionmap, r-dtw, r-ggjoy, r-hmisc, r-ica, r-mass, r-matrix, r-nmf, r-plotly, r-sdmtools, r-tidyr; remove r-plyr, r-rcppeigen, r-fastica. Ricardo Wurmus
2017-12-18gnu: Add r-diffusionmap....* gnu/packages/graph.scm (r-diffusionmap): New variable. Ricardo Wurmus
2017-12-18gnu: Add r-ggjoy....* gnu/packages/cran.scm (r-ggjoy): New variable. Ricardo Wurmus
2017-12-18gnu: Add r-ggridges....* gnu/packages/cran.scm (r-ggridges): New variable. Ricardo Wurmus
2017-12-18gnu: Add r-scatterplot3d....* gnu/packages/cran.scm (r-scatterplot3d): New variable. Ricardo Wurmus
2017-12-18gnu: Add r-sdmtools....* gnu/packages/cran.scm (r-sdmtools): New variable. Ricardo Wurmus
2017-12-18gnu: Add r-dtw....* gnu/packages/cran.scm (r-dtw): New variable. Ricardo Wurmus
2017-12-18gnu: Add r-ica....* gnu/packages/cran.scm (r-ica): New variable. Ricardo Wurmus
2017-12-18gnu: r-seurat: Fix ModularityOptimizer.jar....* gnu/packages/bioinformatics.scm (r-seurat)[arguments]: Include Main-Class attribute in manifest. Ricardo Wurmus
2017-12-18gnu: qmidiarp: Update to 0.6.5....* gnu/packages/music.scm (qmidiarp): Update to 0.6.5. Ricardo Wurmus
2017-12-18gnu: Add noise-repellent....* gnu/packages/audio.scm (noise-repellent): New variable. Ricardo Wurmus
2017-12-18gnu: Add aj-snapshot....* gnu/packages/music.scm (aj-snapshot): New variable. Ricardo Wurmus
2017-12-18gnu: Add jack-capture....* gnu/packages/music.scm (jack-capture): New variable. Ricardo Wurmus
2017-12-18gnu: Add qjackrcd....* gnu/packages/audio.scm (qjackrcd): New variable. Ricardo Wurmus
2017-12-18gnu: Add whysynth....* gnu/packages/music.scm (whysynth): New variable. Ricardo Wurmus
2017-12-18gnu: Add sonivox-eas....* gnu/packages/music.scm (sonivox-eas): New variable. Ricardo Wurmus
2017-12-18gnu: ncurses: Fix cross-compilation....This fixes a regression introduced in 667082d59104d4b964dce878f5e8c0f8ad1be958 whereby cross-compiling ncurses would fail. * gnu/packages/ncurses.scm (ncurses)[arguments]: In CONFIGURE-PHASE, get "rollup-patch" from NATIVE-INPUTS when cross-compiling. Ludovic Courtès
2017-12-18vm: Pass the host's /dev/urandom to the guest at /dev/hwrng....* gnu/build/vm.scm (load-in-linux-vm): Use QEMU's virtio-rng-pci. * gnu/system/vm.scm (common-qemu-options): Likewise. Leo Famulari
2017-12-17gnu: openssl: Update replacement to 1.0.2n [fixes CVE-2017-{3737,3738}]....* gnu/packages/tls.scm (openssl)[replacement]: Use openssl-1.0.2n. (openssl-1.0.2m): Replace with ... (openssl-1.0.2n): ... this updated version. Update comment. Mark H Weaver
2017-12-18gnu: retroarch: Enable Vulkan support....* gnu/packages/games.scm (retroarch)[arguments]: Hard-code the path to libvulkan.so. [inputs]: Add vulkan-icd-loader. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Rutger Helling
2017-12-18gnu: vulkan: Add vulkan-icd-loader....* gnu/packages/vulkan.scm (vulkan-icd-loader): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Rutger Helling
2017-12-18gnu: vulkan: Add glslang....* gnu/packages/vulkan.scm (glslang): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Rutger Helling
2017-12-18gnu: vulkan: Add spirv-tools....* gnu/packages/vulkan.scm (spirv-tools): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Rutger Helling
2017-12-18gnu: vulkan: Add spirv-headers....* gnu/packages/vulkan.scm: Create file. (spirv-headers): New variable. * gnu/local.mk: Add vulkan.scm. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Rutger Helling
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