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2015-06-18gnu: ocaml: Update gcc:lib input to gcc-4.9.•••* gnu/packages/ocaml.scm (ocaml)[inputs]: Use gcc:lib from gcc-4.9. Mark H Weaver
2015-06-18Merge branch 'master' into core-updatesMark H Weaver
2015-06-18gnu: guix: Update snapshot.•••* gnu/packages/package-management.scm (guix-devel): Update to 684bf7c. Mark H Weaver
2015-06-17gnu: cpio: Fix symlink-bad-length test.•••* gnu/packages/patches/cpio-fix-symlink-bad-length-test.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/cpio.scm (cpio): Add patch. Mark H Weaver
2015-06-17gnu: Add diamond.•••* gnu/packages/bioinformatics.scm (diamond): New variable. Ben Woodcroft
2015-06-18Move 'specification->package+output' to (gnu packages).•••* guix/scripts/package.scm (specification->package+output): Move to... * gnu/packages.scm (specification->package+output): ... here * guix/scripts/archive.scm (guix): Adjust accordingly. Ludovic Courtès
2015-06-18install: Turn off deduplication for the binary tarball.•••* gnu/build/install.scm (register-closure): Add #:deduplicate? parameter and honor it. (populate-single-profile-directory): Likewise. * gnu/system/install.scm (self-contained-tarball): Pass #:deduplicate? #f. Invoke tar with --check-links. Ludovic Courtès
2015-06-18gnu: ocaml: Don't rely on (gnu packages commencement).•••* gnu/packages/ocaml.scm (ocaml)[inputs]: Use (canonical-package gcc-4.8) instead of GCC-FINAL. Ludovic Courtès
2015-06-17gnu: guix: Update snapshot.•••* gnu/packages/package-management.scm (guix-devel): Update to 2c04921. Mark H Weaver
2015-06-17gnu: miso: Use HTTPS URL.•••* gnu/packages/bioinformatics.scm (miso)[source]: Use "https" protocol for downloading the source tarball. Ricardo Wurmus
2015-06-17gnu: bedops: Update to 2.4.14.•••* gnu/packages/bioinformatics.scm (bedops): Update to 2.4.14. Ricardo Wurmus
2015-06-17gnu: Add wayland.•••* gnu/packages/freedesktop.scm (wayland): New variable. 宋文武
2015-06-16system: Rename 'sudoers' into 'sudoers-file'.•••* gnu/system.scm (<operating-system>): Rename record field. (etc-directory): Rename argument. (operating-system-etc-directory): Adjust accordingly. * doc/guix.texi (operating-system Reference): Likewise. Alex Kost
2015-06-16gnu: talloc: Change source URI to use https.•••* gnu/packages/samba.scm (talloc)[source]: Change URI to use https. Mark H Weaver
2015-06-16gnu: qt: Add more inputs.•••* gnu/packages/qt.scm (qt)[inputs]: Add cups, libmng, postgresql and unixodbc. 宋文武
2015-06-16gnu: Add libmng.•••* gnu/packages/image.scm (libmng): New variable. 宋文武
2015-06-16gnu: qt: Update to 5.4.2.•••* gnu/packages/qt.scm (qt): Update to 5.4.2. 宋文武
2015-06-16gnu: qt-4: Update to 4.8.7.•••* gnu/packages/qt.scm (qt-4): Update to 4.8.7. 宋文武
2015-06-16gnu: talloc: Update to 2.1.2.•••* gnu/packages/samba.scm (talloc): Update to 2.1.2. 宋文武
2015-06-16gnu: calibre: Update to 2.30.0.•••* gnu/packages/ebook.scm (calibre): Update to 2.30.0. Andreas Enge
2015-06-16gnu: libtiff: Add fixes for several CVEs.•••* gnu/packages/patches/libtiff-CVE-2012-4564.patch, gnu/packages/patches/libtiff-CVE-2013-1960.patch, gnu/packages/patches/libtiff-CVE-2013-1961.patch, gnu/packages/patches/libtiff-CVE-2013-4231.patch, gnu/packages/patches/libtiff-CVE-2013-4232.patch, gnu/packages/patches/libtiff-CVE-2013-4243.patch, gnu/packages/patches/libtiff-CVE-2013-4244.patch, gnu/packages/patches/libtiff-CVE-2014-8127-pt1.patch, gnu/packages/patches/libtiff-CVE-2014-8127-pt2.patch, gnu/packages/patches/libtiff-CVE-2014-8127-pt3.patch, gnu/packages/patches/libtiff-CVE-2014-8127-pt4.patch, gnu/packages/patches/libtiff-CVE-2014-8128-pt1.patch, gnu/packages/patches/libtiff-CVE-2014-8128-pt2.patch, gnu/packages/patches/libtiff-CVE-2014-8128-pt3.patch, gnu/packages/patches/libtiff-CVE-2014-8128-pt4.patch, gnu/packages/patches/libtiff-CVE-2014-8128-pt5.patch, gnu/packages/patches/libtiff-CVE-2014-8129.patch, gnu/packages/patches/libtiff-CVE-2014-9330.patch, gnu/packages/patches/libtiff-CVE-2014-9655.patch: New files. * gnu-system.am (dist_patch_DATA): Add them. * gnu/packages/image.scm (libtiff)[source]: Add patches. Mark H Weaver
2015-06-16Merge branch 'master' into core-updatesMark H Weaver
2015-06-16gnu: qemu: Add fixes for CVE-2015-{4037,4103,4104,4105,4106}.•••* gnu/packages/patches/qemu-CVE-2015-4037.patch, gnu/packages/patches/qemu-CVE-2015-4103.patch, gnu/packages/patches/qemu-CVE-2015-4104.patch, gnu/packages/patches/qemu-CVE-2015-4105.patch, gnu/packages/patches/qemu-CVE-2015-4106-pt1.patch, gnu/packages/patches/qemu-CVE-2015-4106-pt2.patch, gnu/packages/patches/qemu-CVE-2015-4106-pt3.patch, gnu/packages/patches/qemu-CVE-2015-4106-pt4.patch, gnu/packages/patches/qemu-CVE-2015-4106-pt5.patch, gnu/packages/patches/qemu-CVE-2015-4106-pt6.patch, gnu/packages/patches/qemu-CVE-2015-4106-pt7.patch, gnu/packages/patches/qemu-CVE-2015-4106-pt8.patch: New files. * gnu-system.am (dist_patch_DATA): Add them. * gnu/packages/qemu.scm (qemu-headless)[source]: Add patches. Mark H Weaver
2015-06-16gnu: git: Update to 2.4.3.•••* gnu/packages/version-control.scm (git, git-manpages): Update to 2.4.3. Mark H Weaver
2015-06-15gnu: ffmpeg: Update to 2.7.•••* gnu/packages/video.scm (ffmpeg): Update to 2.7. [native-inputs]: Add texinfo. Mark H Weaver
2015-06-15gnu: sqlite: Update to 3.8.10.2.•••* gnu/packages/databases.scm (sqlite): Update to 3.8.10.2. Mark H Weaver
2015-06-15gnu: Add ruby-multipart-post.•••* gnu/packages/ruby.scm (ruby-multipart-post): New variable. David Thompson
2015-06-15gnu: Add ruby-slop.•••* gnu/packages/ruby.scm (ruby-slop): New variable. David Thompson
2015-06-15gnu: Add ruby-git.•••* gnu/packages/ruby.scm (ruby-git): New variable. David Thompson
2015-06-15gnu: Add ruby-minitest-bacon.•••* gnu/packages/ruby.scm (ruby-minitest-bacon): New variable. David Thompson
2015-06-15gnu: Add ruby-minitest-sprint.•••* gnu/packages/ruby.scm (ruby-minitest-sprint): New variable. David Thompson
2015-06-15gnu: Add ruby-minitest.•••* gnu/packages/ruby.scm (ruby-minitest): New variable. David Thompson
2015-06-15gnu: Add ruby-daemons.•••* gnu/packages/ruby.scm (ruby-daemons): New variable. David Thompson
2015-06-15gnu: Add ruby-net-http-persistent.•••* gnu/packages/ruby.scm (ruby-net-http-persistent): New variable. David Thompson
2015-06-15gnu: Add ruby-connection-pool.•••* gnu/packages/ruby.scm (ruby-connection-pool): New variable. David Thompson
2015-06-15gnu: Add ruby-arel.•••* gnu/packages/ruby.scm (ruby-arel): New variable. David Thompson
2015-06-15gnu: Add ruby-bacon.•••* gnu/packages/ruby.scm (ruby-bacon): New variable. David Thompson
2015-06-16gnu: tar: Skip tests that rely on undefined unlinkat(2) behavior.•••Fixes <http://bugs.gnu.org/20597>. Reported by Andrew Patterson <ajpatter@uwaterloo.ca>. * gnu/packages/patches/tar-skip-unreliable-tests.patch: New file. * gnu/packages/base.scm (tar)[source](patches): Add it. * gnu-system.am (dist_patch_DATA): Add it. Ludovic Courtès
2015-06-15gnu: gettext: Fix non-deterministic msgunfmt behavior.•••Suggested by Alírio Eyng <alirioeyng@gmail.com>. * gnu/packages/patches/gettext-msgunfmt.patch: New file. * gnu/packages/gettext.scm (gnu-gettext)[source]: Use it. * gnu-system.am (dist_patch_DATA): Add it. Ludovic Courtès
2015-06-15gnu: Rename (gnu packages dwm) to (gnu packages suckless).•••* gnu/packages/dwm.scm: Rename this ... * gnu/packages/suckless.scm: ... to this. * gnu-system.am (GNU_SYSTEM_MODULES): Change dwm.scm to suckless.scm. amz3
2015-06-15gnu: Add st.•••* gnu/packages/dwm.scm (st): New variable. amz3
2015-06-15services: Remove lsh service from %DESKTOP-SERVICES.•••Suggested by Mark H Weaver and others at <http://lists.gnu.org/archive/html/guix-devel/2015-06/msg00227.html>. * gnu/services/desktop.scm (%desktop-services): Remove call to 'lsh-service'. * doc/guix.texi (Desktop Services): Adjust accordingly. Ludovic Courtès
2015-06-15gnu: Add haskell-mode.•••* gnu/packages/emacs.scm (haskell-mode): New variable. Federico Beffa
2015-06-15gnu: make-bootstrap: Build libbacktrace, required by cc1.•••Fixes <http://hydra.gnu.org/build/506982/nixlog/1/tail-reload>. * gnu/packages/make-bootstrap.scm (%gcc-static): Remove --disable-libbacktrace. It is needed by cc1-checksum. Ludovic Courtès
2015-06-15gnu: python-scikit-learn: Update to 0.16.1.•••* gnu/packages/python.scm (python-scikit-learn): Update to 0.16.1. Ricardo Wurmus
2015-06-15gnu: orfm: Update to 0.4.1.•••* gnu/packages/bioinformatics.scm (orfm): Update to 0.4.1. Ricardo Wurmus
2015-06-15gnu: python-scikit-learn: Use OpenBLAS instead of ATLAS.•••* gnu/packages/python.scm (python-scikit-learn)[inputs]: Replace "atlas" with "openblas". * gnu/packages/python.scm (python-scikit-learn)[arguments]: Remove build phase 'set-environment-variables, which is only needed when ATLAS is used. Ricardo Wurmus
2015-06-15gnu: python-scipy: Build with OpenBLAS and lapack.•••* gnu/packages/python.scm (python-scipy)[inputs]: Remove "atlas", add "lapack" and "openblas". * gnu/packages/python.scm (python-scipy)[arguments]: Replace phase "set-environment-variables" with "configure-openblas". Ricardo Wurmus
2015-06-15gnu: python-numpy-bootstrap: Add lapack to inputs.•••* gnu/packages/python.scm (python-numpy-bootstrap)[inputs]: Add lapack to inputs, because OpenBLAS does not include lapack functions. Ricardo Wurmus
2015-06-15gnu: lv2: Update to 1.12.0.•••* gnu/packages/audio.scm (lv2): Update to 1.12.0. Ricardo Wurmus
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