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2020-06-16gnu: python-ipython: Use python-prompt-toolkit-2....This prevents conflicting variants of python-prompt-toolkit from being installed, which prevented jupyter from being installed. * gnu/packages/python-xyz.scm (python-ipython)[propagated-inputs]: Replace python-prompt-toolkit with python-prompt-toolkit-2. (python-widgetsnbextension)[propagated-inputs]: Do not use prompt-toolkit-2-instead-of-prompt-toolkit on python-ipykernel. (python-ipywidgets)[propagated-inputs]: Do not use prompt-toolkit-2-instead-of-prompt-toolkit on python-ipython. (python-jupyter-console)[propagated-inputs]: Do not use prompt-toolkit-2-instead-of-prompt-toolkit on python-ipykernel. (prompt-toolkit-2-instead-of-prompt-toolkit): Remove variable. * gnu/packages/machine-learning.scm (python-iml)[propagated-inputs]: Do not use prompt-toolkit-2-instead-of-prompt-toolkit on python-ipython. Ricardo Wurmus
2020-06-16installer: final: Remove restart-service procedure....* gnu/installer/final.scm (umount-cow-store): Remove "restart-service" that is now provided by (gnu services herd). Mathieu Othacehe
2020-06-16gnu: libmateweather: Fix tests....Apply the following upstream fix: https://github.com/mate-desktop/libmateweather/commit/ea13e06563fb5fa53f8a9643156a64825e986acb. * gnu/packages/mate.scm (libmateweather)[source]: Fix tests by renaming America/Godthab timezone to America/Nuuk. Mathieu Othacehe
2020-06-16gnu: nix: Look for configuration in /etc....Fixes <http://issues.guix.gnu.org/41704>. * gnu/packages/package-management.scm (nix)[arguments]: Add ‘--sysconfdir=/etc’ configure flag and override it during installation. Requested-and-tested-by: Peng Mei Yu <pengmeiyu@riseup.net> Tobias Geerinckx-Rice
2020-06-16gnu: emacs-god-mode: Update to 2.17.0....* gnu/packages/emacs-xyz.scm (emacs-god-mode): Update to 2.17.0. Ricardo Wurmus
2020-06-16gnu: bsnes: Remove unnecessary inputs....* gnu/packages/emulators.scm (bsnes)[inputs]: Remove gt+-2 and libx11. Pierre Neidhardt
2020-06-16gnu: Add rust-nom-5....* gnu/packages/crates-io.scm (rust-nom-5): New variable. (rust-nom-4.2): Inherit from rust-nom-5. Efraim Flashner
2020-06-16gnu: Add rust-lexical-core-0.7....* gnu/packages/crates-io.scm (rust-lexical-core-0.7): New variable. (rust-lexical-core-0.4): Inherit from rust-lexical-core-0.7. Efraim Flashner
2020-06-16gnu: Add rust-static-assertions-1....* gnu/packages/crates-io.scm (rust-static-assertions-1): New variable. (rust-static-assertions-0.3): Inherit from rust-static-assertions-1. Efraim Flashner
2020-06-16gnu: Add bsnes....* gnu/packages/emulators.scm (bsnes): New variable. Pierre Neidhardt
2020-06-16gnu: r-xgboost: Update to 1.1.1.1....* gnu/packages/cran.scm (r-xgboost): Update to 1.1.1.1. Ricardo Wurmus
2020-06-16gnu: r-genenet: Update to 1.2.15....* gnu/packages/cran.scm (r-genenet): Update to 1.2.15. Ricardo Wurmus
2020-06-16gnu: r-performance: Update to 0.4.7....* gnu/packages/cran.scm (r-performance): Update to 0.4.7. Ricardo Wurmus
2020-06-16gnu: r-abn: Update to 2.2.1....* gnu/packages/cran.scm (r-abn): Update to 2.2.1. [propagated-inputs]: Add r-boot, r-brglm, r-entropy, and r-moments. Ricardo Wurmus
2020-06-16gnu: r-vioplot: Update to 0.3.5....* gnu/packages/cran.scm (r-vioplot): Update to 0.3.5. [native-inputs]: Add r-knitr. Ricardo Wurmus
2020-06-16gnu: r-circlize: Update to 0.4.10....* gnu/packages/cran.scm (r-circlize): Update to 0.4.10. Ricardo Wurmus
2020-06-16gnu: Add r-entropy....* gnu/packages/cran.scm (r-entropy): New variable. Ricardo Wurmus
2020-06-16gnu: Add r-brglm....* gnu/packages/cran.scm (r-brglm): New variable. Ricardo Wurmus
2020-06-16gnu: Add r-profilemodel....* gnu/packages/cran.scm (r-profilemodel): New variable. Ricardo Wurmus
2020-06-16gnu: emacs-yasnippet: Clean-up package definition....An old snippet was causing the build to fail when using Emacs 27. * gnu/packages/emacs-xyz.scm (emacs-yasnippet)[source]: Use git-file-name, and remove obsolete snippet. [phases]{home}: New phase. This allows the rebindings test to pass. {make-tests-writable, delete-rebinding-test}: Remove phases. [description]: Re-indent. Maxim Cournoyer
2020-06-16gnu: volk: Improve description mark-up....* gnu/packages/engineering.scm (volk)[description]: Substitute @acronym for the less appropriate @code. Tobias Geerinckx-Rice
2020-06-16gnu: volk: Fix typo in description....* gnu/packages/engineering.scm (volk)[description]: Fix typo. Tobias Geerinckx-Rice
2020-06-16gnu: inxi-minimal: Update to 3.1.03-1....* gnu/packages/admin.scm (inxi-minimal): Update to 3.1.03-1. Tobias Geerinckx-Rice
2020-06-16gnu: tup: Update to 0.7.9....* gnu/packages/build-tools.scm (tup): Update to 0.7.9. Tobias Geerinckx-Rice
2020-06-15gnu: glade3: Enable tests....* gnu/packages/gnome.scm (glade3)[arguments]: Enable tests. Add custom pre-check phase. [native-inputs]: Add hicolor-icon-theme and xorg-server-for-tests. Arun Isaac
2020-06-15gnu: cuirass: Update to 0.0.1-32.3db603c....* gnu/packages/ci.scm (cuirass): Update to 0.0.1-32.3db603c. Mathieu Othacehe
2020-06-15gnu: volk: Make retained references non-native inputs....* gnu/packages/engineering.scm (volk)[native-inputs]: Move python-wrapper and python-mako… [inputs]: …here. Tobias Geerinckx-Rice
2020-06-15gnu: volk: Update to 2.3.0....* gnu/packages/engineering.scm (volk): Update to 2.3.0. Tobias Geerinckx-Rice
2020-06-15gnu: r-limma: Update to 3.44.3....* gnu/packages/bioinformatics.scm (r-limma): Update to 3.44.3. Ricardo Wurmus
2020-06-15gnu: openmw: Update to 0.46.0....* gnu/packages/game-development.scm (openmw): Update to 0.46.0. Pierre Neidhardt
2020-06-15gnu: quassel: Add context menu for d-bus tray icon....* gnu/packages/irc.scm (quassel)[inputs]: Add libdbusmenu-qt. Efraim Flashner
2020-06-15gnu: quassel: Fix build with qt-5.14....* gnu/packages/irc.scm (quassel)[source]: Add patch. * gnu/packages/patches/quassel-qt-514-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner
2020-06-15gnu: emacs-debbugs: Update to 0.24....* gnu/packages/emacs-xyz.scm (emacs-debbugs): Update to 0.24. Nicolas Goaziou
2020-06-15gnu: Add emacs-flycheck-guile.... * gnu/packages/emacs-xyz.scm (emacs-flycheck-guile): New variable. Andrew Whatson
2020-06-14gnu: inkscape: Add the glib-or-gtk-build-system phases....This fixes an issue where an improperly set XDG_DATA_DIRS environment variable would cause a segfault when opening the 'Save As' menu of Inkscape. See: <https://lists.gnu.org/archive/html/help-guix/2020-06/msg00093.html>. * gnu/packages/inkscape.scm (inkscape-1.0)[arguments]: Import the (guix build glib-or-gtk-build-system) module. [phases]: Add the glib-or-gtk-compile-schemas and glib-or-gtk-wrap phases. Reported-by: Thorsten Wilms <t_w_@freenet.de> Maxim Cournoyer
2020-06-14gnu: emacs-org-reveal: Update to 20200607....* gnu/packages/emacs-xyz.scm (emacs-org-reveal): Update to 20200607. Maxim Cournoyer
2020-06-14gnu: Add tup....* gnu/packages/build-tools.scm (tup): New variable. * gnu/packages/patches/tup-unbundle-dependencies.patch: New file. * gnu/local.mk (dist_patch_DATA): Register new file. Jakub Kądziołka
2020-06-14gnu: Add iputils....* gnu/packages/patches/iputils-libcap-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/networking.scm (iputils): New public variable. Marius Bakke
2020-06-14gnu: docbook: Add 5.0.1....* gnu/packages/docbook.scm (docbook-xml-5): New public variable. (docbook-xml): Inherit from it. While at it, remove trailing whitespace. Marius Bakke
2020-06-14gnu: Add ndisc6....* gnu/packages/networking.scm (ndisc6): New public variable. Marius Bakke
2020-06-14gnu: Add ghc-psqueue....* gnu/packages/haskell-xyz.scm (ghc-psqueue): New public variable. Marius Bakke
2020-06-14gnu: Add shelltestrunner....* gnu/packages/haskell-apps.scm (shelltestrunner): New public variable. Marius Bakke
2020-06-14gnu: Add ghc-regex-pcre....* gnu/packages/haskell-xyz.scm (ghc-regex-pcre): New public variable. Marius Bakke
2020-06-14gnu: Add ghc-curl....* gnu/packages/haskell-web.scm (ghc-curl): New public variable. Marius Bakke
2020-06-15gnu: Add go-github-com-mattn-go-pointer....* gnu/packages/golang.scm (go-github-com-mattn-go-pointer): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Martin Becze
2020-06-15gnu: Add go-golang-org-x-oauth2....* gnu/packages/golang.scm (go-golang-org-x-oauth2): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Martin Becze
2020-06-14gnu: emacs-erc-status-sidebar: Placate 'guix lint'....* gnu/packages/emacs-xyz.scm (emacs-erc-status-sidebar)[source]: Add 'file-name'. [synopsis, description]: Adjust. Ludovic Courtès
2020-06-14gnu: Add emacs-erc-status-sidebar....* gnu/packages/emacs-xyz.scm (emacs-erc-status-sidebar): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Michael Rohleder
2020-06-14gnu: Add augustus....* gnu/packages/games.scm (augustus): New variable. Pierre Neidhardt
2020-06-14gnu: diffoscope: Update to 147....* gnu/packages/diffoscope (diffoscope): Update to 147. Vagrant Cascadian
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