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2022-04-18gnu: ntp: Support cross-compilation....* gnu/packages/ntp.scm (ntp)[arguments]: Add configuration flag. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Petr Hodina
2022-04-18gnu: openjdk17: Make big cursors work....* gnu/packages/java.scm (openjdk17)[source]: Add patch. Danny Milosavljevic
2022-04-18gnu: openjdk16: Make big cursors work....* gnu/packages/java.scm (openjdk16)[source]: Add patch. Danny Milosavljevic
2022-04-18gnu: openjdk15: Make big cursors work....* gnu/packages/patches/openjdk-15-xcursor-no-dynamic.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/java.scm (openjdk15)[source]: Add it. Danny Milosavljevic
2022-04-18gnu: Add cl-ipfs-api2....* gnu/packages/lisp-xyz.scm (cl-ipfs-api2, ecl-cl-ipfs-api2, sbcl-cl-ipfs-api2): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> jgart
2022-04-18gnu: Mutt: Update to 2.2.3 [fixes CVE-2022-1328]....https://gitlab.com/muttmua/mutt/-/issues/404 * gnu/packages/mail.scm (mutt): Update to 2.2.3. Leo Famulari
2022-04-17gnu: ccache: Update to 4.6....* gnu/packages/ccache.scm (ccache): Update to 4.6. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Greg Hogan
2022-04-17gnu: gnucash: Update to 4.10....Variables gnucash and gnucash-docs have to be updated together. * gnu/packages/gnucash.scm (gnucash)[version]: Update to 4.10. (gnucash-docs)[version]: Update to 4.10. [build-system]: Migrate from gnu to cmake. [arguments]: Disable tests. Raghav Gururajan
2022-04-16gnu: linux-libre 4.19: Update to 4.19.238....* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.238. (linux-libre-4.19-pristine-source): Update hash. Leo Famulari
2022-04-16gnu: linux-libre 5.4: Update to 5.4.189....* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.189. (linux-libre-5.4-pristine-source): Update hash. Leo Famulari
2022-04-16gnu: bitcoin-unlimited: Update to 1.10.0.0....* gnu/packages/finance.scm (bitcoin-unlimited): Update to 1.10.0.0. [arguments]: Update 'fix-tests' phase. Guillaume Le Vaillant
2022-04-16gnu: electrum: Update to 4.2.1....* gnu/packages/finance.scm (electrum): Update to 4.2.1. [inputs]: Replace python-aiorpcx-0.18 by python-aiorpcx. Add zbar. Guillaume Le Vaillant
2022-04-16gnu: electron-cash: Update to 4.2.7....* gnu/packages/finance.scm (electron-cash): Update to 4.2.7. Guillaume Le Vaillant
2022-04-15gnu: emacs-message-view-patch: Update to 0.2.0-40bc2e5...* gnu/packages/emacs-xyz (emacs-message-view-patch): Update it. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Dominic Martinez
2022-04-15gnu: emacs-mu4e-patch: Rename to emacs-message-view-patch...The name was changed upstream to reflect that this extension works for both mu4e and gnus. * gnu/packages/emacs-xyz.scm (emacs-mu4e-patch): Deprecate it. (emacs-message-view-patch): Renamed from emacs-mu4e-patch. Description, synopsis, and inputs adjusted to reflect that mu4e is not required. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Dominic Martinez
2022-04-15gnu: xfce4-diskperf-plugin: Update to 2.7.0....* gnu/packages/xfce.scm (xfce4-diskperf-plugin): Update to 2.7.0. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Michael Rohleder
2022-04-15gnu: elementary-xfce-icon-theme: Update to 0.16....* gnu/packages/xfce.scm (elementary-xfce-icon-theme): Update to 0.16. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Michael Rohleder
2022-04-15gnu: xfce4-terminal: Update to 1.0.0....* gnu/packages/xfce.scm (xfce4-terminal): Update to 1.0.0. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Zhu Zihao
2022-04-15gnu: Add python-verspec....* gnu/packages/python.xyz.scm (python-verspec): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Vincent Prat
2022-04-15gnu: Add python-shtab....* gnu/packages/python-xyz.scm (python-shtab): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Vincent Prat
2022-04-15gnu: shepherd: Support cross-compilation....Reported by phodina <phodina@protonmail.com>. * gnu/packages/admin.scm (shepherd-0.9)[arguments]: New field. [native-inputs]: Add GUILE-FIBERS-1.1. Ludovic Courtès
2022-04-15gnu: mblaze: Offer contrib executables....* gnu/packages/mail.scm (mblaze)[outputs, inputs]: New fields. [arguments]: Add #:modules. Add 'install-contrib' phase. Signed-off-by: Ludovic Courtès <ludo@gnu.org> B. Wilson
2022-04-15gnu: streamlink: Update to 3.2.0....* gnu/packages/video.scm (streamlink): Update to 3.2.0. [inputs]: Add python-lxml and python-pycountry, remove python-iso3166 and python-iso639. [arguments]<#:phases>{check}: Use pytest. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Chadwain Holness
2022-04-15gnu: python-lxml: Add 4.7.1....* gnu/packages/xml.scm (python-lxml-4.7): New variable. Ludovic Courtès
2022-04-15gnu: cl-nfiles: Update to 0.4.0....* gnu/packages/lisp-xyz.scm (sbcl-nfiles): Update to 0.4.0. [inputs]: Add sbcl-quri. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> André A. Gomes
2022-04-15gnu: python-hmmlearn: Remove cythonized file....* gnu/packages/machine-learning.scm (python-hmmlearn)[source]: Add snippet to remove cythonized file. Efraim Flashner
2022-04-14gnu: python-aiohttp: Remove cythonized files....* gnu/packages/python-web.scm (python-aiohttp)[source]: Add snippet to remove cythonized files. Efraim Flashner
2022-04-14gnu: python-pywavelets: Remove cythonized files....* gnu/packages/python-xyz.scm (python-pywavelets)[source]: Add snippet to remove cythonized files. [native-inputs]: Add python-cython. Efraim Flashner
2022-04-14gnu: python-igraph: Update to 0.9.10....* gnu/packages/graph.scm (python-igraph): Update to 0.9.10. Efraim Flashner
2022-04-14gnu: igraph: Update to 0.9.8....* gnu/packages/graph.scm (igraph): Update to 0.9.8. Efraim Flashner
2022-04-14gnu: scregseg: Remove cythonized file....* gnu/packages/bioinformatics.scm (scregseg)[source]: Add snippet to remove cythonized file. Efraim Flashner
2022-04-14gnu: cl-py4cl: Update to 0.0.0-1.2f2a008....* gnu/packages/lisp-xyz.scm (sbcl-py4cl): Update to 0.0.0-1.2f2a008. [arguments]<#:phases>: Adjust substitutions to renamed files. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Paul A. Patience
2022-04-14gnu: Add emacs-org-modern....* gnu/packages/emacs-xyz.scm (emacs-org-modern): New variable. Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name> jgart
2022-04-14gnu: Add cl-numpy-file-format....* gnu/packages/lisp-xyz.scm (cl-numpy-file-format, ecl-numpy-file-format, sbcl-numpy-file-format): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Paul A. Patience
2022-04-14gnu: cl-who: Update to 1.1.4-3.07dafe9....* gnu/packages/lisp-xyz.scm (sbcl-cl-who): Update to 1.1.4-3.07dafe9. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Foo Chuan Wei
2022-04-14gnu: linux-libre 5.10: Update to 5.10.111....* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.111. (linux-libre-5.10-pristine-source): Update hash. Leo Famulari
2022-04-14gnu: linux-libre 5.15: Update to 5.15.34....* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.34. (linux-libre-5.15-pristine-source): Update hash. Leo Famulari
2022-04-14gnu: linux-libre: Update to 5.16.20....* gnu/packages/linux.scm (linux-libre-5.16-version): Update to 5.16.20. (linux-libre-5.16-pristine-source): Update hash. Leo Famulari
2022-04-14gnu: linux-libre 5.17: Update to 5.17.3....* gnu/packages/linux.scm (linux-libre-5.17-version): Update to 5.17.3. (linux-libre-5.17-pristine-source): Update hash. Leo Famulari
2022-04-14gnu: Update linux-libre 5.17 configuration files....This option that adds new hardware support appeared after the 5.17 release. * gnu/packages/aux-files/linux-libre/5.17-arm.conf, gnu/packages/aux-files/linux-libre/5.17-arm64.conf, gnu/packages/aux-files/linux-libre/5.17-i686.conf, gnu/packages/aux-files/linux-libre/5.17-x86_64.conf: Enable support for Realtek Ethernet switch chips. Leo Famulari
2022-04-14gnu: Add r-xcir....* gnu/packages/bioconductor.scm (r-xcir): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu
2022-04-14gnu: sundials: Remove input labels....* gnu/packages/maths.scm (sundials)[native-inputs, inputs]: Remove labels. (sundials-openmpi)[inputs]: Remove labels. Ludovic Courtès
2022-04-14gnu: sundials: Update to 6.1.1....* gnu/packages/maths.scm (sundials): Update to 6.1.1. [inputs]: Add PETSC. (sundials-openmpi)[inputs]: Remove PETSC. [arguments]: Remove now unnecessary flags. Change "MPI_ENABLE" to "ENABLE_MPI". Ludovic Courtès
2022-04-14gnu: guile-fibers@1.1: Support cross-compilation....Fixes <https://issues.guix.gnu.org/54793>. Reported by Mathieu Othacehe <othacehe@gnu.org>. * gnu/packages/guile-xyz.scm (guile-fibers-1.1)[arguments]: Add 'support-cross-compilation' phase. Ludovic Courtès
2022-04-14gnu: r-illuminahumanmethylation450kanno-ilmn12-hg19: Move to annotation section....* gnu/packages/bioconductor.scm (r-illuminahumanmethylation450kanno-ilmn12-hg19): Move this variable up to the annotation section. Ricardo Wurmus
2022-04-14gnu: r-snplocs-hsapiens-dbsnp144-grch37: Move to annotation section....* gnu/packages/bioconductor.scm (r-snplocs-hsapiens-dbsnp144-grch37): Move this variable up to the annotation section. Ricardo Wurmus
2022-04-14gnu: r-chromvarmotifs: Move to (gnu packages bioinformatics)....* gnu/packages/bioconductor.scm (r-chromvarmotifs): Move this variable from here... * gnu/packages/bioinformatics.scm (r-chromvarmotifs): ...to here. Ricardo Wurmus
2022-04-14gnu: r-absseq: Move out of experiments section....* gnu/packages/bioconductor.scm (r-absseq): Move definition out of experiments section. Ricardo Wurmus
2022-04-14gnu: r-abarray: Move out of experiments section....* gnu/packages/bioconductor.scm (r-abarray): Move definition out of experiments section. Ricardo Wurmus
2022-04-14gnu: r-aneufinder: Move to packages section....* gnu/packages/bioconductor.scm (r-aneufinder): Move this definition out of the section for Bioconductor experiments packages. Ricardo Wurmus
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