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2020-03-02gnu: debootstrap: Update to 1.0.119....* gnu/packages/debian.scm (debootstrap): Update to 1.0.119. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Vincent Legoll
2020-03-02gnu: vim: Update to 8.2.0343....* gnu/packages/vim.scm (vim): Update to 8.2.0343. Efraim Flashner
2020-03-01gnu: r-multiassayexperiment: Update to 1.12.3....* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.3. Ricardo Wurmus
2020-03-01gnu: r-cicero: Update to 1.4.2....* gnu/packages/bioconductor.scm (r-cicero): Update to 1.4.2. Ricardo Wurmus
2020-03-01gnu: r-mlinterfaces: Update to 1.66.4....* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.66.4. Ricardo Wurmus
2020-03-01gnu: r-biocneighbors: Update to 1.4.2....* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.4.2. Ricardo Wurmus
2020-03-01gnu: r-chippeakanno: Update to 3.20.1....* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.20.1. Ricardo Wurmus
2020-03-01gnu: r-hdf5array: Update to 1.14.3....* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.14.3. Ricardo Wurmus
2020-03-01gnu: r-rsamtools: Update to 2.2.3....* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 2.2.3. Ricardo Wurmus
2020-03-01gnu: r-edger: Update to 3.28.1....* gnu/packages/bioinformatics.scm (r-edger): Update to 3.28.1. Ricardo Wurmus
2020-03-01gnu: gwl: Update to 0.2.1....* gnu/packages/package-management.scm (gwl): Update to 0.2.1. [arguments]: Add phase "fix-tests". Ricardo Wurmus
2020-03-01gnu: r-nloptr: Update to 1.2.2....* gnu/packages/statistics.scm (r-nloptr): Update to 1.2.2. Ricardo Wurmus
2020-03-01gnu: r-gplots: Update to 3.0.3....* gnu/packages/statistics.scm (r-gplots): Update to 3.0.3. Ricardo Wurmus
2020-03-01gnu: r-mvtnorm: Update to 1.1-0....* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.1-0. Ricardo Wurmus
2020-03-01gnu: r-rlang: Update to 0.4.5....* gnu/packages/statistics.scm (r-rlang): Update to 0.4.5. Ricardo Wurmus
2020-03-01gnu: r-digest: Update to 0.6.25....* gnu/packages/statistics.scm (r-digest): Update to 0.6.25. Ricardo Wurmus
2020-03-01gnu: r-nnet: Update to 7.3-13....* gnu/packages/statistics.scm (r-nnet): Update to 7.3-13. Ricardo Wurmus
2020-03-01gnu: r-seurat: Update to 3.1.4....* gnu/packages/bioinformatics.scm (r-seurat): Update to 3.1.4. [propagated-inputs]: Add r-patchwork. Ricardo Wurmus
2020-03-01gnu: r-wgcna: Update to 1.69....* gnu/packages/cran.scm (r-wgcna): Update to 1.69. [propagated-inputs]: Remove r-robust. Ricardo Wurmus
2020-03-01gnu: r-quanteda: Update to 2.0.0....* gnu/packages/cran.scm (r-quanteda): Update to 2.0.0. [propagated-inputs]: Remove r-lubridate, r-rspectra, and r-spacyr; add r-jsonlite. Ricardo Wurmus
2020-03-01gnu: r-gdina: Update to 2.7.9....* gnu/packages/cran.scm (r-gdina): Update to 2.7.9. Ricardo Wurmus
2020-03-01gnu: r-subplex: Update to 1.6....* gnu/packages/cran.scm (r-subplex): Update to 1.6. Ricardo Wurmus
2020-03-01gnu: r-rpf: Update to 1.0.3....* gnu/packages/cran.scm (r-rpf): Update to 1.0.3. Ricardo Wurmus
2020-03-01gnu: r-dalex: Update to 1.0.1....* gnu/packages/cran.scm (r-dalex): Update to 1.0.1. Ricardo Wurmus
2020-03-01gnu: r-styler: Update to 1.3.2....* gnu/packages/cran.scm (r-styler): Update to 1.3.2. Ricardo Wurmus
2020-03-01gnu: r-gridgraphics: Update to 0.5-0....* gnu/packages/cran.scm (r-gridgraphics): Update to 0.5-0. Ricardo Wurmus
2020-03-01gnu: r-protviz: Update to 0.6.3....* gnu/packages/cran.scm (r-protviz): Update to 0.6.3. Ricardo Wurmus
2020-03-01gnu: r-rvcheck: Update to 0.1.8....* gnu/packages/cran.scm (r-rvcheck): Update to 0.1.8. Ricardo Wurmus
2020-03-01gnu: r-rcppannoy: Update to 0.0.15....* gnu/packages/cran.scm (r-rcppannoy): Update to 0.0.15. Ricardo Wurmus
2020-03-01gnu: r-mvabund: Update to 4.1.3....* gnu/packages/cran.scm (r-mvabund): Update to 4.1.3. Ricardo Wurmus
2020-03-01gnu: r-manipulatewidget: Update to 0.10.1....* gnu/packages/cran.scm (r-manipulatewidget): Update to 0.10.1. Ricardo Wurmus
2020-03-01gnu: r-effectsize: Update to 0.2.0....* gnu/packages/cran.scm (r-effectsize): Update to 0.2.0. Ricardo Wurmus
2020-03-01gnu: r-factominer: Update to 2.3....* gnu/packages/cran.scm (r-factominer): Update to 2.3. Ricardo Wurmus
2020-03-01gnu: r-tinytex: Update to 0.20....* gnu/packages/cran.scm (r-tinytex): Update to 0.20. Ricardo Wurmus
2020-03-01gnu: r-uuid: Update to 0.1-4....* gnu/packages/cran.scm (r-uuid): Update to 0.1-4. Ricardo Wurmus
2020-03-01gnu: r-broom: Update to 0.5.5....* gnu/packages/cran.scm (r-broom): Update to 0.5.5. Ricardo Wurmus
2020-03-01gnu: r-cli: Update to 2.0.2....* gnu/packages/cran.scm (r-cli): Update to 2.0.2. Ricardo Wurmus
2020-03-01gnu: r-sp: Update to 1.4-1....* gnu/packages/cran.scm (r-sp): Update to 1.4-1. Ricardo Wurmus
2020-03-01gnu: r-dendextend: Update to 1.13.4....* gnu/packages/cran.scm (r-dendextend): Update to 1.13.4. Ricardo Wurmus
2020-03-01gnu: r-modelr: Update to 0.1.6....* gnu/packages/cran.scm (r-modelr): Update to 0.1.6. [propagated-inputs]: Add r-tidyselect. Ricardo Wurmus
2020-03-01gnu: r-matrix-utils: Update to 0.9.8....* gnu/packages/cran.scm (r-matrix-utils): Update to 0.9.8. Ricardo Wurmus
2020-03-01gnu: r-gkmsvm: Update to 0.80.0....* gnu/packages/bioconductor.scm (r-gkmsvm): Update to 0.80.0. [propagated-inputs]: Remove r-biocgenerics, r-biostrings, r-genomeinfodb, r-iranges, r-rtracklayer, and r-s4vectors. Ricardo Wurmus
2020-03-01gnu: emacs-relint: Update to 1.14....* gnu/packages/emacs-xyz.scm (emacs-relint): Update to 1.14. Nicolas Goaziou
2020-03-01gnu: emacs-xr: Update to 1.16....* gnu/packages/emacs-xyz.scm (emacs-xr): Update to 1.16. Nicolas Goaziou
2020-03-01gnu: qemu-minimal-2.10: Use minimal dependencies from qemu-minimal....Without this patch qemu-minimal-2.10 is not really minimal; it depends on cups, ffmpeg, ghostscript, gstreamer, gtk, spice, ... * gnu/packages/virtualization.scm (qemu-minimal-2.10) [native-inputs]: Inherit from QEMU-MINIMAL instead of QEMU. [inputs]: Likewise. Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net> Jan Nieuwenhuizen
2020-03-01gnu: guile-squee: Fix the "guile3.0-squee" variant....* gnu/packages/guile-xyz.scm (guile3.0-squee): Switch inputs to native-inputs. Christopher Baines
2020-03-01gnu: guile-email: Add "guile3.0-email" variant....* gnu/packages/guile-xyz.scm (guile3.0-email): New variable. Christopher Baines
2020-03-01gnu: guile-squee: Add "guile3.0-squee" variant....* gnu/packages/guile-xyz.scm (guile3.0-squee): New variable. Christopher Baines
2020-03-01gnu: python-construct: Use HTTPS home page....* gnu/packages/python-xyz.scm (python-construct)[home-page]: Use HTTPS. Tobias Geerinckx-Rice
2020-03-01gnu: warzone2100: Use HTTPS home page....* gnu/packages/games.scm (warzone2100)[home-page]: Use HTTPS. Tobias Geerinckx-Rice