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2023-09-25gnu: guile-fibers: Remove version from latest package....As I think this makes more sense, the version is only specified when you need a specific previous release. * gnu/packages/guile-xyz.scm (guile-fibers): Rename to guile-fibers-1.0. (guile-fibers-1.3): Rename to guile-fibers. (guile-fibers-1.1): Inherit from guile-fibers. * gnu/packages/admin.scm (shepherd-0.10)[native-inputs]: Replace guile-fibers-1.3 with guile-fibers. * gnu/packages/ci.scm (cuirass)[inputs]: Likewise. * gnu/packages/gnunet.scm (gnunet-scheme)[propagated-inputs,native-inputs]: Likewise. * gnu/packages/package-management.scm (guix-build-coordinator) [inputs,propagated-inputs]: Likewise. * gnu/packages/package-management.scm (nar-herder)[inputs,propagated-inputs]: Likewise. * gnu/packages/web.scm (guix-data-service)[propagated-inputs]: Likewise. Christopher Baines
2023-09-24gnu: opencv: Add descriptors for xfeatures2d....* gnu/packages/image-processing.scm (opencv)[native-inputs]: Add boost and vgg descriptors. [arguments]: Place descriptor files in expected locations; do not disable xfeatures2d feature. Ricardo Wurmus
2023-09-24gnu: python-pygenometracks: Remove syntax error in setup.py....* gnu/packages/bioinformatics.scm (python-pygenometracks)[arguments]: Add phase remove-invalid-syntax. Mădălin Ionel Patrașcu
2023-09-24gnu: htslib: Link against htscodecs....* gnu/packages/bioinformatics.scm (htslib)[source]: Add snippet to remove bundled htscodecs. [arguments]: Add configure-flag to link against htscodecs. [propagated-inputs]: Add htscodecs. (htslib-1.14, htslib-1.12): Use bundled htscodecs. Efraim Flashner
2023-09-24gnu: htscodecs: Update to 1.5.1....* gnu/packages/bioinformatics.scm (htscodecs): Update to 1.5.1. Efraim Flashner
2023-09-24Merge branch 'emacs-team'Liliana Marie Prikler
2023-09-23Merge branch 'lisp-team'Guillaume Le Vaillant
2023-09-22gnu: tipp10: Update to 3.3.0....* gnu/packages/education.scm (tipp10): Update to 3.3.0. [source]: Use git-fetch. Drop obsolete patches. [build-system]: Use qt-build-system. [arguments]: Add #:qtbase. Remove #:phases. [inputs]: Replace qtbase-5 with qtbase, qtmultimedia-5 with qtmultimedia. [home-page]: Update home page. [license]: Add comment. * gnu/packages/patches/tipp10-disable-downloader.patch: Delete file. * gnu/packages/patches/tipp10-fix-compiling.patch: Likewise. * gnu/packages/patches/tipp10-qt5.patch: Likewise. * gnu/packages/patches/tipp10-remove-license-code.patch: Likewise. * gnu/local.mk (dist_patch_DATA): De-register them. Maxim Cournoyer
2023-09-22Merge branch 'master' into emacs-teamLiliana Marie Prikler
2023-09-22gnu: python-glcontext: Update to 2.4.0-1.0af21b7....* gnu/packages/python-xyz.scm (python-glcontext): Update to 2.4.0-1.0af21b7. Simon Tournier
2023-09-22gnu: python-glcontext: Update to 2.4.0-0.beebc1f....* gnu/packages/python-xyz.scm (python-glcontext): Explicitly refer to commit instead of mutable Git tag. Simon Tournier
2023-09-22gnu: bap: Update to 2.6.0-alpha-0.f995d28....* gnu/packages/ocaml.scm (bap): Update to 2.6.0-alpha-0.f995d28. Simon Tournier
2023-09-22gnu: bap: Update to 2.5.0-alpha-0.a972f8a....* gnu/packages/ocaml.scm (bap): Explicitly refer to commit instead of mutable Git tag. Simon Tournier
2023-09-22gnu: wfa2-lib: Mark package as tunable....* gnu/packages/bioinformatics.scm (wfa2-lib)[properties]: New field. Efraim Flashner
2023-09-17gnu: w3m: Remove input labels....* gnu/packages/w3m.scm (w3m)[native-inputs]: Remove input labels. Tobias Geerinckx-Rice
2023-09-17gnu: w3m: Add graphics support....This increases the closure by a whopping 0.1 MiB. * gnu/packages/w3m.scm (w3m)[arguments]: Add "-enable-image=fb,x11" to the #:configure-flags. Tobias Geerinckx-Rice
2023-09-21gnu: Add jbr@21-b240.22....* gnu/packages/java.scm (jbr21): New variable. Danny Milosavljevic
2023-09-21gnu: Add openjdk@21....* gnu/packages/java.scm (openjdk21): New variable. * gnu/packages/patches/openjdk-21-fix-rpath.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Danny Milosavljevic
2023-09-21gnu: Add openjdk@20....* gnu/packages/java.scm (openjdk20): New variable. Danny Milosavljevic
2023-09-22gnu: python-bwapy: Fix typo....* gnu/packages/bioinformatics.scm (python-bwapy)[synopsis]: Fix typo. Marius Bakke
2023-09-22gnu: python-arboreto: Add missing inputs....* gnu/packages/bioinformatics.scm (python-arboreto)[propagated-inputs]: Add PYTHON-LZ4 and PYTHON-PYARROW. Marius Bakke
2023-09-22gnu: python-duniterpy: Update to 1.1.1....* gnu/packages/finance.scm (python-duniterpy): Update to 1.1.1. [build-system]: Switch to PYPROJECT-BUILD-SYSTEM. [arguments]: Add more tweaks for hard coded version ranges. [native-inputs]: Add PYTHON-POETRY-CORE. Marius Bakke
2023-09-22gnu: python-libnacl: Update to 2.1.0....* gnu/packages/python-crypto.scm (python-libnacl): Update to 2.1.0. [build-system]: Switch to PYPROJECT-BUILD-SYSTEM. [arguments]: Adjust hack for locating libsodium. Add custom check phase. [native-inputs]: Remove PYTHON-PYHAMCREST. Add PYTHON-POETRY-CORE. Marius Bakke
2023-09-22gnu: python-sphinxcontrib-autoprogram: Update to 0.1.8....* gnu/packages/sphinx.scm (python-sphinxcontrib-autoprogram): Update to 0.1.8. [native-inputs]: Move PYTHON-SPHINX ... [propagated-inputs]: ... here. Marius Bakke
2023-09-22gnu: barectf: Update to 3.1.2....* gnu/packages/instrumentation.scm (barectf): Update to 3.1.2. [source]: Switch to GIT-FETCH. [build-system]: Change to PYPROJECT-BUILD-SYSTEM. [arguments]: Remove version pins. Set CC before building. [native-inputs]: Add PYTHON-POETRY-CORE and PYTHON-PYTEST. Remove GCC-TOOLCHAIN, GNU-MAKE, PYTHON-PYYAML-5, and PYTHON-TOX. Move PYTHON-JINJA2, PYTHON-JSONSCHEMA, and PYTHON-TERMCOLOR ... [propagated-inputs]: ... here. Add PYTHON-PYYAML. Marius Bakke
2023-09-22gnu: python-incremental: Update to 22.10.0....* gnu/packages/python-xyz.scm (python-incremental): Update to 22.10.0. Marius Bakke
2023-09-22gnu: python-txaio: Update to 23.1.1....* gnu/packages/python-xyz.scm (python-txaio): Update to 23.1.1. [build-system]: Change to PYPROJECT-BUILD-SYSTEM. [propagated-inputs]: Remove. [native-inputs]: Add PYTHON-PYTEST and PYTHON-TWISTED. Marius Bakke
2023-09-22gnu: python-hyperlink: Update to 21.0.0....* gnu/packages/python-web.scm (python-hyperlink): Update to 21.0.0. [build-system]: Change to PYPROJECT-BUILD-SYSTEM. [arguments]: New field. [native-inputs]: Add PYTHON-PYTEST. Marius Bakke
2023-09-22gnu: python-psycopg: Update to 3.1.10....* gnu/packages/databases.scm (python-psycopg): Update to 3.1.10. Marius Bakke
2023-09-22gnu: python-psycopg-pool: Update to 3.1.7....* gnu/packages/databases.scm (python-psycopg-pool): Update to 3.1.7. Marius Bakke
2023-09-22gnu: python-uvicorn: Update to 0.23.2....* gnu/packages/python-web.scm (python-uvicorn): Update to 0.23.2. [build-system]: Switch to PYPROJECT-BUILD-SYSTEM. [arguments]: Adjust accordingly. [native-inputs]: Add PYTHON-A2WSGI and PYTHON-HATCHLING. [propagated-inputs]: Remove PYTHON-ASGIREF. Marius Bakke
2023-09-22gnu: python-websockets: Update to 11.0.3....* gnu/packages/python-web.scm (python-websockets): Update to 11.0.3. Marius Bakke
2023-09-22gnu: python-cmarkgfm: Update to 2022.10.27....* gnu/packages/markup.scm (python-cmarkgfm): Update to 2022.10.27. [arguments]: Remove obsolete phase. Marius Bakke
2023-09-22gnu: python-cachetools: Update to 5.3.1....* gnu/packages/python-xyz.scm (python-cachetools): Update to 5.3.1. * gnu/packages/matrix.scm (python-matrix-nio)[arguments]: Add phase to loosen cachetools requirement. Marius Bakke
2023-09-22gnu: python-distlib: Don't reference the implicit bash input....* gnu/packages/python-xyz.scm (python-distlib)[inputs]: Add BASH-MINIMAL. [arguments]: Use SEARCH-INPUT-FILE instead of WHICH. Marius Bakke
2023-09-22gnu: python-distlib: Update to 0.3.7....* gnu/packages/python-xyz.scm (python-distlib): Update to 0.3.7. [build-system]: Switch to PYPROJECT-BUILD-SYSTEM. [arguments]: Remove redundant phases. [native-inputs]: Remove PYTHON-PYPA-BUILD. Marius Bakke
2023-09-22gnu: python-platformdirs: Update to 3.10.0....* gnu/packages/python-xyz.scm (python-platformdirs): Update to 3.10.0. [build-system]: Switch to PYPROJECT-BUILD-SYSTEM. [native-inputs]: Add PYTHON-HATCHLING and PYTHON-HATCH-VCS. Remove PYTHON-SETUPTOOLS-SCM. Marius Bakke
2023-09-22gnu: python-bleach: Update to 6.0.0....* gnu/packages/python-xyz.scm (python-bleach): Update to 6.0.0. [propagated-inputs]: Remove PYTHON-WEBENCODINGS. Marius Bakke
2023-09-22gnu: python-django@4: Update to 4.2.5....* gnu/packages/django.scm (python-django-4.0): Rename to ... (python-django-4.2): ... this. Update to 4.2.5. (python-django-3.2): Adjust inherits accordingly. Marius Bakke
2023-09-22gnu: python-asgiref: Update to 3.7.2....* gnu/packages/python-web.scm (python-asgiref): Update to 3.7.2. [native-inputs]: Add PYTHON-MYPY. [propagated-inputs]: Add PYTHON-TYPING-EXTENSIONS. Marius Bakke
2023-09-22gnu: python-django@3.2: Update to 3.2.21....* gnu/packages/django.scm (python-django-3.2): Update to 3.2.21. Marius Bakke
2023-09-22gnu: python-pytest-django: Update to 4.5.2....* gnu/packages/django.scm (python-pytest-django): Update to 4.5.2. [native-inputs]: Remove PYTHON-DJANGO and PYTHON-PYTEST-XDIST. Marius Bakke
2023-09-22gnu: python-pkginfo: Update to 1.9.6....* gnu/packages/python-xyz.scm (python-pkginfo): Update to 1.9.6. [build-system]: Switch to PYPROJECT-BUILD-SYSTEM. [native-inputs]: Remove PYTHON-WHEEL. Add PYTHON-PYTEST. Marius Bakke
2023-09-22gnu: python-daemon: Update to 3.0.1....* gnu/packages/python-xyz.scm (python-daemon): Update to 3.0.1. [arguments]: Skip two more tests. [propagated-inputs]: Add PYTHON-PACKAGING and PYTHON-SETUPTOOLS. [native-inputs]: Remove PYTHON-COVERAGE, PYTHON-TWINE, and PYTHON-MOCK. Marius Bakke
2023-09-22gnu: python-deprecated: Update to 1.2.14....* gnu/packages/python-xyz.scm (python-deprecated): Update to 1.2.14. Marius Bakke
2023-09-22gnu: python-flex: Update to 6.14.1....* gnu/packages/python-xyz.scm (python-flex): Update to 6.14.1. [propagated-inputs]: Remove PYTHON-ISO8601. Add PYTHON-STRICT-RFC3339. Marius Bakke
2023-09-22gnu: Remove python-django@2.2....This version is no longer maintained and contains known security flaws. * gnu/packages/django.scm (python-django-2.2): Remove variable. Marius Bakke
2023-09-22gnu: graphite-web: Update to 1.1.10....* gnu/packages/monitoring.scm (graphite-web): Update to 1.1.10. [arguments]: Relax Django requirement. [propagated-inputs]: Remove PYTHON-WHISPER , PYTHON-SCANDIR, and PYTHON-TXAMPQ. Replace PYTHON-DJANGO-2.2 with PYTHON-DJANGO-3.2. Marius Bakke
2023-09-22gnu: python-httpx: Update to 0.24.1....* gnu/packages/python-web.scm (python-httpx): Update to 0.24.1. Marius Bakke
2023-09-22gnu: websockify: Don't propagate inputs....* gnu/packages/web.scm (websockify)[propagated-inputs]: Move everything ... [inputs]: ... here. Marius Bakke
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