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2022-05-31gnu: guile-ac-d-bus: Run test suite.•••* gnu/packages/patches/guile-ac-d-bus-fix-tests.patch: New patch. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/guile-xyz.scm (guile-ac-d-bus) [source]: Apply patch. [phases]{check}: New phase. [native-inputs]: Add bash-minimal. Maxim Cournoyer
2022-05-31gnu: guile-ac-d-bus: Build and install info manual.•••* gnu/packages/guile-xyz.scm (guile-ac-d-bus) [arguments]: Use gexps. [phases]{build-doc, install-doc}: New phases. [native-inputs]: Add texinfo. Maxim Cournoyer
2022-05-31gnu: python-distributed: Update to 2022.05.2.•••* gnu/packages/python-science.scm (python-distributed): Update to 2022.05.2. [arguments]: Remove 'sanity-check phase; adjust 'check phase. [propagated-inputs]: Add python-urllib3. [native-inputs]: Add python-pytest-timeout and python-flaky. Ricardo Wurmus
2022-05-31gnu: r-haven: Fix build.•••* gnu/packages/cran.scm (r-haven)[arguments]: Adjust 'unbundle-readstat phase. Reported-by: Jonas Freimuth. Ricardo Wurmus
2022-05-31gnu: python-fsspec: Update to 2022.5.0.•••* gnu/packages/python-xyz.scm (python-fsspec): Update to 2022.5.0. Ricardo Wurmus
2022-05-31image: Add fat32 support.•••* gnu/build/image.scm (make-vfat-image): Pass fs-bits as an argument and force 1kb logical sector size only if "ESP" flag is set. (make-partition-image): Add "fat32" partition type, support explicit "fat16" type with vfat alias. * gnu/system/image.scm (partition->dos-type partition): Return file system IDs for "fat16" and "fat32" partitions. (partition->gpt-type partition): Ditto. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Pavel Shlyak
2022-05-31gnu: emacs-helpful: Update to 0.19•••* gnu/packages/patches/emacs-helpful-docstring-test.patch: New file. * gnu/packages/emacs-xyz.scm (emacs-helpful): Update to 0.19. [source]: Use the patch. * gnu/local.mk (dist_patch_DATA): Register the patch. Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com> yarl baudig
2022-05-30gnu: gandi.cli: Fix by downgrading python-click.•••* gnu/packages/python-xyz.scm (python-click-7): New variable. * gnu/packages/networking.scm (gandi.cli)[inputs]: Depend on python-click-7. Pierre Langlois
2022-05-30gnu: python-click@8: Remove redundant package.•••The python-click package is already version 8. * gnu/packages/python-xyz.scm (python-click-8): Remove variable. (python-proselint)[propagated-inputs]: Depend on python-click. Pierre Langlois
2022-05-30gnu: python-scanpy: Update to 1.9.1.•••* gnu/packages/bioinformatics.scm (python-scanpy): Update to 1.9.1. [arguments]: Add phase 'set-numba-cache-dir; disable more broken tests. [propagated-inputs]: Add python-dask and python-session-info; replace python-louvain-0.7 with python-louvain. Ricardo Wurmus
2022-05-30gnu: python-leidenalg: Update to 0.8.10.•••* gnu/packages/graph.scm (python-leidenalg): Update to 0.8.10. [arguments]: Patch setup.py. [native-inputs]: Remove python-setuptools; add python-setuptools-scm. Ricardo Wurmus
2022-05-30gnu: python-dask: Update to 2022.05.2.•••* gnu/packages/python-xyz.scm (python-dask): Update to 2022.05.2. Ricardo Wurmus
2022-05-30gnu: Add python-session-info.•••* gnu/packages/python-xyz.scm (python-session-info): New variable. Ricardo Wurmus
2022-05-30gnu: non-sequencer: Update to 1.9.5-5.257ec59.•••* gnu/packages/music.scm (non-sequencer): Update to 1.9.5-5.257ec59. [source]: Use fork as old repository is defunct; use git-file-name and git-version. [arguments]: Remove python-2; add phase to replace bundled waf. [native-inputs]: Add python-waf. (non-session-manager)[native-inputs]: Add python-waf. (non-mixer)[inputs]: Add lv2 and lilv. [native-inputs]: Add python-waf. (non-timeline)[native-inputs]: Add python-waf. Ricardo Wurmus
2022-05-30gnu: quodlibet: Correct wrappers.•••* gnu/packages/music.scm (quodlibet)[#:phases]: Rename ‘wrap-gi-typelib’ to ‘wrap-extra-paths’. Use ‘=’ for GI_TYPELIB_PATH. Add ‘GST_PLUGIN_SYSTEM_PATH’ with suffix binding. Liliana Marie Prikler
2022-05-30gnu: calceph: Add 'release-monitoring-url' property.•••* gnu/packages/astronomy.scm (calceph)[properties]: New field. Ludovic Courtès
2022-05-30gnu: Add calceph.•••* gnu/packages/astronomy.scm (calceph): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Sharlatan Hellseher
2022-05-30gnu: emacs-vterm: Update to 0.0.1-1.b447235.•••* gnu/packages/emacs-xyz.scm (emacs-vterm): Update to 0.0.1-1.b447235. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Kyle Meyer
2022-05-30gnu: rspamd: Update to 3.2•••* gnu/packages/mail.scm (rspamd): Update to 3.2 I also added a new build option, that changes the LOCAL_CONFDIR variable to /etc/rspamd. This allows for rspamd configuration via the /etc/rspamd/local.d and override.d directories, which by default were located in the PREFIX which is in /gnu/store. Signed-off-by: Ludovic Courtès <ludo@gnu.org> ykonai
2022-05-30gnu: pre-commit: Update to 2.19.0.•••* gnu/packages/version-control.scm (pre-commit): Update to 2.19.0. Signed-off-by: Ludovic Courtès <ludo@gnu.org> jgart
2022-05-30gnu: xpad: Update to 5.8.0.•••* gnu/packages/gnome.scm (xpad): Update to 5.8.0. [inputs]: Replace gtksourceview-3 with gtksourceview. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Rene Saavedra
2022-05-30gnu: casync: Update to 99559cd1.•••* gnu/packages/sync.scm (casync): Update to 99559cd1. [source]: Remove patch. [arguments]: Fix installation. [native-inputs]: Add python. [inputs]: Add eudev. * gnu/packages/patches/casync-renameat2-declaration.patch: Delete file. * gnu/local.mk: Remove it. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2022-05-30gnu: rsync: Update to 3.2.4.•••* gnu/packages/rsync.scm (rsync): Update to 3.2.4. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2022-05-30gnu: GCC: Add cross environment variables patch to GCC 12.•••* gnu/packages/patches/gcc-12-cross-environment-variables.patch : New file. * gnu/local.mk (dist_patch_DATA): Add gcc-12-cross-environment-variables.patch. * gnu/packages/cross-base.scm (cross-gcc)[source](patches): Apply the patch. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Morgan Smith
2022-05-30gnu: emacs-w3m: Update to 20220508.2259.•••* gnu/packages/emacs-xyz.scm (emacs-w3m): Update to 20220508.2259. [source]: Switch to 'git-fetch'. Ludovic Courtès
2022-05-30gnu: tor: Record the file name of 'torsocks' in 'torify'.•••* gnu/packages/tor.scm (tor)[arguments]: Add 'adjust-torify' phase. [inputs]: Add TORSOCKS. Ludovic Courtès
2022-05-30gnu: r-lmom: Update to 2.9.•••* gnu/packages/statistics.scm (r-lmom): Update to 2.9. Ricardo Wurmus
2022-05-30gnu: r-chron: Update to 2.3-57.•••* gnu/packages/statistics.scm (r-chron): Update to 2.3-57. Ricardo Wurmus
2022-05-30gnu: r-tree: Update to 1.0-42.•••* gnu/packages/cran.scm (r-tree): Update to 1.0-42. Ricardo Wurmus
2022-05-30gnu: r-parameters: Update to 0.18.1.•••* gnu/packages/cran.scm (r-parameters): Update to 0.18.1. Ricardo Wurmus
2022-05-30gnu: r-clue: Update to 0.3-61.•••* gnu/packages/cran.scm (r-clue): Update to 0.3-61. Ricardo Wurmus
2022-05-30gnu: r-cobs: Update to 1.3-5.•••* gnu/packages/cran.scm (r-cobs): Update to 1.3-5. Ricardo Wurmus
2022-05-30gnu: r-gee: Update to 4.13-23.•••* gnu/packages/cran.scm (r-gee): Update to 4.13-23. Ricardo Wurmus
2022-05-30gnu: r-qpdf: Update to 1.2.0.•••* gnu/packages/cran.scm (r-qpdf): Update to 1.2.0. [source]: Remove trailing #T from snippet. [arguments]: Remove trailing #T from 'configure phase. [inputs]: Add libjpeg-turbo. Ricardo Wurmus
2022-05-30gnu: r-batchelor: Update to 1.12.1.•••* gnu/packages/bioconductor.scm (r-batchelor): Update to 1.12.1. Ricardo Wurmus
2022-05-30gnu: gcc-9: Update to 9.5.0.•••* gnu/packages/gcc.scm (gcc-9): Update to 9.5.0. Efraim Flashner
2022-05-30gnu: hello: Update to 2.12.1.•••* gnu/packages/base.scm (hello): Update to 2.12.1. Efraim Flashner
2022-05-30gnu: nss: Skip tests on riscv64-linux.•••* gnu/packages/nss.scm (nss)[arguments]: Skip tests when building for riscv64-linux. Efraim Flashner
2022-05-30gnu: nss: Adjust make-flags for riscv64-linux.•••* gnu/packages/nss.scm (nss)[arguments]: When building for riscv64-linux don't build the binaries with gtest. Efraim Flashner
2022-05-30gnu: Add rust-serde-regex-1.•••* gnu/packages/crates-io.scm (rust-serde-regex-1): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Evgenii Lepikhin
2022-05-30gnu: rust-nom-7: Update to 7.1.1.•••* gnu/packages/crates-io.scm (rust-nom-7): Update to 7.1.1. [arguments]: In cargo-inputs replace rust-minimal-lexical-0.1 with 0.2. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Evgenii Lepikhin
2022-05-30gnu: Add rust-minimal-lexical-0.2.•••* gnu/packages/crates-io.scm (rust-minimal-lexical-0.2): New variable. (rust-minimal-lexical-0.1): Inherit from rust-minimal-lexical-0.2. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Evgenii Lepikhin
2022-05-30gnu: Add rust-located-yaml-0.2.•••* gnu/packages/crates-io.scm (rust-located-yaml-0.2) New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Evgenii Lepikhin
2022-05-30gnu: Add rust-pretty-0.11.•••* gnu/packages/crates-io.scm (rust-pretty-0.11) New variable. (rust-pretty-0.5): Inherit from rust-pretty-0.11. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Evgenii Lepikhin
2022-05-30gnu: Add rust-nom-locate-4.•••* gnu/packages/crates-io.scm (rust-nom-locate-4): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Evgenii Lepikhin
2022-05-30gnu: virtuoso-ose: Register patch.•••This is a follow-up to 48efbde7a944acfe4fc944bf27bfa9ff82592024. * gnu/local.mk (dist_patch_DATA): Register patch. Efraim Flashner
2022-05-30gnu: yt-dlp: Remove trailing #t.•••* gnu/packages/video.scm (yt-dlp)[source]: Remove trailing #t from snippet. [arguments]: Remove trailing #t from phases. Efraim Flashner
2022-05-30gnu: yt-dlp: Update to 2022.05.18.•••* gnu/packages/video.scm (yt-dlp): Update to 2022.05.18. [inputs]: Add python-brotli and python-certifi. Efraim Flashner
2022-05-30gnu: links: Update to 2.27.•••* gnu/packages/web-browsers.scm (links): Update to 2.27. Efraim Flashner
2022-05-30gnu: virtuoso-ose: Update to 7.2.7.•••* gnu/packages/databases.scm (virtuoso-ose): Update to 7.2.7; Run autogen after applying the patch below. * gnu/packages/patches/virtuoso-ose-remove-pre-built-jar-files.patch: New file. Roel Janssen