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2020-05-28gnu: Add r-brms....* gnu/packages/cran.scm (r-brms): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> Eric Brown
2020-05-28gnu: Add exfatprogs....* gnu/packages/file-systems.scm (exfatprogs): New public variable. Signed-off-by: Leo Famulari <leo@famulari.name> Tobias Geerinckx-Rice
2020-05-28gnu: Add shiru-lv2....* gnu/packages/music.scm (shiru-lv2): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> Alexandros Theodotou
2020-05-28gnu: Add compiledb....* gnu/packages/build-tools.scm (compiledb): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> Yuval Kogman
2020-05-28gnu: Add python-bashlex....* gnu/packages/python-xyz.scm (python-bashlex): New variable. Signed-off-by: Leo Famulari <leo@famulari.name> Yuval Kogman
2020-05-28gnu: Add guile-jsonld....* gnu/packages/guile-xyz.scm (guile-jsonld): New variable. Julien Lepiller
2020-05-28gnu: Transmission: Fix CVE-2018-10756....* gnu/packages/patches/transmission-CVE-2018-10756.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/bittorrent.scm (transmission)[source]: Use it. Leo Famulari
2020-05-28gnu: python-netcdf4: Update to 1.5.3...* gnu/packages/python-xyz.scm (python-netcdf4): Update to 1.5.3. Signed-off-by: Leo Famulari <leo@famulari.name> Josh Holland
2020-05-28gnu: clang: Build 'clang-tools-extra'....* gnu/packages/llvm.scm (clang-from-llvm): Add #:tools-extra. Add 'output' field. In 'inputs', add TOOLS-EXTRA when it's given. In 'arguments', add 'add-tools-extra' and 'move-extra-tools' phases when TOOLS-EXTRA is given. Ludovic Courtès
2020-05-28gnu: python-flask-sqlalchemy: Update to 2.4.2....* gnu/packages/python-web.scm (python-flask-sqlalchemy): Update to 2.4.2. Tobias Geerinckx-Rice
2020-05-27gnu: apfs-fuse: Update to 0.0.0-1.7b89418....* gnu/packages/file-systems.scm (apfs-fuse): Update to 0.0.0-1.7b89418. [arguments]: Install the README. Select FUSE 2 in #:configure-flags. Leo Famulari
2020-05-28gnu: r-rversions: Update to 2.0.2....* gnu/packages/statistics.scm (r-rversions): Update to 2.0.2. Tobias Geerinckx-Rice
2020-05-28gnu: cvs-fast-export: Update to 1.55....* gnu/packages/version-control.scm (cvs-fast-export): Update to 1.55. Tobias Geerinckx-Rice
2020-05-28gnu: eid-mw: Update to 4.4.27....* gnu/packages/security-token.scm (eid-mw): Update to 4.4.27. Tobias Geerinckx-Rice
2020-05-28gnu: mu: Update to 1.4.7....* gnu/packages/mail.scm (mu): Update to 1.4.7. Tobias Geerinckx-Rice
2020-05-28gnu: gnome: Add gnome-boxes....* gnu/packages/gnome.scm (gnome)[propagated-inputs]: Add gnome-boxes. Tobias Geerinckx-Rice
2020-05-28gnu: gnome-boxes: Update to 3.36.4....* gnu/packages/gnome.scm (gnome-boxes): Update to 3.36.4. Tobias Geerinckx-Rice
2020-05-28gnu: gdb: Add version 9.2....* gnu/packages/gdb.scm (gdb-9.2): New variable. Ludovic Courtès
2020-05-28system: hurd: Remove custom <manifest> gexp compiler....This is superseded by <profile>, which was added in ef674a24c527eaf54801707d34dbf5d12ec139cb. * gnu/system/hurd.scm (compile-manifest): Remove. (cross-hurd-image)[system-profile]: Define using 'profile'. Ludovic Courtès
2020-05-27gnu: libnslog: Use latest version of check for tests....Test failures with latest check were fixed in most recent release. See bug report: https://bugs.netsurf-browser.org/mantis/view.php?id=2736 * gnu/packages/web.scm (libnslog)[native-inputs]: Use latest check. Eric Bavier
2020-05-27gnu: linux-libre: Update to 5.4.43....* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.43. (linux-libre-5.4-pristine-source): Update hash. Mark H Weaver
2020-05-27gnu: linux-libre@5.6: Update to 5.6.15....* gnu/packages/linux.scm (linux-libre-5.6-version): Update to 5.6.15. (linux-libre-5.6-pristine-source): Update hash. Mark H Weaver
2020-05-27gnu: linux-libre@4.19: Update to 4.19.125....* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.125. (linux-libre-4.19-pristine-source): Update hash. Mark H Weaver
2020-05-27gnu: linux-libre@4.14: Update to 4.14.182....* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.182. (linux-libre-4.14-pristine-source): Update hash. Mark H Weaver
2020-05-27gnu: linux-libre@4.9: Update to 4.9.225....* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.225. (linux-libre-4.9-pristine-source): Update hash. Mark H Weaver
2020-05-27gnu: linux-libre@4.4: Update to 4.4.225....* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.225. (linux-libre-4.4-pristine-source): Update hash. Mark H Weaver
2020-05-27gnu: jucipp: Update to 1.6.0....* gnu/packages/text-editors.scm (jucipp): Update to 1.6.0. [arguments]: Remove obsolete phase. [inputs]: Add UNIVERSAL-CTAGS. Marius Bakke
2020-05-27gnu: Add Universal Ctags....* gnu/packages/code.scm (universal-ctags): New public variable. Marius Bakke
2020-05-27gnu: Add packcc....* gnu/packages/c.scm (packcc): New public variable. Marius Bakke
2020-05-27gnu: code.scm: Sort module imports....* gnu/packages/code.scm (define-module): Sort imports. Marius Bakke
2020-05-27gnu: Add facter....* gnu/packages/admin.scm (facter): New public variable. Marius Bakke
2020-05-27gnu: ruby-thor: Update to 1.0.1....* gnu/packages/ruby.scm (ruby-thor): Update to 1.0.1. [source]: Switch to GIT-FETCH. [arguments]: Remove #:tests?. Add #:phases. [native-inputs]: Remove BUNDLER. Add RUBY-RSPEC and RUBY-SIMPLECOV. Marius Bakke
2020-05-27gnu: Add ruby-sys-filesystem....* gnu/packages/ruby.scm (ruby-sys-filesystem): New public variable. Marius Bakke
2020-05-27gnu: Add ruby-mkmf-lite....* gnu/packages/ruby.scm (ruby-mkmf-lite): New public variable. Marius Bakke
2020-05-27gnu: Add ruby-ptools....* gnu/packages/ruby.scm (ruby-ptools): New public variable. Marius Bakke
2020-05-27gnu: hdf4: Provide an absolute reference to libjpeg....* gnu/packages/maths.scm (hdf4)[arguments]: Add phase 'provide-absolute-libjpeg-reference'. Marius Bakke
2020-05-27Revert some Go package updates....This reverts commit 5f833e0495f00a72f8d34a63e8afbc531afdd22d through 681ac9a66c26d2c739e41f03228f8c63fc0df482. It's not idiomatic to update Go packages independently of their users. This reversion was approved by Efraim on #guix: http://logs.guix.gnu.org/guix/2020-05-26.log * gnu/packages/golang.scm, gnu/packages/syncthing.scm, gnu/packages/tls.scm: Revert. Leo Famulari
2020-05-27gnu: emacs-forge: Update to commit 09bf8ad....* gnu/packages/emacs-xyz.scm (emacs-forge): Update to 09bf8ad. [native-inputs]: Remove emacs-minimal, which is implicitly provided by the emacs-build-system. Maxim Cournoyer
2020-05-27gnu: emacs-transient: Update to commit a6e4cced....This is necessary to build a recent version of emacs-forge. * gnu/packages/emacs-xyz.scm (emacs-transient): Update to commit a6e4cced. [build-system]: Switch to the emacs-build-system. [arguments]: Remove the #:modules, #:imported-modules and #:make-flags arguments. [phases]{configure}: Do not delete. {install}: Do not replace. {build-info-manual}: New phase. {enter-lisp-directory}: New phase. [native-inputs]: Remove emacs-minimal, which is implicitly provided by the emacs-build-system. Maxim Cournoyer
2020-05-27gnu: emacs-evil-magit: Update to commit 253c644....This resolves tests failures that appeared with the update to emacs-magit. * gnu/packages/emacs-xyz.scm (emacs-evil-magit): Update to commit 253c644. Maxim Cournoyer
2020-05-27gnu: emacs-magit: Update to commit d05545e....* gnu/packages/emacs-xyz.scm (emacs-magit): Update to commit 68b5a13fa1b6b122d4a2547b8c415aadff83d8ca. [origin]: Remove obsoleted patches and snippets. [build-system]: Switch to the emacs-build-system. [arguments]: Remove the #:modules and #:imported-modules arguments. Enable tests. Remove the #:make-flags and #:test-target argument. Specify the \#:test-command argument. [phases]{patch}: Remove phase. {build-info-manual, set-magit-version, configure-git} {disable-tramp-test}: New phases. {configure}: Do not delete phase. {patch-exec-paths}: Adapt file names. * gnu/packages/patches/emacs-magit-log-format-author-margin.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Unregister it. Maxim Cournoyer
2020-05-27gnu: Add emacs-libgit....* gnu/packages/emacs-xyz.scm (emacs-libgit): New variable. * gnu/packages/patches/emacs-libgit-use-system-libgit2.patch: New file. * gnu/local.mk (dist_patch_DATA): Register patch. Maxim Cournoyer
2020-05-27gnu: Add guile-rdf....* gnu/packages/guile-xyz.scm (guile-rdf): New variable. Julien Lepiller
2020-05-27gnu: knot: Update to 2.9.5....* gnu/packages/dns.scm (knot): Update to 2.9.5. Tobias Geerinckx-Rice
2020-05-27gnu: fossil: Update to 2.11....* gnu/packages/version-control.scm (fossil): Update to 2.11. Tobias Geerinckx-Rice
2020-05-27gnu: wimlib: Update to 1.13.2....* gnu/packages/backup.scm (wimlib): Update to 1.13.2. Tobias Geerinckx-Rice
2020-05-27gnu: nginx-documentation: Update to 1.19.0-2549-c13a55aae487....* gnu/packages/web.scm (nginx-documentation): Update to 1.19.0-2549-c13a55aae487. Tobias Geerinckx-Rice
2020-05-27gnu: nginx: Update to 1.19.0....* gnu/packages/web.scm (nginx): Update to 1.19.0. Tobias Geerinckx-Rice
2020-05-27gnu: nnn: Update to 3.2....* gnu/packages/admin.scm (nnn): Update to 3.2. Tobias Geerinckx-Rice
2020-05-27gnu: yoshimi: Update to 1.7.0.1-0.bfcadc6 to fix build....* gnu/packages/music.scm (yoshimi): Update to 1.7.0.1-0.bfcadc6. [source]: Use GIT-FETCH for now. Tobias Geerinckx-Rice
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