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2020-06-13guix: Update to Bioconductor 3.11....* guix/build-system/r.scm (bioconductor-uri): Use new URL. * guix/import/cran.scm (%bioconductor-version): Update to 3.11. Ricardo Wurmus
2020-06-02build-system: linux-module: Allow passing #:make-flags argument....* guix/build-system/linux-module.scm (linux-module-build): Add #:make-flags. (linux-module-build-cross): Add #:make-flags. * guix/build/linux-module-build-system.scm (install): Pass make-flags. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org> Danny Milosavljevic
2020-05-21build: asdf-build-system: Use SBCL source in CL packages....* guix/build/asdf-build-system.scm (copy-files-to-output): Don't attempt to reset timestamps on files without write access. (install): When parent SBCL package is in the inputs, use its source. This way we get possibly patched sources in CL packages as well (e.g. for FFI). This is also useful for sources that generate files on load-op, like cl-unicode. * guix/build-system/asdf.scm (package-with-build-system): Forward the SBCL parent as a native input so that it can be used in the above install phase. Pierre Neidhardt
2020-05-18build-system/guile: Expose #:scheme-file-regexp....* guix/build-system/guile.scm (%scheme-file-regexp): New variable. (guile-build): Accept #:scheme-file-regexp and pass it on to builder. Alex Sassmannshausen
2020-03-30Merge branch 'master' into core-updates... Conflicts: gnu/packages/admin.scm gnu/packages/commencement.scm gnu/packages/guile.scm gnu/packages/linux.scm gnu/packages/package-management.scm gnu/packages/pulseaudio.scm gnu/packages/web.scm Marius Bakke
2020-03-29build-system/gnu: Optimize the package graph....With this change, the output of: guix graph -e '(@@ (gnu packages commencement) coreutils-final)' |grep 'label = ' | wc -l drops from 76 nodes to 68 nodes, and the "add-data-to-store-cache" hit rate for: guix build libreoffice -d --no-grafts drops from 3.9% to 2.6%. * guix/build-system/gnu.scm (package-with-explicit-inputs*)[cut?]: Adjust condition to exclude packages with build systems other than GNU-BUILD-SYSTEM, such as 'ld-wrapper-boot3'. Ludovic Courtès
2020-03-27Merge branch 'master' into core-updates... Conflicts: gnu/packages/icu4c.scm gnu/packages/man.scm gnu/packages/python-xyz.scm guix/scripts/environment.scm guix/scripts/pack.scm guix/scripts/package.scm guix/scripts/pull.scm guix/store.scm Marius Bakke
2020-03-22build-system: linux-module: Fix cross compilation....* guix/build-system/linux-module.scm (default-kmod, default-gcc): Delete procedures. (system->arch): New procedure. (make-linux-module-builder)[native-inputs]: Move linux... [inputs]: ...to here. (linux-module-build-cross): New procedure. (linux-module-build): Add TARGET. Pass TARGET and ARCH to build side. (lower): Allow cross-compilation. Move "linux" and "linux-module-builder" to host-inputs. Add target-inputs. Call linux-module-build-cross if TARGET is set, linux-module-build otherwise. * guix/build/linux-module-build-system.scm (configure): Add ARCH argument. (linux-module-build): Adjust comment. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org> Mathieu Othacehe
2020-03-18Merge branch 'master' into core-updatesMarius Bakke
2020-03-17build-system: linux-module: Break some long lines....* gnu/build/linux-modules.scm (make-linux-module-builder, lower): Break some long commentary lines. Mathieu Othacehe
2020-03-04Merge branch 'master' into core-updatesMarius Bakke
2020-02-24build-system: Fix copy-build-system default install plan....* guix/build-system/copy.scm (copy-build): Set install-plan default value to copy everything from source to the output. Pierre Neidhardt
2020-02-21build-system: Add copy-build-system....* guix/build-system/copy.scm: New file. * guix/build/copy-build-system.scm: New file. * Makefile.am (MODULES): Add them. * doc/guix.texi (Build Systems): Document 'copy-build-system'. Pierre Neidhardt
2020-02-12gnu: cross-base: Switch back to 'CROSS_C_INCLUDE_PATH' & co....This is a followup to 2073b55e6b964cb8ca15e8c74cb32dac00f05f0d. * gnu/build/cross-toolchain.scm (%gcc-include-paths): Switch back to 'C_INCLUDE_PATH' & co. * gnu/packages/cross-base.scm (%gcc-include-paths): Likewise. (cross-gcc-arguments): Remove 'treat-glibc-as-system-header' phase. (cross-gcc)[native-inputs]: Reorder so that libc comes last. [search-paths]: Add "include/c++" for 'CROSS_CPLUS_INCLUDE_PATH'. * guix/build-system/gnu.scm (standard-cross-packages): Have "cross-gcc" appear both for 'host and 'target. Ludovic Courtès
2020-02-06gnu: gcc: Switch back to using 'C_INCLUDE_PATH' instead of 'CPATH'....Fixes <https://bugs.gnu.org/30756>. Initially reported by Julien Lepiller <julien@lepiller.eu>. * gnu/packages/base.scm (make-gcc-libc): Remove 'treat-glibc-as-system-header' phase from 'arguments'. * gnu/packages/commencement.scm (gcc-final): Likewise. * gnu/packages/gcc.scm (gcc-4.7)[arguments]: Add "include/c++" to 'CPLUS_INCLUDE_PATH'. (gcc-6)[native-search-paths]: Remove. * gnu/packages/make-bootstrap.scm (gcc-for-bootstrap): Remove 'native-search-paths' and 'arguments'. * gnu/packages/patches/python-2.7-search-paths.patch, gnu/packages/patches/python-3-search-paths.patch: Replace "CPATH" with "C_INCLUDE_PATH". * guix/build-system/cmake.scm (lower): When not cross-compiling, move INPUTS from the 'host-inputs' field to the 'build-inputs' field of the bag, right after NATIVE-INPUTS. * guix/build-system/glib-or-gtk.scm (lower): Likewise. * guix/build-system/gnu.scm (lower): Likewise. * guix/build-system/meson.scm (lower): Likewise. Ludovic Courtès
2020-02-03Merge branch 'staging' into core-updatesMarius Bakke
2020-01-27guix: ocaml: Also replace dune when relevant in package-with-explicit-ocaml....* guix/build-system/ocaml.scm (package-with-explicit-ocaml): Take a dune argument and add it to transformed packages when relevant. Julien Lepiller
2020-01-26build-system/cmake: Enable parallel tests by default....* guix/build-system/cmake.scm (cmake-build, cmake-cross-build): Set the PARALLEL-TESTS? key to #t. Marius Bakke
2020-01-23Merge branch 'staging' into core-updatesMarius Bakke
2020-01-22guix: ocaml: Reuse package-with-ocaml4.01 with ocaml-4.07....* guix/build-system/guix.scm (package-with-ocaml4.01) (strip-ocaml4.01-variant): Rename to... (package-with-ocaml4.07, strip-ocaml4.07-variant): ... this and rename internal implementation. Julien Lepiller
2020-01-14build-system/texlive: Update to texlive-2019.3, revision 51265....* guix/build-system/texlive.scm (%texlive-tag): Change to "2019.3". (%texlive-revision): Change to 51265. Marius Bakke
2020-01-11Merge branch 'master' into core-updatesMarius Bakke
2020-01-08build-system/clojure: Provide only the right modules in scope....Previously, we used to have a whole bunch of (guix build *-build-system) modules in scope, which, for example, meant that '%standard-phases' was clashing. This change clarifies it. * guix/build-system/clojure.scm (%default-modules): New variable. (clojure-build): Change the default value of #:modules and that of #:phases. Ludovic Courtès
2020-01-04build-system/guile: Add #:implicit-inputs?....* guix/build-system/guile.scm (lower): Add implicit-inputs? keyword parameter. [private-keywords]: Add it. Honor it. Jan Nieuwenhuizen
2020-01-03gnu: uglify-js: Move back next to sbcl-cl-uglify-js definition....This fixes the bug which prevented uglify-js from being defined properly, and cascaded back to all Common Lisp packages. * gnu/packages/bioinformatics.scm: Replace javascript module with lisp-xyz. * gnu/packages/cran.scm: Use lisp-xyz module. * gnu/packages/javascript.scm (uglify-js): Move from here... * gnu/packages/lisp-xyz.scm: ... To here. * gnu/packages/web.scm: Replace javascript module with lisp-xyz. * guix/build-system/minify.scm: Find uglify-js in the lisp-xyz module. Pierre Neidhardt
2019-12-31Merge remote-tracking branch 'master' into core-updates.Mathieu Othacehe
2019-12-26build-system: linux-module: Add substitutable keyword....* guix/build-system/linux-module.scm (linux-module-build) Add substitutable keyword. Efraim Flashner
2019-12-23build-system: qt: Adjust indentation....* guix/build-system/qt.scm (qt-build, qt-cross-build): Adjust indentation. Hartmut Goebel
2019-12-23build-system: qt: Actually use qt-build-system, not cmake-build-system....When the qt-build-system was created, based on the cmake-build-system, some references to cmake have been missed to be changed. * guix/build-system/qt.scm (qt-build, qt-cross-build)[modules]: Use qt-build-system, not cmake-build-system. [builder]: Call qt-build, not cmake-build. Coauthored-by: Ludovic Courtès <ludo@gnu.org> Hartmut Goebel
2019-12-15guix: Upgrade to Bioconductor 3.10....* guix/build-system/r.scm (bioconductor-uri): Switch to version 3.10. * guix/import/cran.scm (%bioconductor-version): Same. Ricardo Wurmus
2019-12-05Merge branch 'master' into core-updatesMarius Bakke
2019-12-05gnu: Really move lisp libraries to lisp-xyz, uglify-js to javascript and stum......* gnu/local.mk: Include lisp-xyz.scm. * gnu/packages/lisp-xyz.scm: New file. * gnu/packages/lisp.scm: Move all lisp libraries to lisp-xyz.scm, uglify-js to javascript.scm and stumpwm to wm.scm. * gnu/packages/javascript.scm: Add uglify-js. * gnu/packages/wm.scm: Add stumpwm. * gnu/packages/bioinformatics.scm: Find uglify-js in javascript.scm. * gnu/packages/machine-learning.scm: Depend on lisp-xyz.scm instead of lisp.scm. * gnu/packages/web.scm: Find uglify-js in javascript.scm. * gnu/packages/web-browsers.scm: Depend on lisp-xyz.scm instead of lisp.scm. * guix/build-system/minify.scm (default-uglify-js): Find uglify-js in javascript module instead of lisp. Pierre Neidhardt
2019-12-05Revert "gnu: Properly move lisp libraries to lisp-xyz, uglify-js to javascrip......This reverts commit ac1ee30f4f7f9d0ae2a655676b0e8b9eb90a35dd, which still breaks ‘guix pull’. Tobias Geerinckx-Rice
2019-12-05Revert "build-system/linux-module: Accept a #:make-flags keyword."...I should've tested this better before pushing the commit. This reverts commit fabd4900d8fb739a55e2dff76dee3a29b2a90bb1. Efraim Flashner
2019-12-05gnu: Properly move lisp libraries to lisp-xyz, uglify-js to javascript and st......* gnu/local.mk: Include lisp-xyz.scm. * gnu/packages/lisp-xyz.scm: New file. * gnu/packages/lisp.scm: Move all lisp libraries to lisp-xyz.scm, uglify-js to javascript.scm and stumpwm to wm.scm. * gnu/packages/javascript.scm: Add uglify-js. * gnu/packages/wm.scm: Add stumpwm. * gnu/packages/bioinformatics.scm: Find uglify-js in javascript.scm. * gnu/packages/machine-learning.scm: Depend on lisp-xyz.scm instead of lisp.scm. * gnu/packages/web.scm: Find uglify-js in javascript.scm. * gnu/packages/web-browsers.scm: Depend on lisp-xyz.scm instead of lisp.scm. * guix/build-system/minify.scm (default-uglify-js): Find uglify-js in javascript module instead of lisp. Pierre Neidhardt
2019-12-04build-system/linux-module: Accept a #:make-flags keyword....Fixes bug#37882. * guix/build-system/linux-module.scm (linux-module-build): Accept a MAKE-FLAGS argument. <builder>: Pass it on. Tobias Geerinckx-Rice
2019-12-01guix: Add the 'qt' build system....* guix/build-system/qt.scm, guix/build/qt-build-system.scm: New files. * Makefile.am (MODULES): Add them. * doc/guix.texi (Buiild systems): Add the new build system. Hartmut Goebel
2019-11-16Merge remote-tracking branch master into core-updatesMathieu Othacehe
2019-11-15gnu: cmake: Fix cross-compilation....* gnu/packages/cmake.scm (cmake-minimal-cross): New package. * guix/build-system/cmake.scm (default-cmake): Add new target argument and use it to select cmake-minimal or cmake-minimal-cross. (lower): Pass target to default-cmake. Mathieu Othacehe
2019-10-18build-system/asdf: Fix package transform....* guix/build-system/asdf.scm (package-with-build-system): [find-input-package]: New function. [rewrite]: Use it. Guillaume Le Vaillant
2019-10-14build-system/gnu: 'package-with-explicit-inputs' uses 'package-mapping'....* guix/build-system/gnu.scm (package-with-explicit-inputs): Rename to... (package-with-explicit-inputs/deprecated): ... this. (package-with-explicit-inputs*): New procedure. (package-with-explicit-inputs): Define as a 'case-lambda*'. Ludovic Courtès
2019-10-11gnu: Add nsis-x86_64 and nsis-i686....* guix/build-system/scons.scm (scons-build): Add build-targets and install-targets parameters. * guix/build/scons-build-system.scm (build, install): Adjust accordingly. * doc/guix.texi (Build Systems): Document it. * gnu/packages/installers.scm: New file, (make-nsis): New procedure, (nsis-x86_64, nsis-i686): New variables. * gnu/packages/patches/nsis-env-passthru.patch: New file. * gnu/local.mk (dist_patch_DATA, GNU_SYSTEM_MODULES): Adjust accordingly. Carl Dong
2019-09-06Merge branch 'master' into core-updatesMark H Weaver
2019-09-05build-system/julia: Avoid module cycles....* guix/build-system/julia.scm: Remove unused imports. (lower)[julia]: Default to (DEFAULT-JULIA). Marius Bakke
2019-09-04build-system/julia: Fix syntax error....* guix/build-system/julia.scm: Fix invalid module reference. Ricardo Wurmus
2019-09-04build: Add julia-build-system....* guix/build/julia-build-system.scm: New file. * guix/build-system/julia.scm: New file. * Makefile.am (MODULES): Add them. * doc/guix.texi (Build Systems): Document julia-build-system. Signed-off-by: Julien Lepiller <julien@lepiller.eu> nixo
2019-09-04import: crate: Separate crates.io API from actual conversion....This provides a clean separation between bindings to the https://crates.io/api/v1 API and actual conversion to Guix package sexps. As a side-effect, it fixes things like "guix import blake2-rfc", "guix refresh -t crates", etc. * guix/import/crate.scm (<crate>, <crate-version>, <crate-dependency>): New record types. (lookup-crate, crate-version-dependencies): New procedures. (crate-fetch): Remove. (crate->guix-package): Rewrite to use the new API. (latest-release): Likewise. * guix/build-system/cargo.scm (%crate-base-url): New variable. * tests/crate.scm (test-crate): Update accordingly. fixlet Ludovic Courtès
2019-08-22Merge branch 'master' into core-updatesMark H Weaver
2019-08-16build-system/r: bioconductor-uri: Take optional package type....* guix/build-system/r.scm (bioconductor-uri): Take optional TYPE argument to return annotation or experiment URLs. Ricardo Wurmus
2019-08-13Merge branch 'master' into core-updatesMarius Bakke