| Age | Commit message (Expand) | Author |
|---|
| 2017-10-24 | build-system/go: Parameterize installing the source code....* guix/build-system/go.scm (go-build): Add install-source? key.
* guix/build/go-build-system.scm (install-source): Check if
install-source? is true.
| Leo Famulari |
| 2017-10-21 | Use HTTPS for bioconductor.org....* doc/guix.texi (Invoking guix import, Invoking guix refresh): Use HTTPS for
bioconductor.org URLs.
* gnu/packages/bioinformatics.scm (r-annotate, r-geneplotter, r-genefilter)
(r-deseq2, r-dexseq, r-annotationforge, r-rbgl, r-gseabase, r-category)
(r-gostats, r-shortread, r-biocgenerics, r-biocinstaller, r-biocviews)
(r-biocstyle, r-bioccheck, r-s4vectors, r-iranges, r-genomeinfodbdata)
(r-genomeinfodb, r-xvector, r-genomicranges, r-biobase, r-annotationdbi)
(r-biomart, r-biocparallel, r-biostrings, r-rsamtools, r-delayedarray)
(r-summarizedexperiment, r-genomicalignments, r-rtracklayer)
(r-genomicfeatures, r-graph, r-topgo, r-bsgenome, r-impute, r-seqpattern)
(r-seqlogo, r-motifrg, r-bamsignals, r-mutationalpatterns, r-tximport)
(r-rhdf5, r-chipseq, r-sva, r-affy, r-vsn, r-mzid, r-msnid)
(r-interactivedisplaybase, r-annotationhub)[home-page]: Likewise.
* gnu/packages/bioinformatics.scm (r-txdb-hsapiens-ucsc-hg19-knowngene)
(r-go-db, r-bsgenome-hsapiens-1000genomes-hs37d5, r-org-hs-eg-db)
(r-org-ce-eg-db, r-org-dm-eg-db, r-org-mm-eg-db)
(r-bsgenome-hsapiens-ucsc-hg19, r-bsgenome-mmusculus-ucsc-mm9)
(r-bsgenome-mmusculus-ucsc-mm10, r-txdb-mmusculus-ucsc-mm10-knowngene)
(r-bsgenome-celegans-ucsc-ce6, r-bsgenome-celegans-ucsc-ce10)
(r-bsgenome-dmelanogaster-ucsc-dm3, r-copyhelper)[source, home-page]:
Likewise.
* gnu/packages/statistics.scm (r-rcurl)[source]: Likewise.
* guix/build-system/r.scm (bioconductor-uri): Likewise.
* guix/import/cran.scm (%cran-url, bioconductor-package?)
(bioconductor-data-package?, bioconductor-experiment-package?): Likewise.
| Tobias Geerinckx-Rice |
| 2017-10-12 | build: Add the Go build system....* guix/build-system/go.scm,
guix/build/go-build-system.scm: New files.
* Makefile.am (MODULES): Add new files.
* doc/guix.texi (Build Systems): Document the go-build-system.
| Leo Famulari |
| 2017-10-03 | guix: ant-build-system: Add #:test-include and #:test-exclude arguments....* guix/build-system/ant.scm: Add #:test-include and #:test-exclude
arguments.
* guix/build/ant-build-system.scm: Generate test list from arguments.
* doc/guix.texi (Build Systems): Document it.
| Julien Lepiller |
| 2017-10-03 | guix: ant-build-system: Add main-class support....* guix/build-system/ant.scm: New #:main-class argument
* guix/build/ant-build-system.scm: Generate a manifest file with
additional properties.
* doc/guix.texi (Build Systems): Document it.
| Julien Lepiller |
| 2017-09-26 | build-system: meson: Fix typo in variable name....* guix/build-system/meson.scm (lower): fix typo in glib-or-gtk?.
| Mohammed Sadiq |
| 2017-09-16 | build-system: Add 'meson-build-system'....* Makefile.am (MODULES): Add 'guix/build-system/meson.scm' and
'guix/build/meson-build-system.scm'.
* guix/build-system/meson.scm: New file.
* guix/build/meson-build-system.scm: New file.
* doc/guix.texi (Build Systems): Add 'meson-build-system'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Peter Mikkelsen |
| 2017-08-06 | Merge branch 'master' into core-updates | Mark H Weaver |
| 2017-08-04 | build: Add minify build system....* guix/build-system/minify.scm: New file.
* guix/build/minify-build-system: New file.
* Makefile.am (MODULES): Add new files.
* doc/guix.texi (Build Systems): Document minify-build-system.
| Ricardo Wurmus |
| 2017-07-10 | Merge branch 'master' into core-updates | Leo Famulari |
| 2017-07-09 | build-system: texlive: Build union in configure phase....This allows us to use texmf.cnf instead of having to set all required
environment variables manually.
* guix/build/texlive-build-system.scm (configure): New procedure.
(build): Simplify.
(%standard-phases): Add configure phase.
* guix/build-system/texlive.scm (texlive-build): Include (guix build union) in
modules.
(%texlive-build-system-modules): Likewise.
| Ricardo Wurmus |
| 2017-06-26 | Merge branch 'master' into core-updates | Mark H Weaver |
| 2017-06-20 | gnu: Move contents of zip module into compression module....* gnu/packages/zip.scm (zip, unzip, zziplib, perl-zip): Move to...
* gnu/packages/compression.scm: ...here.
* gnu/packages/zip.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Unregister deleted file.
* po/packages/POTFILES.in: Unregister deleted file.
* gnu/packages/{audio, avr, bioinformatics, busybox, cdrom, ci, compression,
docbook, documentation, fonts, fpga, game-development, games, gl, gnome,
gnuzilla, graphics, guile, haskell, image, java, kodi, ldc, libreoffice,
markup, maths, mc, monitoring, music, php, pretty-print, python, scheme,
smalltalk, statistics, synergy, tex, textutils, video, web-browsers, xml,
zip}.scm, guix/build-system/{ant, font}.scm, guix/{download, packages}.scm:
Adapt module import.
| Arun Isaac |
| 2017-06-20 | Merge branch 'master' into core-updates | Mark H Weaver |
| 2017-06-19 | build-system/texlive: Update to texlive-2017.1, revision 44591....* guix/build-system/texlive.scm (%texlive-tag): Change to texlive-2017.1.
(%texlive-revision): Change to 44591.
| Ricardo Wurmus |
| 2017-06-18 | Merge branch 'master' into core-updates | Mark H Weaver |
| 2017-06-15 | build-system: Add 'texlive-build-system'....* guix/build-system/texlive.scm: New file.
* guix/build/texlive-build-system.scm: New file.
* Makefile.am (MODULES): Add them.
* doc/guix.texi (Build Systems): Document it.
* gnu/packages/tex.scm (%texlive-tag, %texlive-revision): Remove variables.
(texlife-ref): Remove procedure.
| Ricardo Wurmus |
| 2017-06-10 | Merge branch 'master' into core-updates | Marius Bakke |
| 2017-06-08 | build-system: emacs: Factorize include/exclude default arguments....The `install' phase of the emacs-build-system contained default arguments
duplicated from the host side `emacs-build' procedure. This change factorizes
them so that:
1. They are not duplicated.
2. They can be reused and extended easily when defining emacs packages.
* guix/build/emacs-build-system.scm (%default-include, %default-exclude): New
variables.
(install): Use %default-include and %default-exclude as default arguments.
* guix/build-system/emacs.scm: Use and re-export %default-include,
%default-exclude from (guix build emacs-build-system).
(emacs-build): Use %default-include and %default-exclude as default arguments.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
| Maxim Cournoyer |
| 2017-06-03 | Merge branch 'master' into core-updates... Conflicts:
gnu/packages/image.scm
(incorporated libtiff graft)
| Marius Bakke |
| 2017-05-30 | build-system/cmake: Add support for cross compilation....Fixes <https://bugs.gnu.org/26897>.
* guix/build-system/gnu.scm: Export standard-cross-packages.
* guix/build-system/cmake.scm (cmake-cross-build): New procedure.
(lower): Add support for cross-builds.
* guix/build/cmake-build-system.scm (configure): Handle "target" argument.
| Ricardo Wurmus |
| 2017-05-28 | build-system: Add 'font-build-system'....* Makefile.am (MODULES): Add 'guix/build-system/font.scm' and
'guix/build/font-build-system.scm'.
* guix/build-system/font.scm: New file.
* guix/build/font-build-system.scm: New file.
* doc/guix.texi (Build Systems): Add 'font-build-system'.
| Arun Isaac |
| 2017-05-25 | build-system: gnu: Fix cross-gcc call....This is a follow-up to 7b3318e34f4e2743254a88b908859901db960e9a.
* guix/build-system/gnu.scm (standard-cross-packages): Use keyword arguments
in cross-gcc call.
| Ricardo Wurmus |
| 2017-05-23 | build-system: emacs: Install only a subset of files....* guix/build/emacs-build-system.scm (install): Install files matching
#:include while excluding files matching #:exclude.
* guix/build-system/emacs.scm (emacs-build): Add keyword arguments #:include
and #:exclude.
| Arun Isaac |
| 2017-05-16 | build-system/asdf: Handle tests defined in external systems....* guix/build-system/asdf.scm (asdf-build): Add a #:test-asd-file argument.
[builder]: Pass it to the build system.
(package-with-build-system)[transform]: Strip it from source systems' arguments.
* guix/build/asdf-build-system.scm (check): Pass the fully qualified path to
it on to the test-system procedure.
* guix/build/lisp-utils.scm (test-system): Load the file, or otherwise one of
the often used names for it, before running the tests. Adjust the docstring
accordingly.
| Andy Patterson |
| 2017-05-16 | build-system/asdf: Always pre-load the system's definition file....* guix/build-system/asdf.scm (asdf-build)[builder]: Pass a default
`#:asd-file' argument to the build procedure, using the system's name.
* guix/build/asdf-build-system.scm (build, check): Adjust to assume that
`asd-file' will always be a string.
* guix/build/lisp-utils.scm (compile-system, system-dependencies)
(test-system): Likewise.
| Andy Patterson |
| 2017-05-16 | build-system/asdf: Pass the system name as an argument to the builder....* guix/build-system/asdf.scm (asdf-build): Use the user-defined system name,
or calculate it from the package's full name.
[builder]: Pass the value along to the build procedure.
(package-with-build-system): Remove #:asd-system-name from source packages'
arguments.
* guix/build/asdf-build-system.scm: Adjust accordingly.
* guix/build/lisp-utils.scm (remove-lisp-from-name): Delete variable.
| Andy Patterson |
| 2017-05-16 | build-system/asdf: Parameterize the lisp type and implementation globally....* guix/build-system/asdf.scm (asdf-build)[builder]: Parameterize %lisp-type
and %lisp before invoking the build procedure. Don't pass #:lisp-type as an
argument to said procedure.
* guix/build/asdf-build-system.scm: Adjust accordingly.
(source-install-prefix): Rename to %lisp-source-install-prefix.
* guix/build/lisp-utils.scm: Adjust accordingly.
(%lisp-type): New parameter.
(bundle-install-prefix): Rename to %bundle-install-prefix.
* gnu/packages/lisp.scm: Adjust accordingly.
| Andy Patterson |
| 2017-05-16 | build-system/asdf: Make #:lisp a package argument....* guix/build-system/asdf.scm (lower): Change argument name to `lisp-type'.
(asdf-build): Change argument name to `lisp-type'. Remove `lisp' as an
argument to the returned procedure. Change the argument passed to build
phases to `lisp-type'.
* guix/build/asdf-build-system.scm (copy-source, build, check)
(create-asd-file, symlink-asd-files, cleanup-files, strip): Respect
`lisp-type` argument.
* gnu/packages/lisp.scm (sbcl-stumpwm, sbcl-stumpwm+slynk): Likewise.
| Andy Patterson |
| 2017-05-16 | build-system/asdf: Don't rename inputs....* guix/build-system/asdf.scm (package-with-build-system)[transform]: Use updated
`new-inputs' procedure for inputs and native-inputs.
<rewrite>: Don't rename inputs.
<new-propagated-inputs>: Draw from package-inputs and package-native-inputs
for source packages. Use the original package's propagated-inputs otherwise.
<new-inputs>: Convert into a function to be used to transform inputs and
native-inputs.
* gnu/packages/lisp.scm (sbcl-fiveam, sbcl-bordeaux-threads)
(sbcl-flexi-streams, sbcl-cl-ppcre, sbcl-stumpwm, sbcl-slynk-arglists)
(sbcl-slynk-fancy-inspector): Don't prefix input names.
| Andy Patterson |
| 2017-05-16 | build-system/asdf: Use asdf to determine dependencies....This removes the need for conventions to determine which inputs are run-time
dependencies, and also the need to specify "special" dependencies.
* guix/build/lisp-utils.scm (patch-asd-file, lisp-dependencies)
(wrap-perform-method): Remove them.
(inputs->asd-file-map, system-dependencies, generate-system-definition)
(generate-dependency-links, make-asd-file): New procedures.
(lisp-eval-program): Add an error if no lisp matches.
(compile-system): Don't use asdf's in-built asd-file generator.
| Andy Patterson |
| 2017-05-10 | build-system: Add package-with-ocaml4.01....* guix/build-system/ocaml.scm (default-ocaml4.01, default-ocaml4.01-findlib,
package-with-explicit-ocaml, package-with-ocaml4.01,
strip-ocaml4.01-variant): New variables.
| Ben Woodcroft |
| 2017-05-10 | guix: Add java-utils....* guix/build/java-utils.scm: New file.
* guix/build-system/ant.scm: Use it.
* Makefile.am (MODULES): Add it.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
| Hartmut Goebel |
| 2017-05-10 | ant-build-system: Add default "check" target....* guix/build-system/ant.scm (ant-build): Change default test target to
"check"; add "test-dir" argument.
* guix/build/ant-build-system.scm (default-build.xml): Add "test-dir"
argument; add ant targets "compile-tests" and "check".
(configure): Add "test-dir" argument; pass it to "default-build.xml".
| Ricardo Wurmus |
| 2017-05-10 | ant-build-system: Allow specifying source directory....* guix/build-system/ant.scm (ant-build),
guix/build/ant-build-system.scm (default-build.xml): Add parameter
source-dir.
* guix/build/ant-build-system.scm (configure): Pass source-dir on to
default-build.xml.
* doc/guix.texi (Build Systems): Document it.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
| Hartmut Goebel |
| 2017-04-05 | build-system/python: 'package-with-explicit-python' uses 'package-mapping'....* guix/build-system/python.scm (package-with-explicit-python)
[package-variant, cut?]: New procedures.
[transform]: Remove 'mlambdaq' form and input tuple handling.
Use 'package-mapping'.
| Ludovic Courtès |
| 2017-03-17 | build-system/cargo (cargo-build): Add cargo-build-flags, remove configure-flags....* guix/build-system/cargo.scm (cargo-build): Add cargo-build-flags,
remove configure-flags.
| Danny Milosavljevic |
| 2017-03-17 | gnu: r: Rename to r-minimal....* gnu/packages/statistics.scm (r): Rename to...
(r-minimal): ...this new variable.
(r-with-recommended-packages): Rename to...
(r): ...this.
* guix/build-system/r.scm (default-r): Reference r-minimal.
* gnu/packages/emacs.scm (emacs-ess)[inputs],
gnu/packages/machine-learning.scm (shogun)[inputs],
gnu/packages/python.scm (python-rpy2)[inputs],
gnu/packages/bioinformatics.scm (ribotaper)[inputs],
(couger)[propagated-inputs],
(roary)[inputs],
(rsem)[inputs],
(rcas-web)[inputs]: Change "r" to "r-minimal".
| Ricardo Wurmus |
| 2017-03-03 | build-system/cargo: Export %cargo-build-system-modules....* guix/build-system/cargo.scm (%cargo-build-system-modules): Export.
| Danny Milosavljevic |
| 2017-02-10 | gnu: Add dub-build-system....* guix/build-system/dub.scm: New file.
* guix/build/dub-build-system.scm: New file.
* Makefile.am (MODULES): Add them.
* doc/guix.texi: Add section for dub-build-system.
| Danny Milosavljevic |
| 2017-01-28 | build-system/python: 'package-with-explicit-python' uses 'eq?' memoization....* guix/build-system/python.scm (package-with-explicit-python): Use
'mlambdaq' instead of 'mlambda'. This does not change the <package>
graph and has no visible impact on performance.
| Ludovic Courtès |
| 2017-01-28 | Use 'mlambda' instead of 'memoize'....* gnu/packages.scm (find-newest-available-packages): Use 'mlambda'
instead of (memoize (lambda ...) ...).
* gnu/packages/bootstrap.scm (package-with-bootstrap-guile): Likewise.
* guix/build-system/gnu.scm (package-with-explicit-inputs)[rewritten-input]:
Likewise.
* guix/build-system/python.scm (package-with-explicit-python)[transform]:
Likewise.
* guix/derivations.scm (derivation->string): Likewise.
* guix/gnu-maintenance.scm (gnu-package?): Likewise.
* guix/modules.scm (module-file-dependencies): Likewise.
* guix/scripts/graph.scm (standard-package-set): Likewise.
* guix/scripts/lint.scm (official-gnu-packages*): Likewise.
* guix/store.scm (store-regexp*): Likewise.
* guix/utils.scm (location): Likewise.
| Ludovic Courtès |
| 2017-01-28 | Add (guix memoization)....* guix/combinators.scm (memoize): Remove.
* guix/memoization.scm: New file.
* Makefile.am (MODULES): Add it.
* gnu/packages.scm, gnu/packages/bootstrap.scm,
guix/build-system/gnu.scm, guix/build-system/python.scm,
guix/derivations.scm, guix/gnu-maintenance.scm,
guix/import/cran.scm, guix/import/elpa.scm,
guix/modules.scm, guix/scripts/build.scm,
guix/scripts/graph.scm, guix/scripts/lint.scm,
guix/store.scm, guix/utils.scm: Adjust imports accordingly.
| Ludovic Courtès |
| 2017-01-04 | gnu: Add ocaml-build-system....* guix/build/ocaml-build-system.scm: New file.
* guix/build-system/ocaml.scm: New file.
* Makefile.am (MODULES): Add them.
* gnu/packages/ocaml.scm (ocaml)[native-search-paths]: Adjuste OCAMLPATH.
Signed-off-by: David Craven <david@craven.ch>
| Julien Lepiller |
| 2017-01-04 | build-system: cargo: Use correct cargo....* gnu/packages/rust.scm (cargo-bootstrap): Make private.
* guix/build-system/cargo.scm (default-cargo): Use cargo.
| David Craven |
| 2017-01-01 | build-system: cargo: Handle Cargo.lock file not present....* guix/build-system/cargo.scm (cargo-build): Add src output.
(private-keywords): Add #:outputs.
* guix/build/cargo-build-system.scm (configure): Use /share/rust-source
when replacing inputs.
(build, check): Don't do anything when there isn't a Cargo.lock file
present.
(install): Install sources to src output. When a Cargo.lock file is
present use cargo install to install binaries to out.
* guix/import/crate.scm (make-crate-sexp): Importer uses the src output
for crate inputs by default.
* guix/import/utils.scm (package-names->package-inputs, maybe-inputs,
maybe-native-inputs): Take an optional output argument.
* tests/crate.scm (crate->guix-package test): Update.
Problem reported by Francisco Gómez García <espectalll@kydara.com>.
| David Craven |
| 2016-12-14 | build-system: Add cargo build system....* guix/build-system/cargo.scm: New file.
* guix/build/cargo-build-system.scm: New file.
* Makefile.am (MODULES): Add files.
| David Craven |
| 2016-11-15 | guix: python-build-system: Add option "#:use-setuptools?" (default true)....* guix/build-system/python.scm (python-build): New keyword argument
"#:use-setuptools?", defaulting to #t.
* guix/build/python-build-system.scm (call-setup-py): New positional
parameter "use-setuptools?". If false, do not use the shim-wrapper
for addin setuptools. (build, check): accept keyword-
parameter, and pass to call-setuppy. (install): same; if
"use-setuptools?" is false, do not use options "--root" and
"--single-version-externally-managed" for setup.py.
* doc/guix.texi (Build Systems): Document it.
| Hartmut Goebel |
| 2016-10-08 | build-system: Add asdf-build-system....* guix/build-system/asdf.scm: New file.
* guix/build/asdf-build-system.scm: New file.
* guix/build/lisp-utils.scm: New file.
* Makefile.am (MODULES): Add them.
* doc/guix.texi (Build Systems): Document 'asdf-build-system'.
Signed-off-by: 宋文武 <iyzsong@gmail.com>
| Andy Patterson |
| 2016-09-27 | Add missing exports....Reported by Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com>
at <https://lists.gnu.org/archive/html/guix-devel/2016-09/msg01686.html>.
* gnu/system/file-systems.scm (%tty-gid): Export.
* guix/build-system/python.scm (default-python, default-python2):
Export.
| Ludovic Courtès |
