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2022-05-24profiles: 'manifest->gexp' emits 'properties' field only when needed....Partly fixes <https://issues.guix.gnu.org/55499>. Reported by Ricardo Wurmus <rekado@elephly.net>. For a profile built with: guix install r-seurat r-cistopic r-monocle3 r-cicero-monocle3 this reduces the size of the 'manifest' file from 6.4M to 5.6M (12%). * guix/profiles.scm (manifest->gexp)[entry->gexp]: When PROPERTIES is empty, do not emit a 'properties' field. Ludovic Courtès
2022-03-22profiles: manual-database: Remove GDBM workaround....* guix/profiles.scm (manual-database): No longer set the MALLOC_PERTURB_ environment variable. Maxim Cournoyer
2022-02-18profiles: 'profile-derivation' rejects unsupported packages....Previously user-facing commands would happily start building packages even if they do not support that system. With this change, all the user-facing commands reject unsupported packages without going further. * guix/profiles.scm (profile-derivation): Add #:allow-unsupported-packages?. Define 'check-supported-packages' and honor #:allow-unsupported-packages?. * tests/guix-pack.sh, tests/guix-package.sh, tests/guix-shell.sh: Ensure that unsupported packages are rejected. * tests/guix-system.sh: Pass "--system=armhf-linux" when attempting to build gnu/system/examples/asus-c201.tmpl. Ludovic Courtès
2022-02-14profiles: texlive-font-maps: Create ls-R file....* guix/profiles.scm (texlive-font-maps): Run mktexlsr on resulting tree to provide ls-R file. Ricardo Wurmus
2022-02-07guix: Restore profile hook for TeX Live font maps....Long ago we had a profile hook, called “texlive-configuration”, which would operate on the texlive-* packages that have actually been installed in the profile, build a union directory, and then install a texmf.cnf file that declared the prefix of the TeX Live tree to be the union directory. It then generated font maps based on the fonts that had actually been installed. This approach had multiple disadvantages, the worst of which was that you could only really have one TeX Live tree. Commit 04a0b1e09abce99857e7930336421ca6d15ae630 addressed this, where texmf.cnf was modified *once* and for all in texlive-bin to reference the GUIX_TEXMF variable to determine the root of the tree. This made much of “texlive-configuration” obsolete, because we didn’t need to have any union directories at all, because we had no need for a customized per-profile variant of texmf.cnf. Unfortunately, with the loss of the profile hook we would no longer build font maps. This patch resurrects the profile hook: we’re again generating font maps (such as pdftex.map) based on the contents of the profile. * gnu/packages/tex.scm (texlive-default-updmap.cfg): New variable. * guix/profiles.scm (texlive-configuration): Rename this... (texlive-font-maps): ...to this; update to run updmap-sys on the contents of the profile to generate only font maps. (%default-profile-hooks): Add texlive-font-maps. * guix/status.scm (hook-message): Rename unused texlive-configuration to texlive-font-maps. Ricardo Wurmus
2022-02-02guix system: 'describe' shows the running system, not the current one....* guix/profiles.scm (generation-number): Add optional 'base-profile' parameter and use it. * guix/scripts/system.scm (process-command): Add "/run/current-system" as first argument to 'generation-number'. * doc/guix.texi (Invoking guix system): Clarify that 'guix system describe' shows the running system. Ludovic Courtès
2021-11-25profiles: Also handle package objects in GDK-PIXBUF-LOADERS-CACHE-FILE....* guix/profiles.scm (gdk-pixbuf-loaders-cache-file): Handle both a string or a package object for GDK-PIXBUF, as these are the two types that can be returned by MANIFEST-LOOKUP-PACKAGE. Suggested-by: Ludovic Courtès <ludo@gnu.org> Maxim Cournoyer
2021-11-25profiles: Fix the gdk-pixbuf-loaders-cache-file hook....'guix install' would otherwise fail with a wrong type argument whet attempting to call the hook. * guix/profiles.scm (gdk-pixbuf-loaders-cache-file) <file-append>: Replace with... <string-append>: ... this, as gdk-pixbuf has already been expanded to a string at this point. Maxim Cournoyer
2021-11-11profiles: Add a gdk-pixbuf-loaders-cache-file hook....This paves the way toward properly fixing https://issues.guix.gnu.org/50957. * guix/profiles.scm (gdk-pixbuf-loaders-cache-file): Add procedure... (%default-profile-hooks): ... and register it as a profile hook. * guix/status.scm (hook-message): Register it here too. Maxim Cournoyer
2021-11-08Merge remote-tracking branch 'origin/master' into core-updates-frozenEfraim Flashner
2021-11-06profiles: Build the man database only if 'man-db' is in the profile....This allows us to skip the expensive man-db profile hook in most cases. Suggested by Liliana Marie Prikler <liliana.prikler@gmail.com>. * guix/profiles.scm (manual-database/optional): New procedure. (%default-profile-hooks): Use it instead of 'manual-database'. * doc/guix.texi (Documentation): Add footnote about 'man -k' database creation. Ludovic Courtès
2021-10-31Merge remote-tracking branch 'origin/master' into core-updates-frozenEfraim Flashner
2021-10-25profiles: Add 'package->development-manifest'....* guix/profiles.scm (package->development-manifest): New procedure. * guix/scripts/environment.scm (input->manifest-entry) (package-environment-inputs): Remove. * guix/scripts/environment.scm (options/resolve-packages): Use 'package->development-manifest' instead of 'package-environment-inputs'. * tests/profiles.scm ("package->development-manifest"): New test. Ludovic Courtès
2021-07-18Merge branch 'master' into core-updatesLudovic Courtès
2021-06-28guix: Delete duplicates from emacs-load-path....It has been reported in IRC, that directories may show up multiple times in subdirs.el, probably a result of propagation. This can for instance be seen by ‘guix environment --ad-hoc emacs emacs-guix’, which will generate multiple references to dash. With this patch only one reference per package is generated. * guix/profiles.scm (emacs-subdirs): wrap subdirs added to ‘normal-top-level-add-to-load-path’ in ‘delete-duplictes’. Leo Prikler
2021-06-19Merge branch 'master' into core-updates...Note: this merge actually changes the 'curl' and 'python-attrs' derivations, as part of solving caf4a7a2770ef4d05a6e18f40d602e51da749ddc and 12964df69a99de6190422c752fef65ef813f3b6b respectively. 4604d43c0e (gnu: gnutls@3.6.16: Fix cross-compilation.) was ignored because it cannot currently be tested. Conflicts: gnu/local.mk gnu/packages/aidc.scm gnu/packages/boost.scm gnu/packages/curl.scm gnu/packages/nettle.scm gnu/packages/networking.scm gnu/packages/python-xyz.scm gnu/packages/tls.scm Marius Bakke
2021-06-18profiles: Add "XAUTHORITY" to the precious variables....Suggested by Maxime Devos <maximedevos@telenet.be>. * guix/profiles.scm (%precious-variables): Add "XAUTHORITY". Ludovic Courtès
2021-06-18profiles: Add 'load-profile'....* guix/profiles.scm (%precious-variables): New variable. (purify-environment, load-profile): New procedures. * guix/scripts/environment.scm (%precious-variables) (purify-environment, create-environment): Remove. (launch-environment): Call 'load-profile' instead of 'create-environment'. * tests/profiles.scm ("load-profile"): New test. Ludovic Courtès
2021-06-12profiles: Move some of the work to the build side....When running: guix environment --ad-hoc gnome --no-grafts --search-paths this reduces wall-clock time by ~5%. The number of object cache lookups goes down from 96K to 89K. (Note that 'gnome' is an interesting example because it has many propagated inputs, which themselves have propagated inputs too, which would lead to a long input list and a long manifest in the 'profile-derivation' gexp.) * guix/profiles.scm (profile-derivation)[inputs, search-paths]: Remove. [extra-inputs]: New variable. [builder]: Adjust call to 'build-profile'. * guix/build/profiles.scm (manifest-sexp->inputs+search-paths): New procedure. (build-profile): Remove 'inputs' parameter; make 'manifest' the 2nd positional parameter and add #:extra-inputs. Call 'manifest-sexp->inputs+search-paths' to obtain 'inputs' and 'search-paths'. Ludovic Courtès
2021-06-06Merge branch 'master' into core-updates... Conflicts: gnu/local.mk gnu/packages/algebra.scm gnu/packages/bioinformatics.scm gnu/packages/curl.scm gnu/packages/docbook.scm gnu/packages/emacs-xyz.scm gnu/packages/maths.scm gnu/packages/plotutils.scm gnu/packages/python-web.scm gnu/packages/python-xyz.scm gnu/packages/radio.scm gnu/packages/readline.scm gnu/packages/tls.scm gnu/packages/xml.scm gnu/packages/xorg.scm Marius Bakke
2021-06-05profiles: 'check-for-collisions' filters out more non-collisions upfront....When running: GUIX_PROFILING="gc object-cache" ./pre-inst-env \ guix install gnome -p /tmp/sdsdfsd --no-grafts -n this reduces the number of object cache lookup from 115K to 96K, with a slight CPU and memory usage reduction as well. * guix/profiles.scm (check-for-collisions)[candidates]: Exclude entries if their 'item' fields are eq?. Ludovic Courtès
2021-05-20guix: Build texlive-configuration only when texlive-base is present....Fixes <https://bugs.gnu.org/48519>. * guix/profiles.scm (texlive-configuration): Build only if texlive-base is present in the profile's manifest. Ricardo Wurmus
2021-05-09Merge branch 'master' into core-updates... Conflicts: gnu/local.mk gnu/packages/bioinformatics.scm gnu/packages/django.scm gnu/packages/gtk.scm gnu/packages/llvm.scm gnu/packages/python-web.scm gnu/packages/python.scm gnu/packages/tex.scm guix/build-system/asdf.scm guix/build/emacs-build-system.scm guix/profiles.scm Marius Bakke
2021-05-05profiles: texlive-configuration: Handle updmap.cfg conflict....The profile hook would fail when preparing an environment for a package using texlive-union, because the union already had a updmap.cfg file. Reported-by: Lars-Dominik Braun <ldb@leibniz-psychology.org>. * guix/profiles.scm (texlive-configuration): Delete updmap.cfg if it exists. Ricardo Wurmus
2021-05-03profiles: texlive-configuration: Refresh font maps....* guix/profiles.scm (texlive-configuration): Run updmap to generate font maps necessary for pdflatex and other tools. Ricardo Wurmus
2021-05-01profiles: Add hook for Emacs subdirs....* guix/profiles.scm (emacs-subdirs): New variable. (%default-profile-hooks): Add it here. * guix/status.scm (hook-message): Add a message for emacs-subdirs. Leo Prikler
2021-03-06Merge branch 'master' into core-updatesChristopher Baines
2021-03-05profiles: 'package->manifest-entry' preserves transformations by default....Previously, transformations applied from a manifest (rather than via "guix install") would be lost. This change fixes that and simplifies things. Reported by zimoun at <https://lists.gnu.org/archive/html/guix-devel/2021-02/msg00153.html>. * guix/profiles.scm (default-properties): New procedure. (package->manifest-entry): Use it for #:properties. * guix/scripts/pack.scm (guix-pack)[with-transformations]: Remove. Remove caller. * guix/scripts/package.scm (transaction-upgrade-entry): Remove calls to 'manifest-entry-with-transformations'. * tests/guix-package.sh: Add test. * tests/transformations.scm ("options->transformation + package->manifest-entry"): New test. Ludovic Courtès
2021-02-03Merge branch 'master' into core-updatesChristopher Baines
2021-02-01profiles: Add 'manifest->code'....* guix/profiles.scm (manifest->code): New procedure. * tests/profiles.scm ("manifest->code, simple") ("manifest->code, simple, versions") ("manifest->code, transformations"): New tests. Ludovic Courtès
2021-01-29gnu: texlive-bin: Enable the use of multiple TeX Live trees....Attempting to compose multiple TeX Live trees (such as can happen when using a texlive-union generated package) proved problematic; only the texmf.cnf configuration file from the union would be honored, causing other TeX Live components to be ignored. This change does away with TeX Live unions, instead relying on the default texmf.cnf configuration file provided by the texlive-bin package to honor individual TeX Live trees referred to via the newly introduced GUIX_TEXMF variable, and replacing the texlive-union procedure by texlive-updmap.cfg, to explicit that generating the fonts map configuration is now its sole purpose. * gnu/packages/tex.scm (texlive-bin)[phases]{customize-texmf}: New phase. {postint}: Move the patching of the texmf.cnf file to the new above phase. Patch the updmap.pl script to find its Perl modules. [native-search-paths]: Rename the TEXMF variable to GUIX_TEXMF. Remove the TEXMFCNF variable. * guix/profiles.scm (texlive-configuration): Remove procedure. (%default-profile-hooks)[texlive-configuration]: Unregister hook. (texlive-union): Alias to what has moved to... (texlivke-updmap.cfg): ... here. Update doc. Do not provide a different texmf.cnf configuration. [inherit]: Do not inherit from texlive-base. [build-system]: Switch to the copy-build-system. [arguments]{install-plan}: New argument. [phases]{regenerate-updmap.cfg}: New phase, which keeps only the fonts map generating code from the previous builder code. [inputs]: Remove bash, and move to ... [propagated-inputs]: ... here. [native-inputs]: Remove field, and move the source of the base updmap.cfg file to... [source]: ... here. [synopsis]: Update. [description]: Likewise. [license]: Delete duplicates. Maxim Cournoyer
2020-12-07profiles: Delete duplicate manifest entries in packages->manifest....* gnu/profiles.scm (packages->manifest): Delete duplicate entries. * tests/profiles.scm ("packages->manifest, no duplicates"): New test. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Leo Prikler
2020-12-07profiles: Remove duplicates in manifest transactions....Fixes <https://bugs.gnu.org/23874>. Reported by Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>. * guix/profiles.scm (manifest-transaction-effects): Delete duplicates in install and remove. Let multiple upgrades and downgrades shadow previous transactions of the same kind. * tests/profiles.scm ("manifest-transaction-effects no double install or upgrades") ("manifest-transaction-effects no double downgrade") ("manifest-transaction-effects no double removal"): New tests. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Leo Prikler
2020-11-02profiles: Add fast path for 'xdg-mime-database' hook....Partly fixes <https://bugs.gnu.org/44053>. Reported by Joshua Branson <jbranso@dismail.de> and Maxim Cournoyer <maxim.cournoyer@gmail.com>. * guix/profiles.scm (xdg-mime-database): When PKGDIRS contains only one element, symlink directly to it. Invoke 'update-mime-database' only when PKGDIRS contains two or more elements, which is less frequent. Ludovic Courtès
2020-08-25linux-libre: Support module compression....This commit adds support for GZIP compression for linux-libre kernel modules. The initrd modules are kept uncompressed as the initrd is already compressed as a whole. The linux-libre kernel also supports XZ compression, but as Guix does not have any available bindings for now, and the compression time is far more significant, GZIP seems to be a better option. * gnu/build/linux-modules.scm (modinfo-section-contents): Use 'call-with-gzip-input-port' to read from a module file using '.gz' extension, (strip-extension): new procedure, (dot-ko): adapt to support compression, (ensure-dot-ko): ditto, (file-name->module-name): ditto, (find-module-file): ditto, (load-linux-module*): ditto, (module-name->file-name/guess): ditto, (module-name-lookup): ditto, (write-module-name-database): ditto, (write-module-alias-database): ditto, (write-module-device-database): ditto. * gnu/installer.scm (installer-program): Add "guile-zlib" to the extensions. * gnu/machine/ssh.scm (machine-check-initrd-modules): Ditto. * gnu/services.scm (activation-script): Ditto. * gnu/services/base.scm (default-serial-port): Ditto, (agetty-shepherd-service): ditto, (udev-service-type): ditto. * gnu/system/image.scm (gcrypt-sqlite3&co): Ditto. * gnu/system/linux-initrd.scm (flat-linux-module-directory): Add "guile-zlib" to the extensions and make sure that the initrd only contains uncompressed module files. * gnu/system/shadow.scm (account-shepherd-service): Add "guile-zlib" to the extensions. * guix/profiles.scm (linux-module-database): Ditto. Mathieu Othacehe
2020-08-24Use "guile-zlib" and "guile-lzlib" instead of (guix config)....* Makefile.am (MODULES): Remove guix/zlib.scm and guix/lzlib.scm, (SCM_TESTS): remove tests/zlib.scm, tests/lzlib.scm. * build-aux/build-self.scm (make-config.scm): Remove unused %libz variable. * configure.ac: Remove LIBZ and LIBLZ variables and check instead for Guile-zlib and Guile-lzlib. * doc/guix.texi ("Requirements"): Remove zlib requirement and add Guile-zlib and Guile-lzlib instead. * gnu/packages/package-management.scm (guix)[native-inputs]: Add "guile-zlib" and "guile-lzlib", [inputs]: remove "zlib" and "lzlib", [propagated-inputs]: ditto, [arguments]: add "guile-zlib" and "guile-lzlib" to Guile load path. * guix/config.scm.in (%libz, %liblz): Remove them. * guix/lzlib.scm: Remove it. * guix/man-db.scm: Use (zlib) instead of (guix zlib). * guix/profiles.scm (manual-database): Do not stub (guix config) in imported modules list, instead add "guile-zlib" to the extension list. * guix/scripts/publish.scm: Use (zlib) instead of (guix zlib) and (lzlib) instead of (guix lzlib), (string->compression-type, effective-compression): do not check for zlib and lzlib availability. * guix/scripts/substitute.scm (%compression-methods): Do not check for lzlib availability. * guix/self.scm (specification->package): Add "guile-zlib" and "guile-lzlib" and remove "zlib" and "lzlib", (compiled-guix): remove "zlib" and "lzlib" arguments and add guile-zlib and guile-lzlib to the dependencies, also do not pass "zlib" and "lzlib" to "make-config.scm" procedure, (make-config.scm): remove "zlib" and "lzlib" arguments as well as %libz and %liblz variables. * guix/utils.scm (lzip-port): Use (lzlib) instead of (guix lzlib) and do not check for lzlib availability. * guix/zlib.scm: Remove it. * m4/guix.m4 (GUIX_LIBZ_LIBDIR, GUIX_LIBLZ_FILE_NAME): Remove them. * tests/lzlib.scm: Use (zlib) instead of (guix zlib) and (lzlib) instead of (guix lzlib), and do not check for zlib and lzlib availability. * tests/publish.scm: Ditto. * tests/substitute.scm: Do not check for lzlib availability. * tests/utils.scm: Ditto. * tests/zlib.scm: Remove it. Mathieu Othacehe
2020-07-25utils: Move '&fix-hint' to (guix diagnostics)....* guix/utils.scm (&fix-hint): Move to... * guix/diagnostics.scm (&fix-hint): ... here. * gnu.scm: Adjust imports accordingly. * gnu/system/mapped-devices.scm: Likewise. * guix/channels.scm: Likewise. * guix/profiles.scm: Likewise. * guix/scripts/system/reconfigure.scm: Likewise. * guix/ssh.scm: Likewise. Ludovic Courtès
2020-06-18profiles: 'linux-module-database' hooks gracefully handles module-less kernels....Fixes <https://bugs.gnu.org/41924>. * guix/profiles.scm (linux-module-database)[build]: Arrange so 'directory-entries' always returns a list. Add 'match' clause for the empty list. Co-authored-by: Ivan Kozlov <kanichos@yandex.ru> Ludovic Courtès
2020-06-18profiles: Reindent 'linux-module-database'....* guix/profiles.scm (linux-module-database): Reindent. Ludovic Courtès
2020-06-14lint: Add 'check-for-collisions' checker....Suggested by Edouard Klein <edk@beaver-labs.com>. * guix/profiles.scm (check-for-collisions): Export. * guix/lint.scm (check-profile-collisions): New procedure. (%local-checkers): Add 'profile-collisions' checker. * tests/lint.scm ("profile-collisions: no warnings") ("profile-collisions: propagated inputs collide") ("profile-collisions: propagated inputs collide, store items"): New tests. * doc/guix.texi (Invoking guix lint): Document it. Ludovic Courtès
2020-06-14profiles: Fix pathological performance of 'manifest-transitive-entries'....For packages with lots of propagated inputs, 'manifest-transitive-entries', as called from 'check-for-collisions', would exhibit pathological behavior. For example, "guix install cl-ana" wouldn't complete in 1mn; now, it's down to 20s. The issue was that manifest entries would never be 'equal?' due to the delayed field in <manifest-entry>. * guix/profiles.scm (manifest-transitive-entries): Use a vhash instead of a set. Use 'manifest-entry=?' instead of 'equal?' when checking for equality. Ludovic Courtès
2020-05-02Merge branch 'master' into core-updatesMarius Bakke
2020-05-01profiles: Mark manual database as non-substitutable....Fixes <https://bugs.gnu.org/40381>. Reported by pkill9 <pkill9@runbox.com>. * guix/profiles.scm (manual-database): Pass #:substitutable? #f. Ludovic Courtès
2020-04-30Merge branch 'master' into core-updates... Conflicts: gnu/local.mk gnu/packages/backup.scm gnu/packages/emacs-xyz.scm gnu/packages/guile.scm gnu/packages/lisp.scm gnu/packages/openldap.scm gnu/packages/package-management.scm gnu/packages/web.scm gnu/packages/xorg.scm Marius Bakke
2020-04-26profiles: Add lowerable <profile> record type....* guix/profiles.scm (<profile>): New record type. * tests/profiles.scm ("<profile>"): New test. Ludovic Courtès
2020-04-23Merge branch 'master' into core-updates... Conflicts: etc/news.scm gnu/local.mk gnu/packages/bootloaders.scm gnu/packages/linphone.scm gnu/packages/linux.scm gnu/packages/tls.scm gnu/system.scm Marius Bakke
2020-04-22profiles: Add #:name parameter to 'profile-derivation'....* guix/profiles.scm (profile-derivation): Add #:name and pass it to 'gexp->derivation'. Ludovic Courtès
2020-04-08Merge branch 'master' into core-updates... Conflicts: etc/news.scm gnu/local.mk gnu/packages/check.scm gnu/packages/cross-base.scm gnu/packages/gimp.scm gnu/packages/java.scm gnu/packages/mail.scm gnu/packages/sdl.scm gnu/packages/texinfo.scm gnu/packages/tls.scm gnu/packages/version-control.scm Marius Bakke
2020-03-31profiles: Compute manual database entries in parallel....This provides a 36% speedup on an SSD and 4 cores for the 1.5K man pages in the manual database derivation of: guix environment --ad-hoc jupyter python-ipython python-ipykernel * guix/profiles.scm (manual-database)[build]: Add 'print-string', 'print', and 'compute-entry'. Change 'compute-entries' to call 'compute-entry' in 'n-par-map'. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Arne Babenhauserheide
2020-03-31guix package: Do not misdiagnose upgrades when there are propagated inputs....Fixes <https://bugs.gnu.org/35872>. Reported by Andy Tai <atai@atai.org>. * guix/profiles.scm (list=?, manifest-entry=?): New procedures. * guix/scripts/package.scm (transaction-upgrade-entry): In the '=' case, use 'manifest-entry=?' to determine whether it's an upgrade. * tests/packages.scm ("transaction-upgrade-entry, zero upgrades, propagated inputs"): New test. Ludovic Courtès