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2017-05-28scripts: Set thread names....This allows 'guix publish' threads as well as 'guix substitute' and 'guix offload' processes to be properly labeled in 'top', 'pstree', etc. * guix/workers.scm (worker-thunk): Add #:thread-name parameter and honor it. (make-pool): Likewise. * guix/scripts/publish.scm (http-write): Add calls to 'set-thread-name' in bodies of 'call-with-new-thread'. (guix-publish): Call 'set-thread-name'. Pass #:thread-name to 'make-pool'. * guix/scripts/offload.scm (guix-offload): Call 'set-thread-name'. * guix/scripts/substitute.scm (guix-substitute): Likewise. Ludovic Courtès
2017-05-28syscalls: Add 'thread-name' and 'set-thread-name'....* guix/build/syscalls.scm (PR_SET_NAME, PR_GET_NAME) (%max-thread-name-length): New variables. (%prctl, set-thread-name, thread-name): New procedures. * tests/syscalls.scm ("set-thread-name"): New test. Ludovic Courtès
2017-05-28build-system: Add 'font-build-system'....* Makefile.am (MODULES): Add 'guix/build-system/font.scm' and 'guix/build/font-build-system.scm'. * guix/build-system/font.scm: New file. * guix/build/font-build-system.scm: New file. * doc/guix.texi (Build Systems): Add 'font-build-system'. Arun Isaac
2017-05-25build-system: gnu: Fix cross-gcc call....This is a follow-up to 7b3318e34f4e2743254a88b908859901db960e9a. * guix/build-system/gnu.scm (standard-cross-packages): Use keyword arguments in cross-gcc call. Ricardo Wurmus
2017-05-25pull: Catch '&missing-dependency-error' raised by 'source-module-closure'....Fixes <http://bugs.gnu.org/26987>. Reported by Mathieu Othacehe <m.othacehe@gmail.com>. * guix/build/pull.scm (depends-on-guile-ssh?): Remove. (has-all-its-dependencies?): New procedure. (build-guix): Use it to filter source files. Ludovic Courtès
2017-05-25modules: Raise an error when a dependency could not be found....* guix/modules.scm (&missing-dependency-error): New error condition. (source-module-dependencies): Raise it when 'search-path' returns #f. * tests/modules.scm ("&missing-dependency-error"): New test. Ludovic Courtès
2017-05-25base64: Turn into a regular Guile module....* guix/base64.scm: Replace 'library' form with 'define-module'. Ludovic Courtès
2017-05-24publish: Do not bake the same item several times....Before this patch, there was a possibility that we'd queue several baking tasks for the same item. The first one would bake the item but subsequent tasks wouldn't check whether the item had been baked in the meantime and would re-bake it. * guix/scripts/publish.scm (render-narinfo/cached): Don't call 'bake-narinfo+nar' when (file-exists? cached). Ludovic Courtès
2017-05-23guix package: Swallow EPIPE upon 'guix package --list-generations'....Fixes <http://bugs.gnu.org/27017>. Reported by Alex Vong <alexvong1995@gmail.com>. * guix/scripts/package.scm (process-query) <'list-generations>: Wrap body in 'leave-on-EPIPE'. Ludovic Courtès
2017-05-23packages: Add aarch64-linux to %supported-systems....* guix/packages.scm (%supported-systems): Add aarch64-linux. (%hydra-supported-systems): Remove aarch64-linux. Efraim Flashner
2017-05-23build-system: emacs: Install only a subset of files....* guix/build/emacs-build-system.scm (install): Install files matching #:include while excluding files matching #:exclude. * guix/build-system/emacs.scm (emacs-build): Add keyword arguments #:include and #:exclude. Arun Isaac
2017-05-23build: emacs: Fix `store-file->elisp-source-file'....This prevents a ".el.el" extension for source files with no version number in their file name. * guix/build/emacs-build-system.scm (store-file->elisp-source-file): Remove ".el" extension from file name before splitting to name and version. Arun Isaac
2017-05-23guix: lint: Slightly simplify `check-source-file-name'....* guix/scripts/lint.scm (check-source-file-name): Implement file name matching with regular expression. Arun Isaac
2017-05-23gnu: lint: Fix typo....* guix/scripts/lint.scm (check-source-file-name): Fix wrong return value in docstring. Arun Isaac
2017-05-22Merge branch 'version-0.13.0'Marius Bakke
2017-05-21guix system: Don't warn about old distros for "guix system init"....* guix/scripts/system.scm (process-action): Don't call 'warn-about-old-distro' when ACTION is 'init' or 'build'. Ludovic Courtès
2017-05-21guix system: Increase image size for 'guix system vm'....This is a followup to 9a1bfe764859365b6726f168da95b88a2d22403b. * guix/scripts/system.scm (system-derivation-for-action): Add 40MiB to the default size for 'vm'. Ludovic Courtès
2017-05-20download: Prune the ImageMagick mirror list....These sites' TLS certificates are invalid. * guix/download.scm (%mirrors) <imagemagick>: Remove mirrors-{au,ru,uk}.go-parts.com. Leo Famulari
2017-05-20pack: Use 'guile2.0-json' when building with Guile 2.0....Fixes <http://bugs.gnu.org/27005>. Reported by Pjotr Prins <pjotr.public12@thebird.nl>. Fixes a regression introduced in commit 2252f087d4bd450ab41a71379320467887edfc0f. * guix/scripts/pack.scm (docker-image)[json]: New variable. [build]: Use it. Ludovic Courtès
2017-05-20pack: Use 'guile2.0-json' when building with Guile 2.0....Fixes <http://bugs.gnu.org/27005>. Reported by Pjotr Prins <pjotr.public12@thebird.nl>. Fixes a regression introduced in commit 2252f087d4bd450ab41a71379320467887edfc0f. * guix/scripts/pack.scm (docker-image)[json]: New variable. [build]: Use it. Ludovic Courtès
2017-05-20modules: Add more source-less modules....* guix/modules.scm (%source-less-modules): New variable. (source-module-dependencies): Use it. Ludovic Courtès
2017-05-20publish: Fix narinfo rendering for already-compressed items....Fixes <http://bugs.gnu.org/26975>. Reported by Mark H Weaver <mhw@netris.org>. * guix/scripts/publish.scm (bake-narinfo+nar): Pass #f as the 2nd argument to 'stat' and properly handle #f. * tests/publish.scm (wait-for-file): New procedure. ("with cache"): Remove 'wait-for-file' procedure. ("with cache, uncompressed"): New test. Ludovic Courtès
2017-05-20union: Gracefully handle dangling symlinks in the input....Fixes <http://bugs.gnu.org/26949>. Reported by Pjotr Prins <pjotr.public12@thebird.nl>. * guix/build/union.scm (file-is-directory?): Return #f when FILE does not exist or is a dangling symlink. (file=?): Pass #f as a second argument to 'stat'; return #f when both ST1 or ST2 is #f. * tests/profiles.scm (test-equalm): New macro. ("union vs. dangling symlink"): New test. Ludovic Courtès
2017-05-20profiles: Add elapsed time to manual-database hook to output message....* guix/profiles.scm (manual-database): Add elapsed time to manual-database hook to output message. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Maxim Cournoyer
2017-05-19modules: Add more source-less modules....* guix/modules.scm (%source-less-modules): New variable. (source-module-dependencies): Use it. Ludovic Courtès
2017-05-18publish: Fix narinfo rendering for already-compressed items....Fixes <http://bugs.gnu.org/26975>. Reported by Mark H Weaver <mhw@netris.org>. * guix/scripts/publish.scm (bake-narinfo+nar): Pass #f as the 2nd argument to 'stat' and properly handle #f. * tests/publish.scm (wait-for-file): New procedure. ("with cache"): Remove 'wait-for-file' procedure. ("with cache, uncompressed"): New test. Ludovic Courtès
2017-05-18lint: inputs-should-be-native: Add "cmake"....Suggested by Nicolas Goaziou <mail@nicolasgoaziou.fr>. * guix/scripts/lint.scm (check-inputs-should-be-native)[input-names]: Add "cmake". Ludovic Courtès
2017-05-18union: Gracefully handle dangling symlinks in the input....Fixes <http://bugs.gnu.org/26949>. Reported by Pjotr Prins <pjotr.public12@thebird.nl>. * guix/build/union.scm (file-is-directory?): Return #f when FILE does not exist or is a dangling symlink. (file=?): Pass #f as a second argument to 'stat'; return #f when both ST1 or ST2 is #f. * tests/profiles.scm (test-equalm): New macro. ("union vs. dangling symlink"): New test. Ludovic Courtès
2017-05-16profiles: Add elapsed time to manual-database hook to output message....* guix/profiles.scm (manual-database): Add elapsed time to manual-database hook to output message. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Maxim Cournoyer
2017-05-16import cran: Check if pkg-config is needed....* guix/import/cran.scm (needs-pkg-config?): New procedure. (description->package): Use it. Ricardo Wurmus
2017-05-16import cran: Refactor "needs-zlib?"....* guix/import/cran.scm (tarball-files-match-pattern?): New procedure. (needs-zlib?): Implement in terms of "tarball-files-match-pattern?". Ricardo Wurmus
2017-05-16import cran: Export package predicates....* guix/import/cran.scm (cran-package?, bioconductor-package?, bioconductor-data-package?, bioconductor-experiment-package?): Export procedures. Ricardo Wurmus
2017-05-16import cran: Add predicate for Bioconductor experiment packages....* guix/import/cran.scm (bioconductor-experiment-package?): New variable. Ricardo Wurmus
2017-05-16import cran: Exclude experiment packages in predicate "bioconductor-package?"....* guix/import/cran.scm (bioconductor-package?): Exclude experiment packages, because they cannot be updated with the default bioconductor updater. Ricardo Wurmus
2017-05-16import cran: Fetch DESCRIPTION files from Github mirror....* guix/import/cran.scm (%bioconductor-svn-url): Remove variable. (bioconductor-mirror-url): New procedure. (fetch-description): Take a REPOSITORY symbol instead of a BASE-URL string. (cran->guix-package): Pass REPOSITORY symbol to "fetch-description". (latest-cran-release, latest-bioconductor-release): Adjust accordingly. (bioconductor-package?): Update comment about SVN. Ricardo Wurmus
2017-05-16build-system/asdf: Handle tests defined in external systems....* guix/build-system/asdf.scm (asdf-build): Add a #:test-asd-file argument. [builder]: Pass it to the build system. (package-with-build-system)[transform]: Strip it from source systems' arguments. * guix/build/asdf-build-system.scm (check): Pass the fully qualified path to it on to the test-system procedure. * guix/build/lisp-utils.scm (test-system): Load the file, or otherwise one of the often used names for it, before running the tests. Adjust the docstring accordingly. Andy Patterson
2017-05-16build-system/asdf: Retain references to source files for binary outputs....In support of long-running programs in which the users would like to be able to jump to the source of a definition of any of the dependencies (itself included) of the program. * guix/build/asdf-build-system.scm (library-outputs): Move from here ... * guix/build/lisp-utils.scm (library-outputs): ... to here. (build-program): Accept dependency-prefixes argument, to allow the caller to specify references which should be retained. Default to the library's output. (build-image): Likewise. (generate-executable): Likewise. * gnu/packages/lisp.scm (sbcl-stumpwm+slynk, sbcl-slynk, sbcl-stumpwm): Adjust accordingly to the new interface. (sbcl-stumpwm+slynk)[native-inputs]: Move to ... [inputs]: ... here. Andy Patterson
2017-05-16build-system/asdf: Simplify the use of lisp-eval-program....Accept a list of statements, each run within its own `--eval' argument. This allows statements to use reader package namespacing after a package has been loaded. * guix/build/lisp-utils.scm (spread-statements): New procedure. (lisp-invoke): Rename to ... (lisp-invocation): ... this. Use spread-statements. Change interface to accept list of statements instead of a single statement. (asdf-load-all-systems): Simplify returned statements. (compile-system): Simplify the program passed to `lisp-eval-program'. (test-system): Likewise. (generate-executable-for-system): Likewise. Accept the full symbol describing the asdf operation to use. (generate-executable): Document the change. (build-program, build-image): Use the new interface. Andy Patterson
2017-05-16build-system/asdf: Handle unusually-named systems....* guix/build/lisp-utils.scm (valid-char-set): New variable. (normalize-string): New procedure. (compiled-system): Truncate the name of a system which contains slashes. (generate-system-definition, make-asd-file): Use `normalize-string' to alter the names of the created system and its dependencies. * guix/build/asdf-build-system.scm (create-asd-file): Normalize the name of the asd file being created. Andy Patterson
2017-05-16build-system/asdf: Always pre-load the system's definition file....* guix/build-system/asdf.scm (asdf-build)[builder]: Pass a default `#:asd-file' argument to the build procedure, using the system's name. * guix/build/asdf-build-system.scm (build, check): Adjust to assume that `asd-file' will always be a string. * guix/build/lisp-utils.scm (compile-system, system-dependencies) (test-system): Likewise. Andy Patterson
2017-05-16build-system/asdf: Pass the system name as an argument to the builder....* guix/build-system/asdf.scm (asdf-build): Use the user-defined system name, or calculate it from the package's full name. [builder]: Pass the value along to the build procedure. (package-with-build-system): Remove #:asd-system-name from source packages' arguments. * guix/build/asdf-build-system.scm: Adjust accordingly. * guix/build/lisp-utils.scm (remove-lisp-from-name): Delete variable. Andy Patterson
2017-05-16build-system/asdf: Parameterize the lisp type and implementation globally....* guix/build-system/asdf.scm (asdf-build)[builder]: Parameterize %lisp-type and %lisp before invoking the build procedure. Don't pass #:lisp-type as an argument to said procedure. * guix/build/asdf-build-system.scm: Adjust accordingly. (source-install-prefix): Rename to %lisp-source-install-prefix. * guix/build/lisp-utils.scm: Adjust accordingly. (%lisp-type): New parameter. (bundle-install-prefix): Rename to %bundle-install-prefix. * gnu/packages/lisp.scm: Adjust accordingly. Andy Patterson
2017-05-16build-system/asdf: Make #:lisp a package argument....* guix/build-system/asdf.scm (lower): Change argument name to `lisp-type'. (asdf-build): Change argument name to `lisp-type'. Remove `lisp' as an argument to the returned procedure. Change the argument passed to build phases to `lisp-type'. * guix/build/asdf-build-system.scm (copy-source, build, check) (create-asd-file, symlink-asd-files, cleanup-files, strip): Respect `lisp-type` argument. * gnu/packages/lisp.scm (sbcl-stumpwm, sbcl-stumpwm+slynk): Likewise. Andy Patterson
2017-05-16build-system/asdf: Keep ecl's generated archive files....This may be necessary to produce programs or images with ecl. * guix/build/asdf-build-system.scm (cleanup-files): Don't delete .a files. Andy Patterson
2017-05-16build-system/asdf: Don't rename inputs....* guix/build-system/asdf.scm (package-with-build-system)[transform]: Use updated `new-inputs' procedure for inputs and native-inputs. <rewrite>: Don't rename inputs. <new-propagated-inputs>: Draw from package-inputs and package-native-inputs for source packages. Use the original package's propagated-inputs otherwise. <new-inputs>: Convert into a function to be used to transform inputs and native-inputs. * gnu/packages/lisp.scm (sbcl-fiveam, sbcl-bordeaux-threads) (sbcl-flexi-streams, sbcl-cl-ppcre, sbcl-stumpwm, sbcl-slynk-arglists) (sbcl-slynk-fancy-inspector): Don't prefix input names. Andy Patterson
2017-05-16build-system/asdf: Use asdf to determine dependencies....This removes the need for conventions to determine which inputs are run-time dependencies, and also the need to specify "special" dependencies. * guix/build/lisp-utils.scm (patch-asd-file, lisp-dependencies) (wrap-perform-method): Remove them. (inputs->asd-file-map, system-dependencies, generate-system-definition) (generate-dependency-links, make-asd-file): New procedures. (lisp-eval-program): Add an error if no lisp matches. (compile-system): Don't use asdf's in-built asd-file generator. Andy Patterson
2017-05-16build-system/asdf: Make it possible to use "lib" as the build output....* guix/build/asdf-build-system.scm (library-output): New procedure. (copy-source, build, check, patch-asd-files, symlink-asd-files) (cleanup-files): Use it. (copy-files-to-output): Rework to take an output instead of an outputs and string pair. (install, copy-source): Use the new method. Andy Patterson
2017-05-16build-system/asdf: Rename %install-prefix to %source-install-prefix....* guix/build/lisp-utils.scm (%install-prefix): Rename to %source-install-prefix. (build-install-prefix): Use it. * guix/build/asdf-build-system.scm (source-install-prefix) (%system-install-prefix, source-directory, copy-source): Likewise. Andy Patterson
2017-05-16scripts: system: Display bootloader name in "list-generations"....* guix/scripts/system.scm (display-system-generation): Display bootloader name. Mathieu Othacehe
2017-05-16scripts: system: Adapt "switch-generation" to new bootloader API....* guix/scripts/system.scm (reinstall-grub): Rename to reinstall-bootloader. Read boot-device and boot-type from parameters file to be able to restore the correct bootloader on specified device. Factorize bootloader installation code by calling install-bootloader. (system-bootloader-name): New procedure. (switch-to-system-generation): Adapt. Mathieu Othacehe