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2020-01-12lint: Check for more packages which should be native....* guix/lint.scm (check-inputs-should-be-native): Add gtk-doc. Danny Milosavljevic
2020-01-12build: asdf-build-system: Improve reproducibility....* guix/build/asdf-build-system.scm (copy-files-to-output): Reset timestamps of source files before compiling. Guillaume Le Vaillant
2020-01-12deprecation: Add a two-element form for simple aliases....* guix/deprecation.scm (define-deprecated): Add a two-element form for simple aliases: (define-deprecated old new). Ludovic Courtès
2020-01-09channels: Provide a hint when the 'guix' channel is lacking....Fixes <https://bugs.gnu.org/39043>. Reported by Jesse Gibbons <jgibbons2357@gmail.com>. * guix/channels.scm (channel-instance-derivations): Raise '&fix-hint' condition in addition to the '&message' condition. Ludovic Courtès
2020-01-09lint: Check for more packages which should be native....* guix/lint.scm (check-inputs-should-be-native): Add autoconf, automake, bison, dejagnu, desktop-file-utils, doxygen, flex, gettext, gobject-introspection, googletest-source, groff, help2man, libtool, swig, qmake, qttools, texinfo, xorg-server-for-tests, yelp-tools. Danny Milosavljevic
2020-01-08build-system/clojure: Provide only the right modules in scope....Previously, we used to have a whole bunch of (guix build *-build-system) modules in scope, which, for example, meant that '%standard-phases' was clashing. This change clarifies it. * guix/build-system/clojure.scm (%default-modules): New variable. (clojure-build): Change the default value of #:modules and that of #:phases. Ludovic Courtès
2020-01-08build: asdf-build-system: Make sbcl-* Lisp packages reproducible....The '*.fasl' files produced by SBCL contain the mtime of the source file (see commit 72843d7ce32bd615f64a0326cf891658b5724ead of SBCL's code repository). As asdf-build-system makes a copy of the source files before compiling them, we must set the mtime of these copies to the same date as the originals for the build to be reproducible. * guix/build/asdf-build-system.scm (copy-files-to-output): Keep the modification time of the original source files. Guillaume Le Vaillant
2020-01-07download, git: Refer to the right module in 'module-use!' call....This fixes a regression introduced in 6a7c4636d4dec47eefa03c95da5a1315bd0e0413. * guix/build/download.scm (load-gnutls): Call 'resolve-module' instead of 'current-module'. * guix/git.scm (load-git-submodules): Likewise. Ludovic Courtès
2020-01-07More module autoload changes....This is a followup to 6a7c4636d4dec47eefa03c95da5a1315bd0e0413. * guix/scripts/build.scm: Adjust #:autoload clauses. * guix/scripts/gc.scm: Likewise. Ludovic Courtès
2020-01-06Adjust module autoloads....In Guile < 2.9.7, autoloading a module would give you access to all its bindings. In future versions, autoloading a module gives access only to the listed bindings, as per #:select (see <https://bugs.gnu.org/38895>). This commit adjusts autoloads to the new semantics, allowing Guix to be built with Guile 2.9.7/2.9.8. * guix/build/download.scm <top level>: Remove call to 'module-autoload!'. (load-gnutls): New procedure. (tls-wrap): Call it. * guix/git.scm <top level>: Remove call to 'module-autoload!'. (load-git-submodules): New procedure. (update-submodules): Call it instead of 'resolve-interface'. * gnu/bootloader/grub.scm: Replace #:autoload with #:use-module. * gnu/packages.scm: Likewise. * gnu/packages/ssh.scm: Likewise. * gnu/packages/tex.scm: Likewise. * gnu/services/cuirass.scm: Likewise. * gnu/services/mcron.scm: Likewise. * guix/lint.scm: Augment list of bindings in #:autoload. * guix/scripts/build.scm: Likewise. * guix/scripts/gc.scm: Likewise. * guix/scripts/pack.scm: Likewise. * guix/scripts/publish.scm: Likewise. * guix/scripts/pull.scm: Likewise. * guix/utils.scm: Remove unnecessary #:autoload clauses; replace one of them with #:use-module. Ludovic Courtès
2020-01-04gexp: Add 'raw-derivation-file'....* guix/gexp.scm (<raw-derivation-file>): New record type. (raw-derivation-file-compiler): New gexp compiler. * tests/gexp.scm ("lower-gexp, raw-derivation-file") ("raw-derivation-file"): New tests. Ludovic Courtès
2020-01-04build-system/guile: Add #:implicit-inputs?....* guix/build-system/guile.scm (lower): Add implicit-inputs? keyword parameter. [private-keywords]: Add it. Honor it. Jan Nieuwenhuizen
2020-01-03import: cran: Fix file descriptor leak....Fixes <https://bugs.gnu.org/38836>. Reported by Ricardo Wurmus <rekado@elephly.net>. * guix/import/cran.scm (bioconductor-packages-list): Close the port returned by 'http-fetch/cached'. (fetch-description): Likewise. Ludovic Courtès
2020-01-03download: Do not leak file descriptors on TLS ports....Fixes <https://bugs.gnu.org/20145>. * guix/build/download.scm (%tls-ports, register-tls-record-port): Remove. (tls-wrap): Remove call to 'register-tls-record-port'. Return a custom binary input/output port instead. This is a backport of what Guile 2.2's (web client) module has been doing. (close-connection): Define as an alias for 'close-port'. * guix/http-client.scm (http-fetch): Remove #:keep-alive? parameter, which was ignored and unused. Pass #:keep-alive? #f to 'http-get'. * guix/lint.scm (probe-uri): Use 'close-port' instead of 'close-connection'. * guix/scripts/substitute.scm (http-multiple-get): Likewise. Ludovic Courtès
2020-01-03gexp: 'gexp->script' marks its result as non-offloadable and non-substitutable....* guix/gexp.scm (gexp->script): Pass #:local-build? and #:substitutable? to 'gexp->derivation'. Ludovic Courtès
2020-01-03gnu: uglify-js: Move back next to sbcl-cl-uglify-js definition....This fixes the bug which prevented uglify-js from being defined properly, and cascaded back to all Common Lisp packages. * gnu/packages/bioinformatics.scm: Replace javascript module with lisp-xyz. * gnu/packages/cran.scm: Use lisp-xyz module. * gnu/packages/javascript.scm (uglify-js): Move from here... * gnu/packages/lisp-xyz.scm: ... To here. * gnu/packages/web.scm: Replace javascript module with lisp-xyz. * guix/build-system/minify.scm: Find uglify-js in the lisp-xyz module. Pierre Neidhardt
2020-01-02ui: It's 2020 now!...* guix/ui.scm (show-version-and-exit): Change year to 2020. Ludovic Courtès
2019-12-30import: crate: Honor crate version for recursive imports....Fixes <https://bugs.gnu.org/38709>. Reported by Valentin Ignatev <valentignatev@gmail.com>. * guix/import/crate.scm (crate-recursive-import): Add optional 'version' parameter and honor it. * guix/scripts/import/crate.scm (guix-import-crate): Pass VERSION as 2nd argument to 'crate-recursive-import'. Ludovic Courtès
2019-12-29profiles: Fix profile-derivation cross-compilation....* guix/store.scm (current-target-system): New exported monadic procedure. * guix/profiles.scm (profile-derivation): Set target at bind time using the above procedure. Mathieu Othacehe
2019-12-29inferior: Add 'inferior-package-provenance'....* guix/inferior.scm (inferior-package-provenance): New procedure. Ludovic Courtès
2019-12-29pack: Save provenance information when using '--manifest'....* guix/scripts/pack.scm (guix-pack)[manifest-from-args]: Remove 'provenance', and add 'with-provenance' procedure. Wrap 'cond' form in 'with-provenance'. Ludovic Courtès
2019-12-29guix package: Save provenance information when using '--manifest'....Fixes <https://bugs.gnu.org/38673>. Reported by zimoun <zimon.toutoune@gmail.com>. * guix/describe.scm (manifest-entry-with-provenance): New procedure. * guix/scripts/package.scm (process-actions): Use it when FILES is non-empty. Ludovic Courtès
2019-12-29profiles: Add 'map-manifest-entries'....* guix/scripts/pack.scm (map-manifest-entries): Move to... * guix/profiles.scm (map-manifest-entries): ... here. Ludovic Courtès
2019-12-27guix: emacs-utils: Add emacs-batch-disable-compilation....* guix/build/emacs-utils.scm (emacs-batch-disable-compilation): New procedure. Signed-off-by: Brett Gilio <brettg@gnu.org> Leo Prikler
2019-12-27git: 'commit-difference' takes a list of excluded commits....* guix/git.scm (commit-closure): Add 'visited' optional parameter. (commit-difference): Add 'excluded' optional parameter; pass second argument to 'commit-closure'. * tests/git.scm ("commit-difference, excluded commits"): New test. Ludovic Courtès
2019-12-26download: Enable TLS 1.3....This reverts commit e4ee84202633636b4c8cef4a332f0c74912a3b23. * guix/build/download.scm (tls-wrap): Dot not disable TLS 1.3. Marius Bakke
2019-12-26gnu: Remove squashfs-tools-next....* gnu/packages/compression.scm (squashfs-tools-next): Remove variable. * guix/scripts/pack.scm (squashfs-image, guix-pack): Use squashfs-tools. * tests/pack.scm: Use squashfs-tools. Ricardo Wurmus
2019-12-26build-system: linux-module: Add substitutable keyword....* guix/build-system/linux-module.scm (linux-module-build) Add substitutable keyword. Efraim Flashner
2019-12-26guix: swh: Fix again example URI in comment for <origin>....This is a follow up to 6afea7489b76c8db58d4f389fdbedc7c2b8992bd * guix/swh.scm(<origin>): Write 'https' instead of 'ttps' for the URL. Björn Höfling
2019-12-23build-system: qt: Adjust indentation....* guix/build-system/qt.scm (qt-build, qt-cross-build): Adjust indentation. Hartmut Goebel
2019-12-23build-system: qt: Actually use qt-build-system, not cmake-build-system....When the qt-build-system was created, based on the cmake-build-system, some references to cmake have been missed to be changed. * guix/build-system/qt.scm (qt-build, qt-cross-build)[modules]: Use qt-build-system, not cmake-build-system. [builder]: Call qt-build, not cmake-build. Coauthored-by: Ludovic Courtès <ludo@gnu.org> Hartmut Goebel
2019-12-22gexp: Add system and target support to gexp->file....* guix/gexp.scm (gexp->file): Add system and target arguments and pass them to gexp->derivation and load-path-expression calls, (scheme-file-compiler): adapt accordingly to pass system and target arguments. Mathieu Othacehe
2019-12-21guix system: Honor the build options in 'delete-generations'....Until now, 'guix system delete-generations' would ignore OPTS; for example, it would not enable #:print-extended-build-trace? & co., leading to suboptimal output. * guix/scripts/system.scm (process-command)[with-store*]: New macro. Use it for 'delete-generations', 'switch-generation', and 'roll-back'. Ludovic Courtès
2019-12-20gnupg: 'gnupg-verify*' returns a status symbol....This allows callers to distinguish between signature verification failure and missing key. * guix/gnupg.scm (gnupg-receive-keys): Return true on success. (gnupg-verify*): Check return value of 'gnupg-receive-keys'. Return two values, the first one being a symbol. * guix/upstream.scm (download-tarball): Get the two return values of 'gnupg-verify*', and match on the first one. * gnu/packages/bash.scm (download-patches): Check the first return value of 'gnupg-verify*'. Ludovic Courtès
2019-12-19gnupg: Compile regexps only once....This halves the run time on a large number of subsequent 'gnupg-verify' calls. * guix/gnupg.scm (sigid-rx, goodsig-rx, validsig-rx, expkeysig-rx) (errsig-rx): New variables, lifted from... (gnupg-verify)[status-line->sexp]: ... here. Ludovic Courtès
2019-12-19guix: Fix %hurd-systems list....* guix/packages.scm (%hurd-systems): Replace i585-gnu with i586-gnu. Efraim Flashner
2019-12-18download: Remove ramses.wh2.tu-dresden.de kernel mirror....* guix/download.scm (%mirrors): Remove ramses.wh2.tu-dresden.de, which seems to no longer work. Mark H Weaver
2019-12-18gnupg: 'gnupg-status-missing-key?' returns a fingerprint when possible....Until then, 'gnupg-status-missing-key?' would return a key id. Its user, 'gnupg-verify*', would then fetch a key with that ID from key servers, thus possibly the wrong key (due to key ID collisions). If it did fetch the wrong key, the effect would be a signature verification failure down the path--e.g., in "guix refresh -u". * guix/gnupg.scm (gnupg-verify)[maybe-fingerprint]: New procedure. [status-line->sexp](errsig-rx): Add parenthetical expression at the end. Fetch it and add it to the 'signature-error' sexp. (gnupg-status-missing-key?): Match the whole 'signature-error' sexp and return preferably the fingerprint rather than KEY-ID. (gnupg-receive-keys): Rename 'key-id' parameter to 'fingerprint/key-id'. Ludovic Courtès
2019-12-18gnupg: 'gnupg-status-good-signature?' no longer returns a key ID....Returning a key ID was inconsequential because the only user of 'gnupg-status-good-signature?', (guix upstream) (via 'gnupg-verify*'), would not check the return value as long as it's true. * guix/gnupg.scm (gnupg-status-good-signature?): Return a fingerprint/user pair instead of key-id/user. (gnupg-verify*): Mention it in docstring. Ludovic Courtès
2019-12-18guix: swh: Fix example URI in comment for <origin>....This is a one-character follow-up to 356a79becc4061d158c68718ad169abac1ab672f Reported by Jonathan Brielmaier <jonathan.brielmaier@web.de>. * guix/swh.scm(<origin>): Remove a slash from example URI witin a comment. Björn Höfling
2019-12-18gexp: Allow character literals in GEXP->SEXP....Fixes <https://bugs.gnu.org/38628>. * tests/gexp.scm ("lower-gexp, character literal"): New test. * guix/gexp.scm (gexp->sexp)[self-quoting?]: Add CHAR? to the tested types. * guix/repl.scm (self-quoting?): Likewise. * gnu/tests.scm (marionette-shepherd-service)[self-quoting?]: Likewise. Marius Bakke
2019-12-17swh: Fix API call for getting origin....When using the archival linter, git origins already in the archive where not recognized due to an API change and where repeatedly asked for archival. This is fixed here. * guix/swh.scm (lookup-origin): Fix API URI for getting origin. (<origin>): Fix comment with API URI example. Björn Höfling
2019-12-15guix: Upgrade to Bioconductor 3.10....* guix/build-system/r.scm (bioconductor-uri): Switch to version 3.10. * guix/import/cran.scm (%bioconductor-version): Same. Ricardo Wurmus
2019-12-15base64: Do not use (rnrs)....* guix/base64.scm: Remove #:use-module clauses for (rnrs) and (srfi srfi-13). Add other #:use-module clauses. (fxbit-field): Define as an alias for 'bit-field. (fx=?, fx+, mod): New aliases. (assert): New macro. Ludovic Courtès
2019-12-15challenge: Fix type mismatch when comparing to a local hash....* guix/scripts/challenge.scm (call-with-mismatches)[narinfo1]: When LOCAL-HASH is true, call 'narinfo-hash->sha256' and use 'bytevector=?' instead of 'string=?'. Ludovic Courtès
2019-12-14import: cran: Recognize LGPL 2.1+....* guix/import/cran.scm (string->license): Add case for lgpl2.1+. Ricardo Wurmus
2019-12-13import: utils: Update docstring of 'recursive-import'....This is a followup to 70a8e13277d4a44b89dd9ee2290b98105f0235f1. * guix/import/utils.scm (recursive-import): Update docstring. Ludovic Courtès
2019-12-13emacs-build-system: Ensure the core libraries appear last in the load path....Fixes bug #38568 (see: https://bugs.gnu.org/38568). * guix/build/emacs-build-system.scm (add-source-to-load-path): Ensure the core libraries appear last in the load path. Reported-by: Jelle Licht <jlicht@fsfe.org> Maxim Cournoyer
2019-12-12challenge: Support "--diff=diffoscope"....* guix/scripts/challenge.scm (call-with-nar): New procedure. (narinfo-contents): Express in terms of 'call-with-nar'. (call-with-mismatches, report-differing-files/external): New procedures. (%diffoscope-command): New variable. (%options): Support "diffoscope" and a string starting with "/". * tests/challenge.scm (call-mismatch-test): New procedure. ("differing-files"): Rewrite in terms of 'call-mismatch-test'. ("call-with-mismatches"): New test. * doc/guix.texi (Invoking guix challenge): Document it. Ludovic Courtès
2019-12-12challenge: Add "--diff"....* guix/scripts/challenge.scm (dump-port*): New variable. (archive-contents, store-item-contents, narinfo-contents) (differing-files, report-differing-files): New procedures. (summarize-report): Add #:report-differences and call it. (show-help, %options): Add "--diff". (%default-options): Add 'difference-report' key. (report-differing-files): Parameterize CURRENT-TERMINAL-COLUMNS and pass #:report-differences to 'summarize-report'. * guix/tests/http.scm (%local-url): Add optional argument. (call-with-http-server): Fix docstring typo. * tests/challenge.scm (query-path-size, make-narinfo): New procedures. ("differing-files"): New test. * doc/guix.texi (Invoking guix challenge): Document "--diff". Ludovic Courtès