diff options
| author | Ricardo Wurmus <rekado@elephly.net> | 2021-06-05 08:49:39 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2021-06-05 09:12:40 +0200 |
| commit | f0f839c1240d8d42bab6351ab463d0ca38985e2f (patch) | |
| tree | 7e18ccdf70b06c05f2063bab0bfcde4f461c2c4b | |
| parent | dec096f827eefa2659e6c6ded2f7a1351b5278e2 (diff) | |
gnu: r-deepsnv: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-deepsnv): Update to 1.38.0.
[inputs]: Remove zlib.
[native-inputs]: Add r-knitr.
| -rw-r--r-- | gnu/packages/bioconductor.scm | 8 |
1 files changed, 4 insertions, 4 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 34df07c977..a7b4aded61 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1442,17 +1442,15 @@ biological sequences.") (define-public r-deepsnv (package (name "r-deepsnv") - (version "1.36.0") + (version "1.38.0") (source (origin (method url-fetch) (uri (bioconductor-uri "deepSNV" version)) (sha256 (base32 - "1lbvx9liql8fkb4y020kwpgp61vzg67cy640dc4kybglcw9dx6j0")))) + "0zz56hf417m7bgg2g2wpbaik30pi6h2nam1n5bviqgdn4mv8n0bs")))) (properties `((upstream-name . "deepSNV"))) (build-system r-build-system) - (inputs - `(("zlib" ,zlib))) (propagated-inputs `(("r-biostrings" ,r-biostrings) ("r-genomicranges" ,r-genomicranges) @@ -1461,6 +1459,8 @@ biological sequences.") ("r-summarizedexperiment" ,r-summarizedexperiment) ("r-variantannotation" ,r-variantannotation) ("r-vgam" ,r-vgam))) + (native-inputs + `(("r-knitr" ,r-knitr))) (home-page "https://github.com/gerstung-lab/deepSNV/") (synopsis "Detection of subclonal SNVs in deep sequencing data") (description |