| Age | Commit message (Expand) | Author |
|---|
| 2022-08-31 | gnu: Add r-milor.•••* gnu/packages/bioconductor.scm (r-milor): New variable.
| Ricardo Wurmus |
| 2022-08-29 | gnu: r-keggrest: Update to 1.36.3.•••* gnu/packages/bioconductor.scm (r-keggrest): Update to 1.36.3.
| Efraim Flashner |
| 2022-08-28 | gnu: r-genomeinfodb: Update to 1.32.3.•••* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.32.3.
| Efraim Flashner |
| 2022-08-28 | gnu: r-iranges: Update to 2.30.1.•••* gnu/packages/bioconductor.scm (r-iranges): Update to 2.30.1.
| Efraim Flashner |
| 2022-08-25 | gnu: Add r-scry.•••* gnu/packages/bioconductor.scm (r-scry): New variable.
| Ricardo Wurmus |
| 2022-08-23 | gnu: Add r-organism-dplyr.•••* gnu/packages/bioconductor.scm (r-organism-dplyr): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| Mădălin Ionel Patrașcu |
| 2022-08-23 | gnu: Add r-bladderbatch.•••* gnu/packages/bioconductor.scm (r-bladderbatch): New variable.
| Ricardo Wurmus |
| 2022-08-23 | gnu: Add r-pcaexplorer.•••* gnu/packages/bioconductor.scm (r-pcaexplorer): New variable.
| Mădălin Ionel Patrașcu |
| 2022-08-23 | gnu: Add r-parathyroidse.•••* gnu/packages/bioconductor.scm (r-parathyroidse): New variable.
| Mădălin Ionel Patrașcu |
| 2022-08-14 | gnu: Remove ‘open source’ from package descriptions.•••Also do some (trivial) editing where appropriate.
* gnu/packages/bioconductor.scm (r-anaquin, r-rcppnumerical)
[description]: Remove superfluous ‘open source’.
* gnu/packages/debian.scm (apt-mirror)[description]: Likewise.
Add @acronym{}. Drop obscure Ubuntu for famous Trisquel. Reorder.
* gnu/packages/documentation.scm (scrollkeeper)[description]:
Remove superfluous ‘open systems’. Keep ‘Open Source’ in standard name.
* gnu/packages/engineering.scm (freecad, cura-engine)[description]:
Remove superfluous ‘open source’ and excessive puffery.
* gnu/packages/firmware.scm (make-opensbi-package)
[synopsis]: Remove ‘Open Source’. Use @acronym{}.
[description]: Fix first sentence to follow guidelines. Use @acronym{}.
* gnu/packages/game-development.scm (ioquake3, recastnavigation):
[description]: Remove ‘open source’.
* gnu/packages/graphics.scm (skia)[description]: Likewise.
* gnu/packages/lisp-xyz.scm (sbcl-s-sysdeps)[description]: Likewise.
* gnu/packages/machine-learning.scm (onnx)[description]: Likewise.
Use @acronym{}.
* gnu/packages/ocaml.scm (ocaml-cudf)[description]: Likewise.
| Tobias Geerinckx-Rice |
| 2022-08-14 | gnu: r-bgx: Build without CPU tuning.•••Fixes <https://issues.guix.gnu.org/57210>.
* gnu/packages/bioconductor.scm (r-bgx)[arguments]: Add phase
'do-not-tune-cflags-for-reproducibility to patch configure.ac.
[inputs]: Add boost.
[native-inputs]: Add autoconf and automake.
| Ricardo Wurmus |
| 2022-08-14 | gnu: r-lpsymphony: Build reproducibly.•••* gnu/packages/bioconductor.scm (r-lpsymphony)[arguments]: Add build phase
'make-build-order-reproducible.
| Ricardo Wurmus |
| 2022-08-10 | gnu: r-activepathways: Update to 1.1.1.•••* gnu/packages/bioconductor.scm (r-activepathways): Update to 1.1.1.
| Ricardo Wurmus |
| 2022-08-09 | gnu: Add r-ciara.•••* gnu/packages/bioconductor.scm (r-ciara): New variable.
| Ricardo Wurmus |
| 2022-08-05 | gnu: Add r-biomartr.•••* gnu/packages/bioconductor.scm (r-biomartr): New variable.
| Ricardo Wurmus |
| 2022-08-01 | gnu: Add r-infercnv.•••* gnu/packages/bioconductor.scm (r-infercnv): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| Mădălin Ionel Patrașcu |
| 2022-08-01 | gnu: Add r-muscat.•••* gnu/packages/bioconductor.scm (r-muscat): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| Mădălin Ionel Patrașcu |
| 2022-08-01 | gnu: Add comma after “i.e.” in descriptions.•••* gnu/packages/bioconductor.scm (r-anota)[description]: Add comma after
“i.e.”.
* gnu/packages/code.scm (xenon)[description]: Same.
* gnu/packages/cran.scm (r-crosstalk)[description]: Same.
* gnu/packages/python-xyz.scm (python-radon)[description]: Same.
* gnu/packages/statistics.scm (r-logspline)[description]: Same.
* gnu/packages/suckless.scm (tabbed)[description]: Same.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Paul A. Patience |
| 2022-07-15 | gnu: r-affycompatible: Build reproducibly.•••* gnu/packages/bioconductor.scm (r-affycompatible)[arguments]: Sort XML
elements before generating R code from them.
| Ricardo Wurmus |
| 2022-07-04 | gnu: Add r-dittoseq.•••* gnu/packages/bioconductor.scm (r-dittoseq): New variable.
| Ricardo Wurmus |
| 2022-07-02 | gnu: r-tcgabiolinks: Update to 2.24.3.•••* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.24.3.
| Ricardo Wurmus |
| 2022-07-02 | gnu: r-bionetstat: Update to 1.16.1.•••* gnu/packages/bioconductor.scm (r-bionetstat): Update to 1.16.1.
| Ricardo Wurmus |
| 2022-07-02 | gnu: r-bgeedb: Update to 2.22.3.•••* gnu/packages/bioconductor.scm (r-bgeedb): Update to 2.22.3.
| Ricardo Wurmus |
| 2022-07-02 | gnu: r-ggbio: Update to 1.44.1.•••* gnu/packages/bioconductor.scm (r-ggbio): Update to 1.44.1.
| Ricardo Wurmus |
| 2022-07-02 | gnu: r-rsubread: Update to 2.10.4.•••* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.10.4.
| Ricardo Wurmus |
| 2022-07-02 | gnu: r-biosigner: Update to 1.24.2.•••* gnu/packages/bioconductor.scm (r-biosigner): Update to 1.24.2.
[propagated-inputs]: Add r-multiassayexperiment and r-summarizedexperiment.
| Ricardo Wurmus |
| 2022-07-02 | gnu: r-ropls: Update to 1.28.2.•••* gnu/packages/bioconductor.scm (r-ropls): Update to 1.28.2.
[propagated-inputs]: Add r-multiassayexperiment and r-summarizedexperiment.
| Ricardo Wurmus |
| 2022-07-02 | gnu: r-genomicscores: Update to 2.8.2.•••* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.8.2.
[propagated-inputs]: Add r-httr.
| Ricardo Wurmus |
| 2022-07-02 | gnu: r-clusterprofiler: Update to 4.4.4.•••* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.4.4.
| Ricardo Wurmus |
| 2022-07-02 | gnu: r-batchelor: Update to 1.12.3.•••* gnu/packages/bioconductor.scm (r-batchelor): Update to 1.12.3.
| Ricardo Wurmus |
| 2022-07-02 | gnu: r-matrixgenerics: Update to 1.8.1.•••* gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.8.1.
| Ricardo Wurmus |
| 2022-07-02 | gnu: r-zellkonverter: Update to 1.6.3.•••* gnu/packages/bioconductor.scm (r-zellkonverter): Update to 1.6.3.
| Ricardo Wurmus |
| 2022-07-02 | gnu: r-simplifyenrichment: Update to 1.6.1.•••* gnu/packages/bioconductor.scm (r-simplifyenrichment): Update to 1.6.1.
| Ricardo Wurmus |
| 2022-07-02 | gnu: r-rtracklayer: Update to 1.56.1.•••* gnu/packages/bioconductor.scm (r-rtracklayer): Update to 1.56.1.
| Ricardo Wurmus |
| 2022-07-02 | gnu: r-organismdbi: Update to 1.38.1.•••* gnu/packages/bioconductor.scm (r-organismdbi): Update to 1.38.1.
| Ricardo Wurmus |
| 2022-07-02 | gnu: r-limma: Update to 3.52.2.•••* gnu/packages/bioconductor.scm (r-limma): Update to 3.52.2.
| Ricardo Wurmus |
| 2022-07-02 | gnu: r-ensembldb: Update to 2.20.2.•••* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.20.2.
| Ricardo Wurmus |
| 2022-07-02 | gnu: r-restfulr: Update to 0.0.15.•••* gnu/packages/bioconductor.scm (r-restfulr): Update to 0.0.15.
| Ricardo Wurmus |
| 2022-07-01 | gnu: Add r-antiprofiles.•••* gnu/packages/bioconductor.scm (r-antiprofiles): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| Mădălin Ionel Patrașcu |
| 2022-07-01 | gnu: Add r-annmap.•••* gnu/packages/bioconductor.scm (r-annmap): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| Mădălin Ionel Patrașcu |
| 2022-07-01 | gnu: Add r-anf.•••* gnu/packages/bioconductor.scm (r-anf): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| Mădălin Ionel Patrașcu |
| 2022-07-01 | gnu: Add r-anaquin.•••* gnu/packages/bioconductor.scm (r-anaquin): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| Mădălin Ionel Patrașcu |
| 2022-06-30 | gnu: Add r-amaretto.•••* gnu/packages/bioconductor.scm (r-amaretto): New variable.
| Mădălin Ionel Patrașcu |
| 2022-06-30 | gnu: Add r-amountain.•••* gnu/packages/bioconductor.scm (r-amountain): New variable.
| Mădălin Ionel Patrașcu |
| 2022-06-30 | gnu: r-metap: Update to 1.8.•••* gnu/packages/bioconductor.scm (r-metap): Update to 1.8.
[propagated-inputs]: Add r-mathjaxr and r-qqconf.
| Ricardo Wurmus |
| 2022-06-13 | gnu: r-nbpseq: Update to 0.3.1.•••* gnu/packages/bioconductor.scm (r-nbpseq): Update to 0.3.1.
| Ricardo Wurmus |
| 2022-06-13 | gnu: r-restfulr: Update to 0.0.14.•••* gnu/packages/bioconductor.scm (r-restfulr): Update to 0.0.14.
| Ricardo Wurmus |
| 2022-06-12 | gnu: Add r-deconvr.•••* gnu/packages/bioconductor.scm (r-deconvr): New variable.
| Ricardo Wurmus |
| 2022-06-12 | gnu: r-hdf5array: Update to 1.24.1.•••* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.24.1.
| Ricardo Wurmus |
| 2022-06-12 | gnu: r-universalmotif: Update to 1.14.1.•••* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.14.1.
| Ricardo Wurmus |
