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2023-04-21gnu: bppsuite: Update to 2.4.1....* gnu/packages/bioinformatics.scm (bppsuite): Update to 2.4.1. [source]: Remove the commit and use the release version. Changed to the github repo. [arguments]: Remove the disabled parallel-build. [inputs]: Use list. [home-page]: Changed to github page. Mădălin Ionel Patrașcu
2023-04-21gnu: bpp-popgen: Update to 2.4.1....* gnu/packages/bioinformatics.scm (bpp-popgen): Update to 2.4.1. [source]: Remove the commit and use the release version. Changed to the github repo. [arguments]: Remove the disabled parallel-build. [home-page]: Changed to new host Université Claude-Bernard Lyon 1. Mădălin Ionel Patrașcu
2023-04-21gnu: Add maffilter....* gnu/packages/bioinformatics.scm (maffilter): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu
2023-04-21gnu: Add bpp-phyl-omics....* gnu/packages/bioinformatics.scm (bpp-phyl-omics): New variable. Mădălin Ionel Patrașcu
2023-04-21gnu: Add bpp-seq-omics....* gnu/packages/bioinformatics.scm (bpp-seq-omics): New variable. Mădălin Ionel Patrașcu
2023-04-21gnu: bpp-phyl: Update to 2.4.1....* gnu/packages/bioinformatics.scm (bpp-phyl): Update to 2.4.1. [source]: Remove the commit and use the release version. Changed to the github repo. [arguments]: Remove the disabled parallel-build and out-of-source. [home-page]: Changed to new host Université Claude-Bernard Lyon 1. [synopsis]: Use proper capitalization. Mădălin Ionel Patrașcu
2023-04-21gnu: bpp-seq: Update to 2.4.1....* gnu/packages/bioinformatics.scm (bpp-seq): Update to 2.4.1. [source]: Remove the commit and use the release version. Changed to the github repo. [arguments]: Remove the disabled parallel-build and out-of-source. [home-page]: Changed to new host Université Claude-Bernard Lyon 1. Mădălin Ionel Patrașcu
2023-04-21gnu: bpp-core: Update to 2.4.1....* gnu/packages/bioinformatics.scm (bpp-core): Update to 2.4.1. [source]: Remove the commit and use the release version. Changed to the github stored sources. [arguments]: Remove the disabled parallel-build. [home-page]: Changed to new host Université Claude-Bernard Lyon 1. Mădălin Ionel Patrașcu
2023-04-21gnu: luakit: Further improve style....This is a followup to d3bc56da0475bc643ccb065483c53c6d28cf8e39. * gnu/packages/web-browsers.scm (luakit)[arguments]<#:phases>: Remove unnecessary INPUTS key. [inputs]: Sort alphabetically. Nicolas Goaziou
2023-04-21gnu: luakit: Improve package style....* gnu/packages/web-browsers.scm (luakit)[arguments]<#:tests?>: Properly disable tests instead of deleting CHECK phase. <#:make-flags, #:phases>: Use G-expressions. Remove trailing #T. <#:test-targes>: Add it, for the record. [inputs]: Remove labels. Nicolas Goaziou
2023-04-21gnu: Add alienblaster....* gnu/packages/games.scm (alienblaster): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Yovan Naumovski
2023-04-21gnu: Add clog....* gnu/packages/parallel.scm (clog): New variable. * gnu/packages/patches/clog-fix-shared-build.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Antero Mejr
2023-04-21gnu: a2ps: Update to 4.15.4...* gnu/packages/pretty-print.scm (a2ps): Update to 4.15.4 Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Andy Tai
2023-04-21gnu: kakoune: update to 2022.10.31....* gnu/packages/text-editors.scm (kakoune): Update to 2022.10.31. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Eidvilas Markevičius
2023-04-21gnu: terminator: Update to 2.1.3...* gnu/packages/gnome.scm (terminator): Update to 2.1.3 Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Andy Tai
2023-04-21gnu: wlr-randr: Update to 0.3.0....* gnu/packages/wm.scm (wlr-randr): Update to 0.3.0. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> kiasoc5
2023-04-21gnu: mpdevil: Update to 1.10.2....* gnu/packages/mpd.scm (mpdevil): Update to 1.10.2. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> kiasoc5
2023-04-21gnu: icewm: Update to 3.3.3....* gnu/packages/wm.scm (icewm): Update to 3.3.3. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Andy Tai
2023-04-21gnu: python-txtorcon: Fix build....gnu/packages/python-crypto.scm (python-txtorcon): Fix build failure. [propagated-inputs]: Add PYTHON-PYOPENSSL. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Brendan Tildesley
2023-04-21gnu: wireshark: Update to 4.0.5....* gnu/packages/networking.scm (wireshark): Update to 4.0.5. Nicolas Goaziou
2023-04-21gnu: komikku: Update to 1.17.0....This fixes a version incompatibility with WebkitGTK. * gnu/packages/gnome.scm (komikku): Update to 1.17.0. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Liliana Marie Prikler
2023-04-21gnu: luakit: Update to 2.3.3....* gnu/packages/web-browsers.scm (luakit): Update to 2.3.3 Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Raphaël Mélotte
2023-04-21gnu: emacs-no-littering: Update to 1.3.0....* gnu/packages/emacs-xyz.scm (emacs-no-littering): Update to 1.3.0. [propagated-inputs]: Add EMACS-COMPAT. Nicolas Goaziou
2023-04-21gnu: emacs-embark: Update to 0.22.1....* gnu/packages/emacs-xyz.scm (emacs-embark): Update to 0.22.1. Nicolas Goaziou
2023-04-21gnu: emacs-elfeed-score: Build and install info documentation....* gnu/packages/emacs-xyz.scm (emacs-elfeed-score)[arguments]<#:phases>: Add a phase to build info files. [native-inputs]: Add TEXINFO. Nicolas Goaziou
2023-04-21gnu: emacs-elfeed-score: Update to 1.2.5....* gnu/packages/emacs-xyz.scm (emacs-elfeed-score): Update to 1.2.5. Nicolas Goaziou
2023-04-21gnu: emacs-doom-modeline: Update to 3.4.0....* gnu/packages/emacs-xyz.scm (emacs-doom-modeline): Update to 3.4.0. Nicolas Goaziou
2023-04-21gnu: emacs-buttercup: Update to 1.31....* gnu/packages/emacs-xyz.scm (emacs-buttercup): Update to 1.31. Nicolas Goaziou
2023-04-21gnu: emacs-emms: Update to 15....* gnu/packages/emacs-xyz.scm (emacs-emms): Update to 15. Nicolas Goaziou
2023-04-20gnu: linux-libre 4.14: Update to 4.14.313....* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.313. (linux-libre-4.14-pristine-source): Update hash. Leo Famulari
2023-04-20gnu: linux-libre 4.19: Update to 4.19.281....* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.281. (linux-libre-4.19-pristine-source): Update hash. Leo Famulari
2023-04-20gnu: linux-libre 5.4: Update to 5.4.241....* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.241. (linux-libre-5.4-pristine-source): Update hash. Leo Famulari
2023-04-20gnu: linux-libre 5.10: Update to 5.10.178....* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.178. (linux-libre-5.10-pristine-source): Update hash. Leo Famulari
2023-04-20gnu: linux-libre 5.15: Update to 5.15.108....* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.108. (linux-libre-5.15-pristine-source): Update hash. Leo Famulari
2023-04-20gnu: linux-libre 6.1: Update to 6.1.25....* gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.25. (linux-libre-6.1-pristine-source): Update hash. Leo Famulari
2023-04-20gnu: linux-libre: Update to 6.2.12....* gnu/packages/linux.scm (linux-libre-6.2-version): Update to 6.2.12. (linux-libre-6.2-pristine-source, deblob-scripts-6.2): Update hashes. Leo Famulari
2023-04-20gnu: sbcl-quri: Update to 0.7.0....* gnu/packages/lisp-xyz.scm (sbcl-quri): Update to 0.7.0. Pierre Neidhardt
2023-04-20gnu: Add r-tidygeocoder....* gnu/packages/cran.scm (r-tidygeocoder): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Navid Afkhami
2023-04-20gnu: poke: Update to 3.1....* gnu/packages/engineering.scm (poke): Update to 3.1. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Andy Tai
2023-04-18gnu: borgmatic: Update to 1.7.12....* gnu/packages/backup.scm (borgmatic): Update to 1.7.12. Signed-off-by: Leo Famulari <leo@famulari.name> Fabio Natali
2023-04-18gnu: stellarium: Update to 23.1 [fixes CVE-2023-28371]....Upstream introduced new versioning model <year>.<release> * gnu/packages/astronomy.scm (stellarium): Update to 23.1. Signed-off-by: Leo Famulari <leo@famulari.name> Sharlatan Hellseher
2023-04-18gnu: calcmysky: Update to 0.3.0....* gnu/packages/astronomy.scm (calcmysky): Update to 0.3.0. Signed-off-by: Leo Famulari <leo@famulari.name> Sharlatan Hellseher
2023-04-18gnu: gnutls: Extend test timeout on powerpc-linux....* gnu/packages/tls.scm (gnutls)[arguments]: When building for powerpc-linux add a phase to extend the test timeout. Efraim Flashner
2023-04-18gnu: ultrastar-deluxe: Build with ffmpeg-5....* gnu/packages/games.scm (ultrastar-deluxe)[inputs]: Replace ffmpeg with ffmpeg-5. Efraim Flashner
2023-04-18gnu: guix: Update to 1.4.0-5.286cdf0....* gnu/packages/package-management.scm (guix): Update to 1.4.0-5.286cdf0. Maxim Cournoyer
2023-04-18gnu: samba: Update to 4.18.1 [security fixes]....Fixes CVE-2023-0922 and CVE-2023-0614. * gnu/packages/samba.scm (samba): Update to 4.18.1. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> John Kehayias
2023-04-18gnu: samba: Apply graft, and make graft private....* gnu/packages/samba.scm (samba) [replacement]: Add field. (samba/security-fixes): Renamed from samba/fixed, for clarity. * gnu/packages/samba.scm (samba/pinned): Adjust for graft variable name change. Maxim Cournoyer
2023-04-18gnu: samba: Make the python-cryptography input conditional....* gnu/packages/samba.scm (samba) [arguments]: Conditionally enable self tests in configure phase. [native-inputs]: Conditionally add python-cryptography. * gnu/packages/samba.scm (samba/pinned) [native-inputs]: Likewise. Reported-by: John Kehayias <john.kehayias@protonmail.com> Maxim Cournoyer
2023-04-18gnu: python-pillow/security-fixes: Make graft package private....This fixes the tests/packages.scm test suite, which would have failed its 'fold-available-packages with/without cache' test case due two python-pillow packages having the same name/version. * gnu/packages/python-xyz.scm (python-pillow/security-fixes): Make private. Maxim Cournoyer
2023-04-18gnu: r-dmrseq: Update to 1.18.1....* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.18.1. Ricardo Wurmus
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